Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FAM134C Gene 0 18.04 18.08 39.02 32.16 26.92 48.33 35.91 68.28 50.78 88.88 41.12 23.04 32.39 46.67 46.55 63.71 49.89 45.12 35.29 46.10 31.46 25.74 31.77 2 309428 Transcript 0 62.30 64.06 128.81 109.45 96.69 161.92 118.44 242.25 178.96 314.63 147.91 94.79 134.73 161.91 164.42 232.00 188.99 150.66 129.06 168.92 110.23 86.45 112.49 3 ER1a ExonRegion 0 19.44 29.54 32.22 26.93 27.38 64.04 48.01 55.89 43.05 97.64 42.54 8.33 16.66 37.89 47.61 72.09 55.97 54.27 30.27 50.18 34.06 27.87 36.37 4 E1_Da NovelBoundary 0 3.70 2.70 13.66 13.78 3.74 7.72 12.23 24.93 12.99 21.62 0.00 0.00 6.82 2.47 16.07 39.14 22.07 33.99 12.61 20.77 2.90 2.57 24.07 5 E1a_E2a KnownJunction 0 28.30 35.98 78.50 74.58 67.74 81.54 43.32 160.27 122.54 218.33 91.71 30.01 19.97 71.11 70.96 157.48 114.91 114.33 74.07 100.48 63.51 51.62 84.17 6 I1 Intron 0 32.88 17.14 17.70 20.11 38.83 15.12 26.89 32.55 11.29 18.25 6.05 19.17 35.54 8.69 25.05 24.16 17.73 7.44 8.15 20.71 2.29 3.76 6.86 7 I1_AR1 ActiveIntronRegion 0 13.74 9.12 10.85 14.71 15.14 12.90 12.65 32.16 10.24 15.20 8.81 7.55 14.79 8.97 20.60 22.38 21.84 16.41 10.57 27.14 6.08 2.44 9.00 8 I1_SR1 SilentIntronRegion 0 31.87 33.42 22.30 28.38 29.23 12.33 28.99 56.71 20.37 27.71 10.19 43.08 32.70 6.50 27.65 29.04 28.83 12.24 9.53 36.05 0.22 3.57 10.79 9 I1_AR2 ActiveIntronRegion 0 47.67 41.10 16.89 20.19 34.93 9.92 34.82 46.07 13.33 30.23 5.85 33.27 28.75 6.51 30.38 26.25 10.94 4.52 13.51 15.92 2.51 8.11 8.71 10 I1_SR2 SilentIntronRegion 0 29.38 14.82 17.42 11.28 51.06 24.81 37.67 28.15 10.22 16.31 7.38 12.94 37.33 7.70 28.01 39.70 20.61 18.80 9.95 23.25 5.35 3.25 11.72 11 I1_AR4 ActiveIntronRegion 0 11.79 8.72 16.70 15.38 36.31 17.29 30.45 32.01 9.47 14.89 7.18 6.69 26.17 10.85 31.08 23.78 27.35 10.63 7.74 15.81 4.41 0.60 4.61 12 I1_SR3 SilentIntronRegion 0 17.80 5.67 13.84 17.87 26.27 20.92 47.79 20.91 6.50 11.39 2.60 6.32 24.91 6.98 22.21 13.98 15.31 4.57 0.63 23.51 4.15 0.00 5.78 13 I1_AR5 ActiveIntronRegion 0 45.67 27.35 19.94 26.71 53.88 18.64 38.73 48.38 14.06 22.60 6.62 18.26 44.26 7.20 29.71 21.80 18.46 3.48 3.77 23.48 1.71 3.09 7.39 14 I1_AR6 ActiveIntronRegion 0 22.61 20.61 7.68 11.75 31.12 9.87 17.42 16.30 5.91 11.68 1.04 29.77 40.61 4.72 18.33 14.06 3.71 0.97 5.09 9.26 0.00 2.19 3.09 15 I1_SR4 SilentIntronRegion 0 31.15 14.19 15.14 18.96 36.32 14.41 23.25 29.30 10.50 21.21 5.41 17.33 33.25 7.74 24.51 23.80 16.83 4.51 9.12 19.83 2.08 3.54 6.36 16 I1_AR7 ActiveIntronRegion 0 36.15 17.43 25.79 28.72 55.60 22.40 36.74 34.08 10.52 19.32 5.52 24.14 72.22 10.33 26.59 32.44 25.68 12.94 10.15 31.19 2.57 5.50 7.77 17 I1_AR8 ActiveIntronRegion 0 66.14 29.50 34.55 38.20 86.62 20.93 50.39 60.34 