Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 EME1 Gene 0 21.93 42.85 80.50 42.57 53.65 29.54 71.38 65.99 24.84 136.35 76.40 61.12 33.34 86.34 65.08 94.77 89.08 54.69 19.76 64.19 7.62 7.57 8.95 2 393271 Transcript 0 2.38 2.06 10.28 10.11 8.86 3.28 11.69 6.44 2.10 15.47 6.93 17.16 4.57 12.75 11.61 13.86 15.76 6.84 0.32 11.20 2.89 0.76 0.62 3 338165 Transcript 1 10.00 14.01 79.86 24.81 50.93 17.66 63.46 58.41 18.26 138.04 41.59 30.46 20.29 65.51 32.02 104.25 29.83 50.32 36.42 33.24 5.07 3.12 8.71 4 ER1a ExonRegion 0 14.60 26.81 14.90 9.65 25.61 18.11 48.93 17.39 7.21 30.92 48.99 11.22 13.30 33.61 20.07 96.08 44.33 29.04 15.93 27.62 3.28 5.06 11.93 5 E1a_E2a KnownJunction 1 79.87 143.79 56.15 36.06 137.78 85.58 263.78 65.96 27.52 111.75 201.95 55.37 59.90 153.63 84.43 408.95 205.80 98.74 76.33 145.28 13.84 24.31 53.35 6 E2_Aa NovelBoundary 1 10.00 6.31 7.57 0.00 0.00 0.00 12.50 7.56 3.12 11.01 0.00 6.30 15.75 2.41 4.45 4.02 0.00 1.91 0.00 8.25 0.00 0.00 0.00 7 ER2a ExonRegion 0 16.15 34.18 70.95 39.28 57.42 32.34 84.06 65.21 25.56 145.27 94.20 92.61 46.08 97.42 52.84 118.04 113.12 63.45 27.97 74.43 7.05 9.37 11.48 8 E2_Da NovelBoundary 0 0.00 6.18 32.94 3.03 12.05 5.34 23.14 24.97 5.67 32.29 13.74 24.61 0.00 27.78 26.70 23.84 20.85 25.04 0.00 18.92 0.00 0.00 7.68 9 E2a_E3a KnownJunction 1 14.08 27.30 35.48 32.00 27.84 31.18 71.41 27.56 15.89 81.02 80.02 66.47 6.82 89.29 26.21 92.11 64.89 59.53 37.18 51.33 8.53 2.63 8.11 10 I2 Intron 0 3.95 0.00 1.14 0.00 1.66 1.14 10.70 0.00 1.14 3.19 4.81 4.44 0.00 9.74 13.27 5.55 10.26 0.00 0.00 5.29 0.00 1.30 3.65 11 I2_SR1 SilentIntronRegion 0 4.47 0.00 1.23 0.00 2.17 1.08 12.10 0.00 1.22 3.31 5.77 4.67 0.00 11.01 14.87 5.94 12.00 0.00 0.00 5.91 0.00 1.55 4.71 12 E3_Aa NovelBoundary 0 10.67 0.00 3.02 4.36 0.00 11.13 8.79 8.17 1.33 7.55 10.21 11.70 0.00 12.60 15.20 12.39 21.13 5.60 0.00 5.82 0.00 5.82 4.35 13 ER3a ExonRegion 0 9.39 24.18 49.05 28.72 32.59 30.47 46.03 36.78 15.19 105.12 54.92 33.79 18.03 77.86 56.01 69.89 80.74 50.42 19.41 47.37 4.08 3.74 6.61 14 E3a_E4a KnownJunction 0 3.56 33.28 34.12 27.97 27.50 33.79 47.21 20.54 16.46 88.75 44.70 18.16 0.00 86.88 40.79 64.51 68.63 32.29 4.42 47.17 2.53 2.82 8.28 15 E3a_E5a NovelJunction 0 3.78 0.00 3.19 3.26 4.33 0.00 2.25 0.00 1.22 8.14 2.37 