Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DCAKD Gene 0 114.44 188.84 378.87 228.93 113.82 220.57 185.27 307.14 213.86 384.80 112.19 57.26 100.52 210.99 212.09 131.59 144.81 303.19 335.62 236.23 164.92 75.42 87.08 2 310604 Transcript 1 16.82 22.27 30.41 35.26 9.71 13.09 28.17 30.40 19.42 45.25 15.38 8.39 47.84 61.41 23.26 20.21 17.10 49.83 19.94 30.98 27.49 12.51 8.97 3 342350 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 452796 Transcript 1 22.82 39.73 44.70 20.46 18.24 98.87 94.66 28.13 35.00 61.28 35.43 0.00 0.00 22.20 34.44 10.19 33.38 55.08 48.00 44.26 8.14 5.64 19.99 5 ER1a ExonRegion 0 69.76 21.99 51.07 14.55 25.04 54.53 46.09 28.45 18.76 54.08 9.63 3.00 5.21 23.21 36.08 28.86 27.95 14.04 45.54 57.98 35.33 10.33 17.26 6 E1a_E3a KnownJunction 0 10.59 8.95 44.08 6.59 0.00 22.66 4.46 16.22 5.99 48.75 2.37 0.00 6.17 29.67 51.05 28.03 24.40 0.00 28.24 11.82 29.47 6.06 0.00 7 E2_Aa NovelBoundary 0 13.04 43.35 19.22 1.86 15.79 104.94 28.04 9.08 23.81 18.29 11.85 0.00 0.00 24.25 14.71 16.41 8.42 30.14 31.81 14.13 5.68 2.51 12.21 8 ER2a ExonRegion 1 17.19 34.92 25.44 11.73 16.79 73.89 68.00 16.00 18.68 37.20 36.33 0.00 0.00 25.57 32.16 7.74 28.51 29.79 40.37 40.57 8.05 8.15 16.76 9 E2_Da NovelBoundary 0 3.78 44.07 21.73 6.79 4.07 52.02 27.95 35.94 9.58 50.77 0.00 0.00 6.49 4.71 4.45 21.36 8.70 136.88 33.41 15.21 8.09 12.06 53.18 10 E2a_E3a KnownJunction 0 28.45 44.53 63.95 29.20 19.69 123.85 121.31 40.25 51.33 85.37 34.54 0.00 0.00 18.84 36.71 12.65 38.24 80.38 55.63 47.94 8.22 3.12 23.22 11 I2 Intron 0 15.52 37.43 43.77 42.84 26.02 31.02 41.39 47.61 35.32 41.95 5.92 9.10 14.29 12.68 22.62 19.64 16.32 61.74 39.43 60.32 20.24 8.61 23.14 12 I2_SR1 SilentIntronRegion 0 25.70 65.29 51.98 56.26 39.95 31.91 56.88 60.01 45.97 55.48 10.85 26.41 19.36 16.52 24.83 27.54 19.33 79.40 49.83 70.63 17.67 6.91 21.48 13 I2_AR2 ActiveIntronRegion 0 24.43 82.76 87.15 87.27 40.22 41.48 62.39 70.91 60.07 63.83 11.13 15.60 12.63 19.96 25.90 24.04 29.14 71.27 53.35 77.38 22.09 10.85 26.10 14 I2_AR3 ActiveIntronRegion 0 40.53 111.24 41.69 52.44 8.09 29.11 50.87 30.08 17.79 17.32 5.85 3.25 3.05 3.17 21.76 17.91 9.57 49.84 38.22 33.99 8.32 14.22 10.94 15 I2_AR7 ActiveIntronRegion 0 9.84 29.75 39.91 36.96 33.24 39.81 55.07 54.40 44.41 53.79 8.19 10.55 23.31 12.59 27.42 18.10 20.09 64.46 41.68 81.33 16.76 5.06 21.70 16 I2_SR4 SilentIntronRegion 0 12.48 26.51 46.87 42.79 22.56 31.63 39.20 48.45 34.80 45.89 4.82 8.22 12.67 13.54 23.35 20.78 17.22 72.75 39.21 63.84 24.58 8.60 25.94 17 I2_AR8 ActiveIntronRegion 0 18.23 34.67 54.00 55.11 32.07 32.69 47.35 63.98 52.30 56.50 9.43 12.30 21.98 17.02 31.63 26.68 19.84 87.71 50.10 69.28 26.79 16.86 31.75 18 I2_SR5 SilentIntronRegion 0 16.65 43.24 39.18 43.17 29.36 34.93 41.45 