25.03 28.23 8.21 34.68 101.84 14.00 38.68 23.24 21.11 6.04 6.17 43.89 1.55 2.94 9.37 18 I1_SR5 SilentIntronRegion 0 38.27 15.27 24.99 28.47 54.41 16.90 29.67 36.00 14.60 14.58 4.63 21.92 46.09 12.47 27.36 25.31 12.09 7.07 9.04 16.34 0.93 5.83 7.43 19 I1_AR9 ActiveIntronRegion 0 50.82 16.25 25.07 29.81 22.48 12.35 24.60 25.65 10.56 15.11 6.25 24.25 27.79 13.33 25.90 10.14 17.72 4.42 1.64 8.13 3.97 5.04 1.48 20 I1_SR6 SilentIntronRegion 0 95.73 21.49 28.92 21.48 30.73 8.54 17.79 14.73 6.96 10.12 1.82 9.26 6.96 10.96 10.58 7.53 6.90 2.04 2.66 5.35 1.84 2.00 1.32 21 I1_SR7 SilentIntronRegion 0 21.56 5.86 7.37 5.20 23.32 9.75 13.66 8.42 2.47 5.26 4.58 7.85 12.50 7.21 15.46 18.28 10.15 3.30 4.49 7.36 1.41 3.34 2.82 22 E2_Aa NovelBoundary 0 30.15 17.83 5.12 11.25 34.80 14.08 29.99 33.93 9.23 15.42 7.63 26.56 37.98 9.65 26.82 24.18 53.95 10.74 0.00 34.20 0.00 5.76 0.00 23 ER2a ExonRegion 0 74.95 73.23 93.55 67.81 165.30 285.66 198.56 180.26 118.80 241.63 123.56 63.77 107.78 119.03 113.96 146.02 162.79 85.22 92.05 120.70 76.74 72.20 55.91 24 E2_Da NovelBoundary 0 22.74 31.24 30.28 55.30 39.13 15.73 21.95 47.15 25.72 34.89 2.37 6.30 33.76 9.89 27.81 7.86 13.37 2.03 8.47 29.53 0.00 8.39 0.00 25 E2a_E3a KnownJunction 0 82.68 93.73 65.11 44.22 113.67 287.28 256.41 151.52 115.57 204.47 130.14 161.45 201.93 153.45 221.03 121.93 173.63 60.85 90.17 91.02 85.19 88.97 52.75 26 E2a_E4a NovelJunction 0 7.11 25.06 27.08 11.15 3.48 20.95 8.57 13.72 25.06 36.13 9.79 0.00 0.00 14.01 0.00 11.28 8.32 11.15 9.60 19.62 10.81 8.27 4.10 27 I2 Intron 0 21.73 18.98 28.15 36.99 49.46 38.43 36.67 31.18 18.39 30.77 6.58 10.06 19.50 10.85 15.51 19.24 11.72 11.65 13.05 20.11 4.78 9.28 10.17 28 I2_SR1 SilentIntronRegion 0 16.88 20.10 25.27 35.59 50.72 39.39 39.99 28.81 12.67 28.54 6.06 10.61 22.93 10.57 14.86 17.83 13.50 6.08 11.95 14.94 2.70 8.95 9.81 29 I2_SR2 SilentIntronRegion 0 17.94 13.32 19.67 23.80 38.23 28.50 25.60 22.79 15.57 21.43 5.53 9.54 15.10 10.97 15.18 16.79 7.05 9.70 10.10 18.29 6.24 6.81 7.82 30 I2_AR2 ActiveIntronRegion 0 42.58 28.75 54.37 69.98 71.45 58.19 52.98 55.99 39.32 57.27 10.23 9.88 20.61 11.36 17.97 28.38 17.60 30.19 22.46 37.44 6.85 15.66 16.33 31 E3_Aa NovelBoundary 0 171.73 30.46 46.72 50.38 82.94 109.43 90.36 71.72 41.75 40.67 16.53 32.86 35.39 17.25 37.33 19.91 18.23 4.19 8.38 47.17 5.62 22.23 16.22 32 E3_Da NovelBoundary 0 66.75 48.94 71.52 77.75 99.75 67.40 53.66 67.61 41.58 57.89 7.58 6.00 46.43 14.54 46.36 52.38 27.58 23.34 13.08 56.18 3.15 23.82 15.11 33 E3a_E4a KnownJunction 0 20.52 45.78 42.22 43.28 36.16 87.34 62.62 135.54 85.94 202.35 96.39 69.32 71.59 110.31 101.00 149.96 144.37 76.23 72.66 99.46 100.33 66.19 68.38 34 ER3a ExonRegion 0 37.76 65.47 62.41 