Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ACSF2 Gene 0 39.14 0.18 6.40 5.78 9.20 7.27 4.09 6.19 7.67 4.14 49.59 29.02 14.00 52.14 43.32 71.93 24.08 0.59 0.14 0.94 64.97 32.05 53.86 2 300441 Transcript 1 3.78 0.00 0.00 3.20 0.00 0.00 0.00 1.93 6.42 4.46 67.44 12.60 6.82 15.13 4.45 4.02 26.09 0.00 0.00 0.00 59.92 8.21 3.50 3 427954 Transcript 0 0.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.34 0.44 0.00 0.00 0.87 2.39 5.99 3.12 0.00 0.00 0.00 0.00 0.00 0.64 4 ER1a ExonRegion 0 18.83 0.00 1.20 0.60 0.59 0.00 0.26 2.38 1.13 1.49 13.35 0.58 0.55 10.34 12.96 19.14 8.47 0.00 0.00 0.94 24.69 4.67 10.23 5 E1a_E2a KnownJunction 0 2.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.02 0.00 0.00 0.00 0.00 0.00 6.49 7.11 0.00 0.00 0.00 0.00 0.00 0.00 6 E1a_E3a KnownJunction 0 3.78 0.00 0.00 3.20 0.00 0.00 0.00 1.93 6.42 4.46 67.44 12.60 6.82 15.13 4.45 4.02 26.09 0.00 0.00 0.00 59.92 8.21 3.50 7 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.31 0.00 0.00 2.60 7.16 7.13 2.24 0.00 0.00 0.00 0.00 0.00 1.92 8 E2_Da NovelBoundary 0 3.78 0.00 1.36 0.00 0.00 0.00 2.12 2.18 0.00 0.00 2.42 16.96 0.00 2.47 6.30 14.78 8.88 0.00 0.00 0.00 0.00 0.00 0.00 9 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER3a ExonRegion 0 6.24 0.00 7.23 2.02 2.62 0.95 1.34 3.21 4.74 3.77 42.05 19.46 4.21 39.00 38.55 73.54 27.06 1.58 0.29 2.21 50.21 27.44 43.82 11 E3a_E4a KnownJunction 0 6.59 0.00 8.31 1.47 3.65 0.00 1.85 0.00 10.53 6.66 32.22 36.46 0.00 49.39 38.94 64.17 29.17 1.95 4.61 0.00 39.04 40.66 64.71 12 ER4a ExonRegion 0 13.81 0.00 8.99 3.00 1.31 3.62 4.30 2.10 9.29 4.60 54.66 23.63 4.04 62.36 47.21 62.00 41.73 0.86 0.81 2.52 65.36 32.51 52.88 13 E4a_E5a KnownJunction 0 33.71 0.00 11.68 1.27 0.00 0.00 0.00 2.14 2.98 2.93 71.70 30.91 19.48 43.20 45.12 65.03 60.21 1.95 0.00 0.00 61.04 32.45 58.56 14 ER5a ExonRegion 0 33.59 0.00 10.01 0.71 0.00 4.08 1.23 1.73 6.24 2.82 71.88 41.69 6.25 79.40 33.96 64.18 48.54 0.00 1.95 0.00 82.35 35.00 59.87 15 E5a_E6a KnownJunction 0 73.94 0.00 9.08 2.66 7.30 12.66 4.50 3.94 13.51 6.04 75.76 51.47 6.82 91.12 28.56 114.76 55.26 0.00 4.61 0.00 107.62 44.64 46.35 16 ER6a ExonRegion 0 38.97 0.00 6.55 4.00 7.42 9.15 3.42 6.97 10.49 3.84 72.93 38.78 25.07 96.11 58.17 119.96 47.54 0.00 0.48 1.09 118.24 43.61 82.62 17 E6a_E7a KnownJunction 0 21.41 0.00 7.33 1.37 7.72 0.00 0.00 10.15 10.91 4.11 57.65 25.06 13.64 69.28 42.90 64.85 21.69 0.00 0.00 2.62 118.74 51.19 78.70 18 ER7a ExonRegion 0 11.45 0.00 3.79 2.50 7.41 7.04 3.64 6.95 8.00 4.05 53.90 28.69 25.54 66.62 51.61 71.13 31.20 0.00 0.00 0.53 98.10 36.75 57.42 19 E7_Da NovelBoundary 0 0.00 0.00 0.00 1.80 0.00 0.00 0.00 2.01 3.04 1.34 