0.00 6.82 26.84 16.69 16.58 12.06 6.43 0.00 2.88 0.00 0.00 0.00 16 E4_Aa NovelBoundary 0 0.00 5.33 2.90 6.66 42.95 4.83 15.90 8.54 5.90 2.58 7.58 0.00 0.00 5.24 0.00 3.85 8.98 12.52 3.86 9.08 3.15 0.00 0.00 17 ER4a ExonRegion 0 12.21 36.93 49.31 31.53 35.68 22.74 49.44 27.85 23.23 114.44 57.59 22.44 12.83 73.46 48.82 79.63 77.29 46.21 16.55 55.12 7.27 7.59 7.70 18 E4a_E5a KnownJunction 0 26.38 58.74 90.30 35.59 18.93 40.54 58.87 51.96 32.49 143.44 50.07 0.00 13.80 85.06 75.78 75.79 84.81 46.64 22.78 51.26 8.77 3.12 8.45 19 E5_Aa NovelBoundary 0 6.96 15.26 12.24 2.03 15.70 2.78 11.26 9.12 14.09 11.09 9.58 0.00 0.00 0.00 4.45 4.36 3.74 14.92 0.00 6.07 0.00 0.00 3.16 20 ER5a ExonRegion 0 17.47 35.07 77.61 34.01 54.02 26.73 67.14 55.55 22.46 132.69 68.52 32.65 25.49 86.21 71.70 88.19 73.86 59.34 15.17 53.96 9.52 2.56 4.57 21 E5_Da NovelBoundary 0 7.56 22.69 36.04 29.40 34.13 13.91 37.32 19.51 12.21 46.23 23.95 34.81 6.82 41.85 13.35 48.53 41.33 34.41 3.86 40.65 5.19 5.51 13.06 22 E5a_E6a KnownJunction 0 0.00 0.00 3.93 3.43 0.00 0.00 5.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.07 0.00 0.00 0.00 23 E5a_E6b KnownJunction 1 10.00 14.01 79.86 24.81 50.93 17.66 63.46 58.41 18.26 138.04 41.59 30.46 20.29 65.51 32.02 104.25 29.83 50.32 36.42 33.24 5.07 3.12 8.71 24 I5 Intron 0 7.53 13.27 15.16 13.25 22.21 7.61 28.27 25.20 9.28 35.98 16.05 5.51 4.42 25.67 10.32 23.79 16.64 18.79 0.94 18.30 3.27 2.47 5.22 25 I5_AR1 ActiveIntronRegion 1 7.62 13.42 15.32 13.40 22.48 7.70 28.60 25.47 9.38 36.40 16.22 5.58 4.47 25.98 10.44 24.06 16.83 19.00 0.96 18.51 3.31 2.50 5.29 26 E6_Aa NovelBoundary 0 0.00 25.46 31.64 32.70 32.17 5.79 42.62 33.64 13.60 43.03 29.32 42.16 0.00 42.56 31.03 47.68 21.60 35.57 0.00 24.86 3.09 8.76 3.59 27 ER6a ExonRegion 1 4.76 4.12 16.63 16.80 17.73 6.56 17.91 12.88 4.20 30.94 13.87 34.31 9.15 25.50 23.21 27.72 31.52 13.67 0.64 16.33 5.78 1.51 1.25 28 E6_Ab KnownBoundary 0 15.85 17.43 31.73 32.60 31.92 15.84 39.61 33.06 8.48 55.04 20.95 38.11 0.00 30.73 31.28 46.48 46.00 25.91 0.00 23.46 10.81 7.23 3.24 29 ER6b ExonRegion 0 19.46 38.15 84.90 43.11 57.11 27.43 76.20 76.32 41.79 166.27 96.94 67.20 28.82 114.60 83.57 122.82 102.24 69.30 25.37 78.54 7.48 7.00 12.57 30 E6_Da NovelBoundary 1 16.82 37.76 19.84 27.84 12.90 2.84 22.96 