Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MRPL10 Gene 0 71.51 95.70 395.30 193.21 89.77 102.36 81.28 159.01 111.11 284.14 158.89 62.53 73.46 143.33 192.44 136.28 140.45 85.93 154.42 103.25 160.24 77.05 79.76 2 414011 Transcript 0 0.21 2.93 13.51 10.74 3.77 9.63 1.85 9.91 6.10 18.80 2.50 0.00 0.00 4.46 2.90 38.79 6.11 13.51 31.43 2.84 9.96 6.14 17.52 3 421763 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 480901 Transcript 0 0.64 1.07 6.01 9.66 4.95 2.42 3.48 0.68 2.97 4.94 1.53 0.94 1.02 3.91 2.90 6.27 4.36 3.88 0.84 1.82 0.01 0.51 3.88 5 423147 Transcript 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 2.30 1.45 5.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 466016 Transcript 0 7.85 0.01 8.44 2.46 3.65 0.00 5.75 0.99 4.48 7.59 1.68 2.51 3.91 2.96 7.88 7.63 5.51 2.47 4.00 4.34 0.78 1.49 3.06 7 351111 Transcript 0 5.17 2.01 9.16 7.02 6.22 3.88 2.45 7.39 6.66 4.44 4.75 2.31 1.07 2.79 0.95 4.69 5.71 2.16 5.28 1.61 1.49 2.57 2.16 8 290208 Transcript 0 13.36 11.75 21.16 20.44 25.54 27.47 14.47 44.30 49.65 64.45 2.72 10.07 11.09 41.70 22.61 43.23 12.80 13.44 17.78 26.50 7.71 4.93 22.19 9 IG16_AR2 ActiveIntergenicRegion 0 5.22 5.98 3.56 1.02 9.05 3.69 4.02 2.70 10.01 3.77 3.52 0.00 0.00 4.29 3.80 23.32 8.02 1.50 2.96 3.47 5.33 4.07 1.78 10 ER1a ExonRegion 0 0.42 0.41 1.47 0.00 3.21 1.83 3.71 0.35 2.22 0.46 2.32 0.00 0.00 0.97 5.80 1.78 7.92 0.00 0.64 2.55 7.93 2.92 2.35 11 ER1b ExonRegion 1 4.23 2.03 4.90 0.00 17.12 11.37 25.42 1.73 3.95 4.82 18.56 0.00 0.00 4.87 34.23 10.11 53.47 0.00 3.19 12.77 42.75 14.58 5.87 12 ER1c ExonRegion 1 6.35 2.03 5.51 0.00 24.08 14.67 32.44 1.73 4.94 6.31 27.06 0.00 0.00 5.68 49.32 11.89 70.97 0.00 3.19 12.77 53.99 14.58 5.87 13 ER1d ExonRegion 1 8.47 2.03 6.13 0.00 26.76 14.98 38.62 2.30 5.15 9.75 38.98 4.33 0.00 6.50 60.93 11.89 91.32 0.31 4.25 14.54 65.74 18.40 6.36 14 ER1e ExonRegion 1 43.63 78.49 167.77 39.83 91.44 124.02 122.66 24.56 33.95 136.30 186.51 4.63 23.78 30.35 188.84 104.75 372.83 34.88 135.91 52.86 338.60 77.27 75.37 15 E1_Da KnownBoundary 1 3.78 5.79 78.62 33.00 39.47 26.23 22.17 29.82 29.75 88.00 12.32 6.30 20.94 12.07 5.07 56.48 0.00 28.27 25.22 15.02 0.00 2.94 12.46 16 E1a_E2b KnownJunction 1 0.00 5.46 25.55 21.48 4.33 17.43 0.00 19.47 9.98 37.15 2.68 0.00 0.00 7.95 0.00 75.79 4.30 27.03 62.21 3.13 11.98 9.37 32.69 17 E1a_E3a KnownJunction 1 20.45 47.95 323.17 84.80 62.48 94.72 54.50 48.71 44.44 187.93 121.35 0.00 38.15 22.96 47.96 79.38 243.85 48.71 87.44 31.26 181.13 18.19 87.16 18 ER1f