51.72 32.89 35.55 5.64 7.60 16.28 11.81 21.02 18.23 14.84 51.62 41.53 55.98 19.70 10.11 21.95 19 I2_AR9 ActiveIntronRegion 0 39.60 101.06 53.73 51.00 32.91 32.76 42.57 60.85 39.47 48.85 10.50 7.80 18.19 11.93 29.22 25.42 15.64 74.85 38.88 84.28 25.04 13.59 28.30 20 E3_Aa NovelBoundary 0 52.45 55.98 58.04 67.46 20.20 43.27 61.25 99.11 60.91 64.55 4.05 5.40 6.82 16.60 30.53 45.20 25.81 72.63 74.26 104.63 28.73 5.69 23.05 21 ER3a ExonRegion 0 22.63 72.49 298.96 150.37 47.18 132.11 101.42 222.35 170.22 327.14 107.81 38.12 68.96 157.28 171.89 102.68 112.73 320.73 227.73 283.11 154.65 53.99 68.15 22 E3a_E4a KnownJunction 0 28.52 64.13 363.47 202.77 59.08 151.28 91.37 296.10 203.85 432.88 137.19 37.36 86.68 157.81 134.62 92.71 98.74 362.84 183.82 249.53 215.54 28.04 51.82 23 ER4a ExonRegion 0 83.79 111.87 476.94 239.11 63.88 253.95 176.63 366.32 274.07 519.29 142.25 79.42 130.22 273.97 246.42 122.66 170.93 414.01 256.06 346.41 232.43 78.35 98.31 24 E4a_E5a KnownJunction 1 16.45 26.11 38.50 46.31 4.07 11.53 21.15 36.39 20.54 52.22 10.11 12.60 59.41 64.45 14.71 16.49 12.25 58.20 28.14 22.43 35.15 17.21 0.00 25 E4a_E6a KnownJunction 0 79.87 120.37 529.79 186.96 70.71 256.22 146.93 369.58 337.53 554.11 128.51 130.54 106.00 338.63 214.72 98.52 189.43 388.92 271.44 315.18 260.33 73.85 95.86 26 ER5a ExonRegion 1 17.19 18.42 22.32 24.20 15.35 14.65 35.19 24.41 18.29 38.29 20.66 4.17 36.28 58.37 31.81 23.92 21.95 41.45 11.74 39.53 19.83 7.81 17.94 27 E5_Da NovelBoundary 0 44.16 9.27 48.67 91.63 44.99 23.62 49.64 41.36 29.28 79.57 54.28 12.90 59.74 55.62 70.59 42.47 14.77 104.75 45.37 36.18 24.77 16.59 35.17 28 E6_Aa NovelBoundary 0 10.89 11.77 53.43 72.32 8.49 20.73 52.64 21.32 6.71 48.41 14.32 0.00 0.00 21.37 9.52 14.95 21.32 44.31 33.88 21.92 20.63 3.12 24.24 29 ER6a ExonRegion 0 97.17 125.85 512.37 232.06 59.41 240.89 128.00 408.07 300.62 590.76 147.58 85.56 125.09 349.44 256.66 144.08 202.78 422.29 296.13 377.95 239.70 88.01 88.77 30 E6a_E7a KnownJunction 0 52.16 178.85 514.74 253.38 54.58 272.17 147.11 414.31 294.18 569.50 174.47 53.72 108.27 290.19 251.68 103.65 132.59 369.56 294.22 312.62 195.77 70.23 55.40 31 I6 Intron 0 17.04 33.07 55.57 43.45 33.59 24.47 36.43 47.14 22.39 48.89 5.33 5.78 8.85 18.11 24.31 24.77 17.82 44.81 27.61 36.66 12.90 6.48 12.70 32 I6_AR1 ActiveIntronRegion 0 12.83 35.88 26.45 24.33 12.93 28.12 30.67 9.58 5.43 21.93 5.72 1.53 3.03 24.67 15.59 42.85 15.75 30.30 25.55 33.29 11.34 4.25 9.48 33 I6_AR2 ActiveIntronRegion 0 8.90 30.84 43.16 45.81 18.73 34.99 29.94 40.32 16.11 45.45 7.34 2.47 0.96 21.81 13.85 39.12 27.75 64.60 42.25 43.55 13.72 2.21 12.77 34 I6_SR1 SilentIntronRegion 0 6.88 31.14 51.93 29.83 22.66 12.26 22.84 36.03 21.27 49.12 2.30 2.57 13.92 9.06 23.53 17.14 21.92 63.40 41.86 