55.17 59.13 132.27 114.89 160.08 111.88 234.71 113.11 102.93 108.93 125.42 142.25 121.47 164.41 70.33 91.25 99.04 96.47 75.01 60.15 35 I3 Intron 0 55.92 35.34 50.82 60.92 71.71 75.06 60.64 76.84 58.49 75.88 30.35 35.44 44.64 29.64 32.81 64.85 38.24 33.62 33.80 53.10 14.67 30.68 31.48 36 I3_AR1 ActiveIntronRegion 0 55.55 27.40 51.04 68.01 41.84 51.85 47.44 57.16 52.99 53.35 26.84 42.05 46.45 20.19 30.17 46.23 37.82 15.62 20.16 48.41 11.83 27.96 12.85 37 I3_SR1 SilentIntronRegion 0 67.85 42.14 73.42 95.07 101.16 136.38 105.47 82.14 65.37 86.97 35.69 44.53 58.09 30.65 41.35 87.12 39.89 32.39 32.79 60.79 18.87 38.99 24.83 38 I3_AR2 ActiveIntronRegion 0 56.32 40.65 44.32 54.83 80.84 72.64 59.01 81.97 64.11 80.85 29.92 39.43 50.20 33.72 33.30 68.76 37.01 35.62 36.72 53.53 13.59 33.72 36.90 39 I3_SR2 SilentIntronRegion 0 25.49 18.66 57.46 58.97 80.75 66.59 59.78 86.12 52.42 79.60 25.51 8.47 42.31 31.98 29.21 54.03 36.75 56.66 35.75 54.89 16.21 18.84 28.71 40 I3_AR3 ActiveIntronRegion 0 55.51 27.72 51.31 48.53 50.14 61.61 45.82 74.47 45.30 73.83 32.46 19.87 19.40 25.64 29.06 58.15 41.67 38.88 38.22 50.70 16.88 22.34 38.60 41 E4_Aa NovelBoundary 0 20.30 34.20 49.26 28.07 50.68 68.99 47.12 68.76 45.83 75.72 21.85 12.60 13.64 14.48 8.90 32.21 17.11 33.70 12.71 40.27 17.61 18.06 23.56 42 ER4a ExonRegion 0 55.85 49.41 99.60 109.27 66.81 133.52 98.43 259.31 171.75 343.62 147.37 98.11 127.74 178.06 147.96 207.23 172.04 137.96 107.93 176.36 104.79 87.06 115.11 43 E4_Da NovelBoundary 0 65.20 53.87 47.57 51.28 74.79 82.28 53.75 73.85 34.23 59.96 27.59 36.16 33.28 36.08 24.72 59.64 43.38 17.87 24.85 67.18 13.90 20.08 23.39 44 E4a_E5a KnownJunction 0 28.08 36.64 134.50 119.17 86.08 87.28 132.97 324.40 218.37 441.32 155.14 133.09 206.64 216.20 194.33 399.30 233.94 250.50 148.80 239.31 146.97 109.91 174.82 45 I4 Intron 0 69.24 67.92 58.95 51.09 54.68 61.40 53.77 80.73 60.37 64.42 23.57 33.28 39.49 30.63 28.78 49.25 32.88 28.63 35.29 51.70 12.68 25.58 21.44 46 I4_AR1 ActiveIntronRegion 0 69.47 68.15 59.15 51.27 54.85 61.61 53.95 80.99 60.57 64.63 23.65 33.39 39.62 30.73 28.88 49.40 32.99 28.73 35.39 51.87 12.72 25.66 21.51 47 E5_Aa NovelBoundary 0 20.74 45.78 57.60 71.05 29.54 26.18 29.10 90.69 53.88 77.50 19.58 18.46 33.60 34.85 24.48 58.45 29.45 54.06 21.18 58.04 21.25 15.61 12.21 48 ER5a ExonRegion 0 47.66 47.30 175.04 139.50 90.44 128.91 100.56 351.20 238.36 444.47 176.23 119.24 141.09 172.90 196.12 272.74 190.25 165.47 156.08 218.60 110.55 98.02 141.24 49 E5_Da NovelBoundary 0 17.11 0.00 10.14 6.19 15.45 2.38 12.32 9.36 4.25 5.59 2.63 0.00 0.00 2.47 5.56 15.38 0.00 0.00 7.91 3.26 0.00 0.00 7.60 50 E5a_E6a KnownJunction 0 64.16 51.18 209.28 155.79 130.14 239.12 115.49 381.29 