9.90 7.47 30.22 7.42 44.26 6.01 14.54 0.00 38.71 13.56 16.75 0.00 19.43 2.90 2.94 0.00 31 E6a_E7a KnownJunction 0 20.08 24.67 78.97 35.19 55.09 24.25 60.33 70.48 32.00 139.49 81.44 18.91 45.61 95.59 98.28 72.46 47.41 64.71 12.61 21.28 0.00 6.12 8.02 32 I6 Intron 0 6.18 8.22 24.21 17.34 9.02 4.53 20.82 8.70 5.79 28.80 12.16 14.61 2.79 15.75 8.44 23.37 17.80 8.25 1.43 9.08 2.48 0.94 2.64 33 I6_SR1 SilentIntronRegion 0 6.24 8.30 24.42 17.49 9.10 4.57 20.99 8.78 5.84 29.04 12.26 14.74 2.81 15.88 8.51 23.58 17.96 8.33 1.44 9.16 2.50 0.94 2.66 34 E7_Aa NovelBoundary 0 3.26 9.08 26.20 21.18 21.31 21.69 18.59 9.36 19.13 38.06 16.58 20.26 13.31 12.07 9.89 18.63 13.28 12.89 3.67 21.73 3.15 5.82 3.50 35 ER7a ExonRegion 0 17.72 47.89 63.43 26.93 37.62 41.56 47.29 60.23 27.42 124.81 72.98 53.56 41.24 83.29 78.06 88.81 81.33 63.99 16.23 54.84 7.73 5.15 6.56 36 E7_Da NovelBoundary 0 6.67 17.96 47.25 26.77 18.34 2.61 18.15 38.20 18.72 64.71 49.07 29.26 13.64 18.78 19.78 33.50 31.04 29.72 9.60 37.39 6.18 11.76 0.00 37 E7a_E8a KnownJunction 0 20.97 54.46 56.89 10.49 26.15 30.32 55.16 28.14 13.83 79.19 51.43 63.32 19.64 47.80 95.68 59.81 59.93 16.04 13.27 29.47 2.29 3.12 0.00 38 I7 Intron 0 15.08 16.80 17.52 21.22 29.73 17.59 40.36 26.42 11.36 38.63 30.66 30.60 23.37 35.76 19.04 36.69 27.27 21.12 8.47 27.48 1.47 3.76 3.63 39 I7_AR1 ActiveIntronRegion 0 15.13 16.87 17.58 21.30 29.84 17.66 40.51 26.51 11.40 38.78 30.77 30.72 23.46 35.89 19.12 36.83 27.38 21.20 8.50 27.58 1.47 3.77 3.64 40 E8_Aa NovelBoundary 0 13.48 32.95 10.29 17.85 0.00 27.26 30.03 20.82 11.00 40.24 22.80 24.01 6.82 33.73 39.93 57.68 18.42 22.80 7.44 28.76 0.00 6.25 4.01 41 ER8a ExonRegion 0 53.68 67.89 97.98 42.98 48.95 23.87 69.94 68.40 32.51 150.86 85.23 56.97 37.92 87.51 95.15 96.61 72.95 69.84 13.24 68.08 10.91 7.84 11.75 42 E8a_E9a KnownJunction 0 106.46 84.66 141.01 61.96 69.27 63.54 115.97 90.81 40.77 196.23 71.54 59.87 19.64 101.71 111.87 98.18 66.95 72.50 8.85 88.78 11.68 13.35 7.85 43 E9_Aa NovelBoundary 0 13.04 9.14 27.79 5.89 10.53 0.00 15.32 8.71 3.15 11.12 2.63 0.00 6.82 7.83 0.00 4.36 4.11 6.88 3.76 14.83 6.30 0.00 0.00 44 ER9a ExonRegion 0 26.83 54.82 107.29 57.98 62.79 29.52 73.24 83.92 23.45 141.65 63.87 46.23 26.46 79.44 73.79 75.21 77.10 41.68 14.39 61.85 8.16 8.05 6.65