17.16 6.30 0.00 14.07 4.45 18.88 8.60 0.00 0.00 0.00 17.11 14.21 3.50 20 E7a_E8a KnownJunction 1 29.49 0.00 5.38 1.33 19.19 16.41 1.68 4.19 12.36 8.68 66.70 37.81 6.82 66.63 29.05 101.00 8.04 0.00 0.00 0.00 71.23 25.72 27.49 21 I7 Intron 0 3.38 0.00 3.45 0.59 0.78 0.00 0.38 0.74 2.14 0.74 8.14 2.70 4.09 7.30 11.68 7.34 7.19 0.00 0.00 0.31 7.69 3.63 5.12 22 I7_AR1 ActiveIntronRegion 0 4.24 0.00 4.32 0.74 0.97 0.00 0.48 0.47 2.68 0.93 9.86 3.39 4.42 8.66 14.27 9.20 8.42 0.00 0.00 0.39 9.24 4.55 5.88 23 E8_Aa NovelBoundary 0 24.75 0.00 1.66 2.06 4.33 0.00 0.00 1.97 3.10 0.00 0.00 12.30 13.64 6.83 0.00 4.27 0.00 0.00 0.00 0.00 2.41 3.12 10.50 24 ER8a ExonRegion 0 27.60 0.00 7.71 2.58 18.40 9.04 4.90 5.89 9.34 4.87 55.03 43.84 21.64 73.95 48.05 112.41 37.51 0.00 0.00 1.13 79.84 37.33 70.63 25 E8a_E9a KnownJunction 0 30.89 0.00 3.93 9.46 38.88 20.39 5.92 6.86 6.02 1.37 86.50 56.72 0.00 78.29 72.44 137.31 20.57 0.00 0.00 0.00 110.77 75.56 134.70 26 ER9a ExonRegion 0 28.45 0.66 5.41 5.97 9.59 7.83 3.48 5.97 10.94 3.48 66.44 29.95 20.10 66.77 49.16 82.49 23.73 0.08 0.00 0.69 84.15 31.33 72.51 27 E9a_E10a KnownJunction 0 33.86 0.00 4.88 6.43 16.89 5.56 0.00 14.58 11.57 2.42 58.49 6.30 19.80 67.04 51.42 63.49 27.21 1.58 0.00 0.00 80.00 42.56 50.71 28 E9a_E11a NovelJunction 0 0.00 0.00 1.51 0.00 0.00 2.44 0.00 0.00 0.00 0.00 9.90 0.00 0.00 9.48 17.80 7.01 0.00 0.00 0.00 0.00 11.37 2.51 7.51 29 ER10a ExonRegion 0 22.64 0.00 4.22 5.33 18.15 2.63 6.07 13.08 6.44 1.45 48.18 38.87 14.99 56.77 53.48 71.17 23.57 1.39 0.00 0.00 72.51 32.07 58.09 30 E10a_E11a KnownJunction 0 32.67 0.00 6.24 7.16 18.08 7.78 14.40 7.31 3.12 4.35 53.43 18.61 13.64 66.28 37.83 59.98 29.73 0.00 0.00 0.00 61.47 14.39 72.30 31 ER11a ExonRegion 0 28.53 0.00 7.30 5.24 14.59 9.12 5.23 6.55 6.87 1.62 50.21 28.28 19.98 62.77 55.84 66.16 33.48 0.00 0.00 0.00 66.88 25.46 61.25 32 E11a_E12a KnownJunction 0 38.08 0.00 9.17 7.19 3.90 2.38 7.99 16.59 4.98 1.67 40.17 36.01 6.82 62.69 77.14 52.04 12.16 0.00 0.00 0.00 64.68 23.70 44.22 33 Ix_SR1 SilentIntronRegion 0 2.63 0.16 0.71 1.03 1.04 0.78 1.60 1.00 1.48 0.55 3.64 0.42 0.90 4.34 3.26 6.25 2.14 0.17 0.00 0.17 13.13 3.50 10.61 34 I11_SR2 SilentIntronRegion 0 12.87 0.00 2.40 2.53 2.48 1.35 2.17 1.84 3.65 1.95 4.29 2.00 0.95 4.19 2.42 9.20 1.63 0.22 0.00 0.00 8.97 5.43 9.48 35 I11_AR3 ActiveIntronRegion 0 12.96 0.00 6.55 3.53 9.42 1.95 2.28 3.71 0.00 0.00 4.57 1.89 0.00 5.24 4.62 14.89 0.62 0.00 0.00 0.00 5.14 12.22 12.11 36 E12_Aa NovelBoundary 0 38.82 0.00 14.22 1.86 0.00 0.00 0.00 1.89 2.78 0.00 0.00 0.00 0.00 0.00 0.00 8.72 0.00 0.00 0.00 0.00 22.98 8.63 19.04 37 ER12a ExonRegion 0 44.09 0.00 5.20 5.17 13.33 6.72 