ExonRegion 0 11.88 11.53 44.23 20.46 27.03 25.73 19.89 26.56 25.41 67.47 11.07 1.89 7.30 15.83 12.31 20.09 8.15 9.81 19.41 19.58 5.43 1.76 7.39 19 E1_Db NovelBoundary 0 0.00 8.68 60.26 21.24 54.67 17.77 18.90 57.96 76.10 63.99 2.16 0.00 0.00 12.60 11.50 21.02 13.65 27.65 0.00 18.92 2.78 0.00 8.71 20 E1b_E2b KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 2.30 1.45 5.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E1b_E3a KnownJunction 0 2.74 0.00 33.14 15.85 0.00 0.00 0.00 6.37 0.00 53.75 14.48 0.00 12.82 14.42 13.35 11.62 0.00 7.38 18.35 6.14 0.00 0.00 4.18 22 I1 Intron 0 5.87 9.30 25.32 14.92 30.78 26.94 12.48 29.63 25.76 36.72 1.88 11.12 5.28 14.80 7.23 16.90 8.69 7.25 11.48 10.03 4.28 7.22 4.88 23 I1_SR1 SilentIntronRegion 0 5.87 9.30 25.32 14.92 30.78 26.94 12.48 29.63 25.76 36.72 1.88 11.12 5.28 14.80 7.23 16.90 8.69 7.25 11.48 10.03 4.28 7.22 4.88 24 E2_Aa NovelBoundary 1 65.49 72.49 226.40 331.83 70.63 87.85 117.91 223.94 182.09 183.71 22.53 0.00 21.10 5.42 26.82 131.33 45.44 335.48 72.66 103.61 39.91 28.78 52.33 25 ER2a ExonRegion 1 13.36 11.75 21.16 20.44 25.54 27.47 14.47 44.30 49.65 64.45 2.72 10.07 11.09 41.70 22.61 43.23 12.80 13.44 17.78 26.50 7.71 4.93 22.19 26 E2_Ab KnownBoundary 1 55.49 47.03 353.21 248.32 61.12 128.22 68.85 308.22 352.22 254.71 12.79 34.51 40.09 23.02 39.80 31.36 45.35 338.76 79.16 39.25 11.86 8.82 30.47 27 ER2b ExonRegion 1 40.58 33.40 69.08 47.17 36.38 33.14 33.70 101.64 92.20 111.57 17.06 34.73 35.83 33.72 79.47 55.40 30.35 74.01 57.14 53.85 25.56 12.63 30.06 28 E2_Da NovelBoundary 0 99.57 170.43 526.56 516.55 151.10 132.82 216.71 573.52 560.12 449.10 56.54 14.25 30.36 10.30 51.80 109.71 163.16 456.73 113.89 200.89 91.99 69.74 119.76 29 E2a_E3a KnownJunction 0 26.23 9.34 68.36 38.89 8.49 12.66 18.77 56.19 68.72 114.57 13.32 0.00 20.13 16.89 18.54 6.58 27.40 14.22 0.00 32.66 21.19 5.51 7.00 30 ER3a ExonRegion 1 81.25 78.78 452.52 188.44 75.90 73.46 48.23 187.53 157.77 411.64 417.47 39.83 65.25 135.71 217.06 210.08 459.62 142.58 413.63 142.01 485.11 87.10 149.10 31 E3_Da KnownBoundary 0 0.00 0.00 3.05 10.75 0.00 0.00 0.00 0.00 1.13 4.41 0.00 0.00 0.00 0.00 0.00 7.69 0.00 2.11 0.00 2.75 0.00 0.00 0.00 32 E3a_E4a KnownJunction 1 70.53 103.27 735.60 335.56 124.87 80.81 74.50 284.31 207.58 462.86 136.46 49.37 93.34 224.03 327.96 508.33 164.66 229.36 445.66 121.51 192.19 130.55 311.32 33 ER3b ExonRegion 0 0.64 1.07 6.01 9.66 4.95 2.42 3.48 0.68 2.97 4.94 1.53 0.94 1.02 3.91 2.90 6.27 4.36 3.88 0.84 1.82 0.01 0.51 3.88 34 