Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SCRN2 Gene 0 59.22 25.13 213.66 109.29 45.81 60.04 48.58 113.08 60.51 135.60 41.60 7.47 7.43 39.40 74.71 42.36 43.56 59.19 38.04 59.65 65.93 26.80 44.55 2 407215 Transcript 0 64.50 26.88 228.71 162.34 66.47 70.90 52.01 139.90 55.70 114.97 19.20 6.04 7.58 29.09 39.45 26.74 15.86 55.85 30.53 52.70 36.28 22.20 38.25 3 290216 Transcript 0 19.78 3.35 70.52 18.11 8.66 0.00 12.59 36.76 18.52 69.14 14.53 0.00 6.66 19.19 63.79 20.59 35.90 11.03 12.05 24.10 33.98 5.76 15.96 4 ER1a ExonRegion 0 48.26 13.94 26.68 14.80 28.58 36.22 24.15 13.21 8.04 25.30 30.76 0.10 0.00 10.60 35.69 36.14 28.24 23.60 24.70 15.70 24.28 8.83 36.78 5 E1a_E2a KnownJunction 0 132.76 38.61 102.83 66.09 63.75 82.45 58.69 62.97 33.13 89.45 56.28 0.00 5.84 11.18 19.28 59.81 53.11 107.20 81.98 27.87 53.62 22.04 59.92 6 I1 Intron 0 5.34 3.42 15.35 8.54 7.87 10.79 4.82 16.24 11.35 22.03 1.08 0.00 0.00 0.88 3.49 4.16 4.16 15.19 4.02 13.71 5.24 6.42 10.71 7 I1_AR1 ActiveIntronRegion 0 5.41 3.46 15.55 8.65 7.98 10.91 4.89 16.46 11.49 22.32 1.09 0.00 0.00 0.90 3.53 4.22 4.21 15.38 4.07 13.90 5.32 6.51 10.85 8 E2_Aa NovelBoundary 0 11.71 5.39 56.92 19.34 12.14 42.70 11.88 29.16 24.42 38.39 2.37 0.00 0.00 4.77 4.33 0.00 3.93 30.59 22.12 11.44 13.78 5.27 22.96 9 ER2a ExonRegion 0 21.93 12.25 123.89 53.72 21.99 42.98 24.23 62.55 41.89 94.98 38.91 7.12 5.07 19.31 53.74 30.93 50.99 55.42 44.39 50.79 56.75 23.58 48.96 10 E2_Da NovelBoundary 0 3.56 12.76 14.34 23.97 8.66 8.12 3.44 27.36 11.43 14.02 0.00 0.00 0.00 4.94 10.51 12.90 3.83 4.56 8.85 2.62 10.87 11.70 23.90 11 E2a_E3a KnownJunction 1 30.82 12.37 261.17 94.66 7.89 48.32 33.08 116.08 35.13 180.83 29.22 0.00 5.84 51.68 176.28 114.24 51.43 136.13 160.10 73.50 53.56 23.51 101.07 12 E2a_E4a NovelJunction 0 7.41 0.00 8.10 12.39 3.31 5.56 0.00 3.98 11.28 0.00 0.00 0.00 0.00 0.00 9.64 0.00 0.00 4.93 4.80 0.00 8.59 0.00 0.00 13 E3_Aa NovelBoundary 0 6.67 5.53 28.41 47.95 17.06 29.87 4.50 28.26 10.33 21.44 5.26 0.00 0.00 14.07 19.90 7.86 4.77 11.03 4.33 17.39 8.59 12.00 4.27 14 ER3a ExonRegion 0 32.86 24.47 258.45 96.12 53.56 59.37 55.08 121.32 56.82 143.21 40.78 10.13 7.71 44.68 87.34 46.36 53.05 77.49 51.05 74.57 69.62 31.26 47.87 15 E3_Da NovelBoundary 0 16.23 9.08 65.46 72.02 43.38 58.43 22.83 46.25 30.18 41.05 14.95 5.25 20.45 22.37 10.14 16.06 21.41 25.95 22.87 18.60 32.68 8.45 15.45 16 E3a_E4a KnownJunction 0 46.38 29.47 302.62 84.14 19.19 23.74 68.36 146.63 67.33 166.38 51.54 11.40 18.51 48.97 69.47 30.68 64.70 60.27 25.60 51.52 54.30 7.84 36.54 17 I3 Intron 0 14.29 7.02 20.82 17.67 27.29 29.16 18.07 15.45 10.22 12.82 9.28 6.69 3.60 13.46 13.39 11.59 9.41 14.47 15.77 8.62 17.84 10.00 17.62 18 I3_AR1 ActiveIntronRegion 0 14.37 7.06 20.94 17.77 27.45 29.34 18.18 15.55 10.28 12.89 9.33 6.72 3.62 13.54 13.46 11.66 9.46 14.54 15.86 8.67 17.95 10.06 17.72 19 E4_Aa NovelBoundary 0 21.41 17.89 76.90 67.76 86.16 48.84 41.07 57.79 29.69 28.63 5.16 7.65 6.82 24.19 13.35 29.56 15.99 18.78 9.41 16.36 30.52 15.19 24.67 20 ER4a ExonRegion 0 103.87 34.95 309.84 119.89 63.04 73.66 58.68 139.49 