Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ATP5G1 Gene 0 228.50 312.61 666.74 241.68 338.26 496.76 322.26 260.86 129.22 321.10 746.71 105.63 52.34 627.83 1042.56 584.59 791.28 240.07 266.98 428.82 376.12 198.40 173.54 2 355938 Transcript 1 1629.40 1877.63 1525.32 512.39 1914.77 2886.35 2004.46 379.36 212.32 467.64 2381.92 151.40 91.23 2373.55 3458.69 2497.46 3410.56 731.74 1156.08 1411.04 1342.30 634.99 905.70 3 393366 Transcript 1 19.71 36.49 13.60 8.93 43.65 45.34 48.23 26.38 21.84 50.03 158.91 5.63 4.21 70.12 108.59 126.94 97.07 36.40 56.50 50.28 30.50 11.20 15.07 4 ER1a ExonRegion 1 483.41 687.24 622.51 208.10 588.76 991.08 682.73 176.74 91.69 216.10 870.51 22.36 13.30 705.72 1269.69 939.73 1290.83 343.31 514.87 531.49 561.47 253.09 375.73 5 E1_Da KnownBoundary 0 30.30 5.92 16.68 8.49 22.07 48.04 35.77 12.24 3.94 16.44 21.90 5.25 0.00 55.74 40.42 60.84 28.05 19.98 22.12 9.46 3.03 8.57 16.13 6 E1a_E2a KnownJunction 0 1629.40 1877.63 1525.32 512.39 1914.77 2886.35 2004.46 379.36 212.32 467.64 2381.92 151.40 91.23 2373.55 3458.69 2497.46 3410.56 731.74 1156.08 1411.04 1342.30 634.99 905.70 7 ER1b ExonRegion 1 25.49 41.86 13.72 10.53 38.22 53.89 61.03 21.95 16.34 42.34 160.62 0.00 2.75 108.05 138.06 146.74 96.62 35.53 72.90 56.32 30.98 19.70 18.88 8 E1b_E2a KnownJunction 0 13.93 31.11 13.48 7.33 49.07 36.80 35.42 30.81 27.34 57.73 157.20 11.25 5.68 32.20 79.12 107.15 97.52 37.27 40.10 44.23 30.02 2.69 11.27 9 ER2a ExonRegion 1 856.09 951.42 1132.04 460.88 1208.66 1736.99 1004.36 437.33 219.03 494.17 1736.07 67.20 56.77 1480.93 1963.73 1653.00 2021.59 710.00 583.59 818.97 749.54 497.70 463.93 10 E2a_E3a KnownJunction 1 234.19 218.38 566.39 276.12 292.11 388.36 268.64 295.32 121.79 291.32 326.35 174.21 195.44 101.12 447.99 361.19 335.20 307.17 105.98 207.60 125.47 60.99 85.96 11 I2_AR1 ActiveIntronRegion 0 19.29 23.41 19.86 25.97 22.87 23.32 27.59 19.11 10.01 23.66 24.03 21.16 13.54 45.53 36.30 35.48 29.85 12.46 11.70 26.91 9.65 8.54 10.16 12 ER3a ExonRegion 1 177.11 119.88 773.68 263.75 158.83 181.17 94.26 280.01 146.69 345.37 1068.89 257.99 128.74 342.34 582.71 275.34 1334.32 189.63 191.20 336.50 622.80 70.28 82.79 13 E3_Da NovelBoundary 1 49.71 51.70 63.13 34.79 40.15 56.10 63.15 46.29 9.61 33.15 23.85 29.71 46.43 63.51 34.37 35.38 25.62 9.20 9.51 25.06 13.16 11.02 7.94 14 E3a_E4a KnownJunction 1 110.91 93.67 1424.52 461.38 89.13 115.39 47.83 464.59 216.11 509.73 2128.91 141.65 67.53 735.66 1094.88 514.22 2877.04 228.66 544.67 824.66 1142.70 158.41 188.05 15 I3_AR2 ActiveIntronRegion 1 31.35 41.39 64.78 55.33 52.72 77.22 35.89 59.89 16.86 45.29 32.02 30.07 16.73 56.80 61.08 88.28 29.44 30.61 21.26 28.35 0.54 11.26 28.02 16 I3_SR2 SilentIntronRegion 1 30.64 49.83 84.92 50.92 28.57 57.79 43.93 75.20 20.60 47.93 35.79 23.83 20.75 60.37 57.64 61.87 33.58 25.35 29.96 47.67 12.18 15.41 10.56 17 I3_AR3 ActiveIntronRegion 1 32.56 54.28 86.91 46.13 20.58 27.37 23.63 65.02 15.68 45.52 41.19 12.99 18.04 56.22 70.08 55.33 52.81 34.54 26.46 36.17 11.53 15.39 3.16 18 I3_AR4 ActiveIntronRegion 1 78.89 67.19 88.35 56.60 41.55 33.22 31.00 58.80 19.74 51.77 34.64 29.20 22.53 46.65 71.34 42.48 34.04 36.74 18.55 33.42 13.70 16.10 9.90 19 I3_AR5 ActiveIntronRegion 0 74.26 29.00 45.78 34.22 29.64 13.33 15.53 31.60 11.44 22.68 16.58 5.65 12.23 30.22 40.21 31.72 8.07 23.00 10.42 24.70 11.31 5.84 12.23 20 E4_Aa NovelBoundary 0 157.29 103.01 87.49 50.21 16.21 98.58 50.88 58.16 15.80 42.09 37.38 24.46 34.58 43.85 95.93 35.12 56.10 26.49 28.14 49.66 16.25 26.76 19.72 21 ER4a ExonRegion 0 44.20 159.36 1012.06 381.81 415.23 522.56 320.27 377.28 183.87 473.02 877.75 132.42 52.56 950.81 1749.89 870.14 850.05 362.26 368.22 652.70 437.89 306.48 277.00 22 E4_Da NovelBoundary 0 21.11 33.68 181.57 83.17 61.55 90.86 85.15 50.07 39.44 66.51 49.85 6.30 20.13 46.85 63.79 44.09 23.28 36.23 30.97 58.55 15.26 23.45 7.43 23 E4a_E5a KnownJunction 0 17.63 532.47 935.09 315.28 1298.22 2066.42 1460.11 400.51 179.40 411.98 670.06 116.74 62.17 600.21 1264.23 419.04 621.50 128.59 185.61 511.02 377.15 141.57 173.20 24 I4 Intron 1 44.98 40.07 86.43 47.08 23.26 30.47 22.51 35.83 23.47 49.53 33.23 13.23 17.64 60.50 63.63 82.10 34.43 28.04 27.69 34.53 13.20 28.58 16.45 25 I4_AR1 ActiveIntronRegion 1 45.32 40.38 87.09 47.44 23.44 30.70 22.67 36.10 23.65 49.91 33.48 13.34 17.78 60.94 64.12 82.73 34.70 28.25 27.90 34.79 13.30 28.80 16.58 26 ER5a ExonRegion 0 261.51 360.04 459.51 151.50 177.81 329.84 246.84 216.69 103.56 264.54 457.65 92.27 49.57 420.39 649.41 270.76 367.06 91.20 138.68 283.15 216.06 131.95 53.56