ER4a ExonRegion 0 89.59 190.29 693.72 290.12 194.19 309.25 191.35 240.40 190.70 452.19 251.85 98.65 180.83 225.06 248.80 236.68 188.88 137.92 230.61 149.91 273.06 99.88 143.02 35 E4_Da KnownBoundary 0 86.02 274.23 887.96 379.17 155.69 437.82 352.33 293.19 188.54 550.03 317.34 132.64 197.39 305.61 314.73 177.22 240.49 159.76 302.22 148.29 304.38 153.70 123.69 36 ER4b ExonRegion 0 95.37 272.86 909.37 399.49 153.07 274.10 238.47 293.53 197.55 532.23 330.87 139.18 178.08 298.31 322.21 191.18 241.74 185.54 282.19 174.91 350.78 174.59 119.45 37 E4_Db KnownBoundary 0 12.97 0.00 9.37 3.86 23.51 0.00 7.68 5.05 4.34 9.56 4.74 0.00 6.33 5.12 17.43 13.07 3.83 7.09 7.91 9.52 0.00 0.00 3.24 38 E4b_E5a KnownJunction 0 147.66 355.92 1044.76 470.84 185.31 217.43 195.60 283.37 214.84 527.60 325.29 222.82 246.90 296.66 337.72 195.50 278.92 178.58 272.10 217.89 334.65 190.68 106.53 39 ER4c ExonRegion 0 7.85 0.01 8.44 2.46 3.65 0.00 5.75 0.99 4.48 7.59 1.68 2.51 3.91 2.96 7.88 7.63 5.51 2.47 4.00 4.34 0.78 1.49 3.06 40 ER5a ExonRegion 0 142.14 198.38 950.39 408.33 120.19 154.79 141.29 351.07 221.91 596.49 372.65 227.25 241.16 329.95 385.97 332.39 301.34 230.78 325.70 218.78 344.45 161.32 134.52 41 E5a_E6a KnownJunction 0 185.88 187.27 870.55 337.52 130.05 161.33 139.55 299.51 210.27 608.66 379.99 190.56 201.12 289.19 405.71 230.79 327.91 200.59 267.11 184.40 281.21 165.45 136.58 42 ER6a ExonRegion 0 140.70 190.97 796.82 406.48 177.33 189.76 155.40 310.98 194.82 536.53 277.61 116.00 124.82 281.28 395.68 240.32 217.95 154.89 270.19 198.91 261.24 162.53 145.10 43 E6_Da KnownBoundary 0 63.20 57.29 350.79 212.66 42.36 62.63 29.81 107.08 93.05 284.84 89.86 54.77 68.18 108.54 142.90 63.32 51.71 24.29 32.10 46.34 86.55 65.03 74.95 44 ER6b ExonRegion 0 68.59 47.43 208.66 121.94 42.21 36.70 39.53 59.68 61.40 200.45 90.62 41.29 62.74 110.04 148.62 80.63 73.97 14.92 57.64 47.38 61.75 40.55 55.61 45 E6_Db KnownBoundary 0 188.85 74.53 220.51 124.96 86.59 87.05 83.47 114.19 78.41 203.59 83.76 43.06 26.62 106.19 171.09 29.05 56.66 26.16 104.57 73.57 73.27 41.09 51.90 46 E6_Dc KnownBoundary 0 9.04 12.96 8.25 3.80 16.04 2.33 3.62 6.98 1.79 2.44 4.69 0.00 0.00 22.07 9.39 10.85 16.92 0.00 18.26 0.00 6.24 8.08 10.76 47 ER6c ExonRegion 0 77.29 43.13 80.54 47.61 32.66 34.02 34.83 32.78 36.58 105.32 47.06 23.14 10.67 54.32 79.63 21.21 30.50 11.66 57.12 36.10 37.16 17.96 27.95 48 ER6d ExonRegion 0 5.17 2.01 9.16 7.02 6.22 3.88 2.45 7.39 6.66 4.44 4.75 2.31 1.07 2.79 0.95 4.69 5.71 2.16 5.28 1.61 1.49 2.57 2.16