4.11 7.99 8.69 4.02 48.72 29.42 26.75 65.42 43.84 52.98 18.09 1.30 0.00 0.00 72.42 30.25 40.35 38 E12_Da NovelBoundary 0 17.86 0.00 1.69 3.70 0.00 7.33 6.76 4.15 1.27 0.00 12.63 6.30 6.82 12.24 28.18 40.93 4.21 0.00 0.00 0.00 44.11 12.25 20.23 39 E12a_E13a KnownJunction 0 48.75 0.00 6.56 3.73 12.65 10.22 1.68 6.45 11.43 6.29 41.80 43.06 12.99 36.20 40.18 53.15 26.18 0.00 0.00 0.00 70.30 26.45 43.19 40 I12 Intron 0 14.10 0.09 1.76 0.77 1.91 2.38 2.00 3.56 2.01 1.79 6.56 3.74 4.89 9.78 5.57 12.21 3.73 0.23 0.00 0.09 15.79 6.46 12.80 41 I12_AR1 ActiveIntronRegion 0 13.61 0.17 1.30 0.93 2.62 2.39 2.21 3.78 1.97 2.09 6.51 4.81 5.74 10.71 5.79 14.09 4.58 0.45 0.00 0.00 20.18 9.61 14.76 42 I12_SR1 SilentIntronRegion 0 14.67 0.00 2.26 0.60 1.16 2.38 1.78 3.34 2.05 1.48 6.63 2.61 4.01 8.83 5.36 10.26 2.85 0.00 0.00 0.18 11.19 3.15 10.77 43 E13_Aa NovelBoundary 1 38.82 0.00 1.83 5.29 0.00 0.00 2.25 0.00 1.68 1.24 0.00 6.30 6.82 9.48 10.75 31.44 0.00 0.00 0.00 0.00 16.99 6.00 0.00 44 ER13a ExonRegion 0 74.65 0.00 4.51 5.55 15.91 6.33 5.53 8.64 7.26 7.49 55.15 34.52 12.65 58.35 43.88 65.19 16.24 0.62 0.00 0.00 80.17 30.17 62.98 45 E13a_E14a KnownJunction 0 84.53 0.00 7.89 4.63 11.38 19.93 8.52 10.15 8.65 3.81 46.33 6.30 6.33 64.98 66.38 101.00 32.82 0.00 0.00 0.00 70.18 51.62 78.11 46 E14_Aa NovelBoundary 0 28.45 0.00 0.00 0.00 0.00 0.00 3.36 0.00 1.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 3.67 47 ER14a ExonRegion 0 89.45 0.73 7.46 12.22 11.78 19.41 7.80 6.95 8.17 6.75 61.21 31.98 19.06 57.79 59.13 92.16 26.66 0.00 0.00 0.00 77.74 47.60 83.14 48 E14a_E15a KnownJunction 0 63.49 0.00 14.40 23.94 44.48 42.19 22.52 8.17 12.04 7.98 65.12 24.31 18.51 55.68 34.86 74.34 29.83 0.00 0.00 0.00 57.70 30.86 55.66 49 ER15a ExonRegion 0 67.39 0.64 9.45 18.90 18.54 11.76 5.77 8.16 11.26 6.36 69.22 27.22 18.17 57.50 62.10 112.78 18.17 0.15 0.00 1.46 60.95 53.25 59.31 50 E15a_E16a KnownJunction 0 69.27 3.09 11.62 31.26 16.30 4.71 8.21 8.38 21.33 9.35 63.49 36.76 53.24 64.22 71.70 169.19 27.21 1.66 0.00 3.26 51.83 84.13 98.08 51 E16_Aa NovelBoundary 0 17.86 0.00 6.39 3.30 0.00 0.00 0.00 6.16 0.00 0.00 2.05 5.55 0.00 2.12 5.07 0.00 0.00 0.00 0.00 0.00 5.56 3.00 3.50 52 ER16a ExonRegion 0 143.83 0.47 10.35 22.20 23.50 17.94 11.44 11.77 14.53 9.46 105.95 69.90 19.44 73.18 76.36 142.58 41.57 1.85 0.00 1.97 62.69 62.93 121.25 53 E16a_E17a KnownJunction 0 66.53 0.00 11.71 10.75 16.64 9.37 12.19 14.87 11.26 6.18 75.23 71.27 20.45 72.58 58.10 49.47 30.48 0.00 0.00 2.81 53.31 22.53 64.02 54 ER17a ExonRegion 0 50.89 0.31 10.02 7.87 9.09 10.84 5.02 7.96 9.57 4.32 39.46 38.53 12.75 36.43 36.03 67.93 12.58 1.24 0.00 1.37 49.15 35.57 44.72