72.58 176.24 59.69 15.11 16.27 63.15 97.25 46.14 66.45 76.16 43.62 67.60 103.74 29.91 54.08 21 E4_Da NovelBoundary 0 10.15 5.46 18.98 40.62 24.02 20.44 9.58 10.43 9.29 15.39 5.16 0.00 0.00 7.24 28.56 8.72 0.00 9.53 9.41 6.52 16.56 0.00 0.00 22 E4a_E5a KnownJunction 0 101.80 19.73 297.30 135.38 65.37 74.56 81.52 134.64 74.22 187.79 38.85 13.05 6.82 52.80 66.88 47.94 54.98 86.26 41.04 53.56 83.71 20.76 66.33 23 I4_SR1 SilentIntronRegion 0 2.68 8.57 3.84 6.85 5.64 17.00 6.14 6.51 3.10 5.04 0.81 0.00 0.00 3.30 5.68 1.25 0.00 5.42 6.71 2.69 5.57 0.88 1.24 24 E5_Aa NovelBoundary 0 16.60 20.65 51.30 29.27 0.00 24.47 6.49 21.03 8.42 22.59 4.47 0.00 6.82 2.30 18.17 4.36 4.49 15.01 12.80 19.43 5.25 6.12 11.10 25 ER5a ExonRegion 0 68.94 30.28 294.24 119.00 44.32 68.35 68.23 115.84 77.54 178.84 55.54 6.77 7.49 57.26 104.65 54.54 60.87 79.56 45.92 74.74 87.59 30.45 50.41 26 E5a_E6a KnownJunction 0 106.02 36.64 265.45 139.18 25.21 70.93 37.14 137.72 69.59 181.00 50.38 5.55 12.82 47.91 88.02 51.44 53.02 73.62 42.92 67.30 85.81 24.49 42.08 27 E6_Aa NovelBoundary 0 24.60 5.53 40.24 3.13 23.68 5.34 9.41 14.62 5.76 8.81 2.26 0.00 0.00 4.77 4.45 15.89 4.77 6.88 18.07 14.89 0.00 0.00 0.00 28 ER6a ExonRegion 0 81.15 28.78 307.88 154.93 40.18 83.16 66.15 161.53 91.93 196.33 54.07 7.07 9.83 52.27 105.51 56.83 47.13 68.80 43.75 84.38 87.07 32.22 59.16 29 E6_Da NovelBoundary 0 23.93 2.89 97.36 31.43 8.32 19.93 21.02 32.24 28.18 44.83 6.90 6.30 6.17 11.12 11.74 7.52 0.00 12.44 9.60 18.60 16.74 2.88 11.95 30 E6a_E7a KnownJunction 0 80.90 32.43 198.81 106.55 27.33 76.66 67.48 118.91 70.11 142.69 57.96 29.26 12.66 57.21 136.60 35.55 41.80 70.18 7.81 82.26 63.57 20.45 42.68 31 I6 Intron 0 13.49 1.30 6.98 2.59 6.82 8.18 12.66 0.00 2.35 2.18 4.93 2.27 0.00 7.00 11.97 5.68 4.21 1.76 4.06 5.43 8.43 1.33 3.74 32 I6_AR1 ActiveIntronRegion 0 13.81 1.33 7.13 2.66 6.96 8.39 12.95 0.00 2.39 2.22 5.06 2.33 0.00 7.18 12.27 5.83 4.27 1.80 4.17 5.54 8.65 1.36 3.84 33 E7_Aa NovelBoundary 0 55.49 12.50 75.25 30.83 29.37 47.36 46.68 33.27 21.38 53.75 7.21 6.30 6.49 9.89 13.35 16.24 7.29 19.73 11.95 14.83 20.08 8.70 0.00 34 ER7a ExonRegion 0 86.88 35.96 273.18 164.46 63.57 96.08 69.83 153.53 79.68 173.11 51.77 9.23 10.99 48.75 101.82 68.06 54.18 85.13 42.04 71.36 83.78 35.98 60.34 35 E7_Da KnownBoundary 0 63.72 33.35 258.86 213.09 72.67 122.83 55.42 190.09 74.33 118.57 19.16 0.00 0.00 32.55 46.85 38.37 17.11 71.59 32.19 61.42 46.70 10.29 19.72 36 E7a_E7b KnownJunction 0 19.78 3.35 70.52 18.11 8.66 0.00 12.59 36.76 18.52 69.14 14.53 0.00 6.66 19.19 63.79 20.59 35.90 11.03 12.05 24.10 33.98 5.76 15.96 37 ER7b ExonRegion 0 64.50 26.88 228.71 162.34 66.47 70.90 52.01 139.90 55.70 114.97 19.20 6.04 7.58 29.09 39.45 26.74 15.86 55.85 30.53 52.70 36.28 22.20 38.25 38 E7_Ab KnownBoundary 0 72.61 26.77 210.28 160.45 109.93 67.23 53.00 109.01 45.57 102.56 15.16 12.45 0.00 16.48 35.48 8.37 16.83 20.44 20.33 54.78 47.07 10.72 33.46 39 ER7c ExonRegion 0 32.78 17.82 100.64 71.60 26.89 23.34 24.09 86.26 51.24 106.67 33.57 5.14 2.54 28.38 58.19 29.17 29.44 23.53 24.66 44.42 50.72 24.51 22.13