241.81 455.61 233.37 143.00 154.86 190.54 177.14 224.39 241.79 169.05 115.02 248.13 134.06 95.16 131.89 51 I5_AR1 ActiveIntronRegion 0 4.23 12.20 3.68 5.45 8.03 0.00 9.49 12.10 2.47 7.26 0.00 0.00 7.04 1.35 0.00 14.86 3.30 1.85 18.58 2.48 0.00 2.08 0.00 52 ER6a ExonRegion 0 79.54 76.70 200.15 143.75 119.19 182.72 131.17 317.47 225.01 399.44 177.21 101.08 191.58 205.85 195.56 274.96 231.42 206.00 132.58 215.43 136.74 100.31 148.19 53 E6a_E7a KnownJunction 0 226.19 165.96 249.81 205.34 198.73 311.07 179.74 400.55 285.67 480.94 244.64 128.29 236.67 199.07 265.28 566.18 345.77 265.14 304.20 361.00 184.96 94.05 261.21 54 ER7a ExonRegion 0 70.48 69.73 171.21 131.95 103.71 162.15 123.54 258.71 213.63 351.93 200.95 100.99 143.92 207.10 206.79 265.92 227.96 188.31 157.69 196.74 149.85 97.65 124.08 55 E7_Da NovelBoundary 0 0.00 2.63 25.04 13.02 12.14 21.69 8.44 36.97 13.92 20.33 2.53 0.00 8.28 7.06 9.64 21.19 26.46 17.12 4.80 11.82 2.47 5.02 12.38 56 E7a_E8a KnownJunction 0 46.38 71.70 161.85 125.89 133.45 150.60 128.38 243.61 214.35 338.89 169.10 120.79 188.62 224.26 175.04 217.81 224.78 227.16 142.50 185.04 110.33 121.67 122.24 57 I7 Intron 0 13.47 8.78 12.73 8.46 19.06 20.98 18.76 24.98 10.04 22.28 4.25 8.14 12.42 5.66 7.16 12.84 7.75 5.50 6.28 11.93 1.67 5.84 5.34 58 I7_AR1 ActiveIntronRegion 0 12.41 7.82 13.44 8.19 25.08 26.31 23.28 26.12 10.26 25.35 4.40 9.02 12.14 6.30 6.79 17.29 7.35 8.05 5.73 14.27 2.77 6.61 8.34 59 I7_SR1 SilentIntronRegion 0 14.54 9.72 12.14 8.77 13.58 16.16 14.67 24.07 9.91 19.56 4.13 7.38 12.75 5.09 7.55 8.78 8.18 3.16 6.82 9.83 0.66 5.16 2.59 60 E8_Aa NovelBoundary 0 13.71 12.17 24.51 15.65 8.57 9.43 31.44 27.15 17.10 27.51 11.27 19.81 0.00 7.18 10.14 0.00 17.39 0.00 0.00 17.77 5.93 7.84 8.71 61 ER8a ExonRegion 0 64.23 77.78 202.67 172.62 129.48 208.72 142.55 324.30 274.63 413.77 212.26 118.23 153.89 245.29 215.87 325.30 244.42 233.08 171.77 216.70 156.00 124.42 148.60 62 E8_Da NovelBoundary 0 11.04 8.75 11.59 11.45 11.80 4.60 22.70 22.92 3.41 11.12 4.79 0.00 7.63 6.95 0.00 16.49 18.14 4.73 9.60 13.10 5.68 0.00 0.00 63 E8a_E9a KnownJunction 0 107.06 94.52 201.32 236.63 110.95 198.41 126.88 397.84 348.55 461.30 192.89 107.89 213.30 284.54 311.39 404.77 274.80 244.53 296.20 244.04 175.45 152.10 178.66 64 I8_SR2 SilentIntronRegion 0 6.26 3.44 13.36 6.83 6.99 9.06 8.38 11.57 5.30 11.97 5.65 0.20 0.54 5.64 3.78 8.98 8.73 3.44 2.67 8.83 2.94 2.05 4.76 65 E9_Aa NovelBoundary 0 10.37 0.00 6.12 18.58 8.66 5.17 12.72 20.95 10.16 19.34 0.00 0.00 0.00 12.01 0.00 15.47 8.60 4.60 4.05 15.08 0.00 4.78 4.35 66 ER9a ExonRegion 0 5.88 4.41 10.37 8.79 5.40 12.07 9.89 16.01 12.41 18.32 7.92 4.84 5.30 11.50 12.90 16.49 9.66 12.78 10.72 9.50 7.96 7.39 8.49