29.62 16.29 2.93 11.47 35 I6_SR2 SilentIntronRegion 0 8.13 26.13 54.22 36.43 20.35 18.51 29.62 42.71 22.45 45.19 4.53 2.08 4.52 18.79 20.60 26.80 20.48 52.54 24.23 39.12 11.34 6.55 11.26 36 I6_AR6 ActiveIntronRegion 0 22.66 44.95 79.26 63.36 60.07 37.79 53.80 65.24 34.12 67.29 8.90 8.39 16.52 24.79 33.85 39.69 20.52 58.15 33.74 49.23 14.71 8.88 14.88 37 I6_AR10 ActiveIntronRegion 0 31.36 51.79 67.37 62.46 51.76 33.42 48.93 64.59 25.47 60.32 5.82 11.43 11.42 17.21 28.83 25.28 18.67 49.24 38.26 45.82 16.03 8.62 13.37 38 ER7a ExonRegion 0 152.02 266.21 456.86 295.26 159.51 273.49 239.76 378.96 257.26 448.79 131.06 69.47 122.83 248.20 256.87 164.69 173.19 349.16 445.04 251.41 187.60 94.82 106.52 39 IG21_SR7 SilentIntergenicRegion 0 1.75 13.36 16.01 16.77 8.01 7.38 14.28 34.66 8.35 20.20 0.75 1.38 0.91 2.70 10.73 2.59 1.92 20.79 13.93 16.20 7.13 0.00 2.46 40 IG21_AR11 ActiveIntergenicRegion 0 4.26 12.52 25.78 11.01 8.59 11.61 15.64 45.55 12.42 23.47 0.31 4.16 0.00 0.45 5.12 1.02 3.08 33.16 24.77 12.46 16.01 0.52 6.07 41 IG21_AR10 ActiveIntergenicRegion 0 2.40 11.43 25.47 10.97 8.75 7.26 16.36 40.68 16.27 34.00 0.79 0.93 0.82 1.37 4.51 5.34 4.19 25.95 12.24 20.30 5.00 2.78 4.84 42 IG21_SR6 SilentIntergenicRegion 0 1.27 2.12 13.83 4.98 4.49 3.91 5.86 26.17 8.89 19.23 0.52 0.41 0.58 0.98 1.98 1.30 2.45 14.71 9.29 9.80 3.28 0.60 2.62 43 IG21_AR9 ActiveIntergenicRegion 0 0.00 1.72 19.01 7.94 3.98 3.34 3.53 33.92 5.54 15.47 0.69 0.00 0.00 0.72 0.77 0.00 0.00 8.38 3.75 5.34 2.35 0.00 1.57 44 IG21_AR8 ActiveIntergenicRegion 0 2.04 3.36 16.43 2.38 11.69 7.03 4.92 29.19 8.19 15.86 0.54 0.00 0.00 0.32 1.27 0.00 1.60 6.43 7.20 5.76 2.34 0.67 0.00 45 IG21_SR5 SilentIntergenicRegion 0 4.62 1.46 4.19 8.12 28.42 5.27 9.08 23.05 3.93 7.54 0.00 0.00 2.77 0.96 0.00 0.00 0.00 2.39 5.20 5.03 3.29 0.59 2.11 46 IG21_AR7 ActiveIntergenicRegion 0 2.91 3.09 16.65 8.31 14.70 3.93 7.49 38.95 11.84 19.22 0.80 0.00 0.00 0.37 0.89 0.41 0.91 5.42 5.09 2.60 1.49 0.75 1.21 47 IG21_SR4 SilentIntergenicRegion 0 0.89 1.70 7.68 3.89 5.53 3.31 3.16 17.44 7.14 11.25 0.02 0.13 0.08 0.10 0.46 0.14 0.57 4.94 3.96 2.60 1.19 0.42 0.40 48 IG21_AR6 ActiveIntergenicRegion 0 0.00 1.59 14.02 5.45 1.11 6.75 1.87 13.95 9.88 6.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.97 3.88 2.18 0.00 0.00 0.00 49 IG21_AR5 ActiveIntergenicRegion 0 0.85 0.55 9.35 4.84 8.15 5.68 4.24 25.66 10.97 15.78 0.00 0.96 0.00 0.00 0.00 0.00 0.00 9.14 5.97 5.19 0.59 0.00 0.79 50 IG21_SR3 SilentIntergenicRegion 0 1.10 2.87 11.77 9.84 9.95 6.38 4.30 25.17 11.21 17.32 0.00 0.17 0.36 0.17 0.29 0.28 0.78 6.79 7.04 3.90 0.93 0.49 0.28 51 IG21_AR4 ActiveIntergenicRegion 0 0.64 2.54 14.59 7.36 7.59 9.37 4.19 31.29 10.34 16.67 0.73 0.00 0.00 0.40 1.05 1.25 0.75 8.80 4.56 4.39 1.77 1.10 0.22