Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BECN1 Gene 0 104.87 63.35 113.43 92.36 110.36 149.56 138.12 120.51 92.94 166.80 221.26 110.09 82.16 245.56 178.55 227.19 180.29 67.83 62.54 80.36 137.11 120.83 120.00 2 361523 Transcript 0 161.92 86.45 142.64 117.20 166.78 195.08 191.74 164.87 116.86 211.81 262.48 144.81 108.26 295.32 223.38 236.47 234.64 77.84 71.65 104.83 168.01 138.48 118.32 3 438274 Transcript 0 1.70 1.68 0.69 0.75 2.16 0.00 7.07 2.30 1.27 2.79 4.58 0.00 13.07 11.42 2.23 6.15 0.00 2.13 2.40 1.60 3.86 2.88 1.62 4 ER1a ExonRegion 1 27.37 11.18 20.46 10.77 32.91 90.59 63.55 12.10 11.90 19.08 52.32 0.00 5.00 28.64 23.69 93.32 67.56 31.17 13.38 21.13 62.44 23.54 63.53 5 ER1b ExonRegion 1 76.49 39.70 55.83 37.00 107.05 228.62 181.34 49.57 48.66 93.52 194.70 4.76 19.63 184.35 120.38 363.24 187.34 98.33 86.37 60.44 138.49 121.04 214.94 6 E1a_E2a KnownJunction 1 3.11 0.00 26.67 8.52 0.00 19.02 5.74 19.76 19.94 34.17 42.22 5.40 13.64 29.84 40.42 8.03 90.23 11.52 8.28 11.76 89.08 14.51 21.94 7 ER2a ExonRegion 0 9.51 14.97 104.25 72.07 18.91 36.66 14.10 116.24 97.15 197.89 368.42 85.77 66.69 289.71 185.28 378.14 268.70 113.30 93.56 90.99 211.72 187.99 210.55 8 E2a_E3a KnownJunction 1 15.41 20.59 141.95 122.16 65.62 64.34 36.26 162.20 120.69 248.74 322.87 188.01 146.09 347.46 397.68 916.43 173.91 201.34 219.02 102.01 166.24 188.66 548.03 9 ER3a ExonRegion 0 13.60 35.62 115.46 78.99 94.71 157.38 86.23 130.45 108.82 202.01 288.43 110.59 72.21 273.19 167.68 353.90 233.88 124.21 83.48 93.43 173.35 136.38 213.81 10 E3a_E4a KnownJunction 0 20.74 35.98 109.43 88.03 204.24 330.04 258.13 181.63 127.57 235.15 310.71 96.48 66.88 285.77 143.77 238.23 265.36 114.70 119.16 117.86 207.45 202.07 102.69 11 ER4a ExonRegion 0 43.53 71.96 111.35 98.59 227.40 475.75 388.69 149.51 123.95 219.48 411.33 114.10 99.40 333.99 189.38 288.78 274.13 97.07 84.46 114.24 245.96 235.10 144.32 12 E4_Da NovelBoundary 0 35.71 38.15 48.25 42.02 33.02 116.41 121.40 66.25 27.29 94.50 52.28 12.30 36.20 48.97 38.32 51.44 46.47 34.07 51.30 30.94 50.47 31.78 24.33 13 E4a_E5a KnownJunction 0 105.50 74.66 110.64 103.38 105.77 203.86 199.88 133.08 85.73 202.92 274.28 156.05 120.12 268.76 143.52 193.62 247.69 75.15 58.45 88.91 171.19 147.21 97.66 14 E4a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 2.34 2.55 2.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 I4 Intron 0 23.84 19.81 36.69 34.47 33.00 23.03 35.38 40.78 21.99 53.73 42.37 33.89 20.38 45.26 19.38 40.74 30.40 21.61 21.09 27.05 18.27 16.81 29.51 16 I4_AR1 ActiveIntronRegion 0 23.91 19.87 36.80 34.58 33.09 23.10 35.48 40.89 22.06 53.89 42.50 33.99 20.44 45.40 19.44 40.86 30.49 21.67 21.16 27.13 18.33 16.86 29.60 17 E5_Aa NovelBoundary 0 22.30 18.02 47.22 25.94 18.42 29.02 38.11 44.77 25.72 71.05 33.64 0.00 33.11 29.61 33.87 56.57 12.25 21.35 12.99 22.56 17.05 8.76 4.35 18 ER5a ExonRegion 0 117.87 75.38 125.12 101.32 74.42 152.59 121.94 166.31 121.77 232.37 363.85 168.94 103.18 378.81 221.83 255.77 315.18 80.75 62.80 127.40 234.20 154.27 129.41 19 E5a_E6a KnownJunction 0 104.31 71.30 125.99 126.59 93.46 142.99 139.38 166.80 148.70 252.23 388.47 140.45 139.28 452.88 261.95 296.59 361.01 118.10 110.21 130.07 216.53 168.45 151.60 20 E6_Aa NovelBoundary 0 41.93 3.35 23.27 9.29 11.21 19.02 13.34 36.19 26.42 38.31 7.74 31.96 19.32 31.20 24.35 31.19 40.58 11.90 18.35 15.53 16.12 3.00 11.18 21 ER6a ExonRegion 0 113.60 84.36 174.28 144.73 127.03 142.89 144.84 208.08 157.49 283.02 404.67 161.74 100.72 447.76 252.30 328.32 325.20 122.65 101.42 133.62 220.92 198.73 168.61 22 E6a_E7a KnownJunction 0 155.29 119.98 248.90 190.55 228.44 259.06 244.18 217.65 173.61 289.30 416.42 253.88 139.11 385.02 286.79 396.56 317.25 120.50 121.42 142.09 220.73 176.90 149.64 23 ER7a ExonRegion 0 115.15 95.70 231.61 181.88 167.87 206.02 192.75 212.28 182.44 320.90 406.77 227.57 156.21 464.55 297.94 388.51 350.28 111.06 121.31 155.32 239.28 202.49 214.66 24 E7a_E8a KnownJunction 0 175.51 113.14 259.10 227.61 212.82 225.55 235.61 217.20 191.35 388.72 405.31 277.14 206.48 480.67 356.39 397.93 377.56 106.95 128.00 168.49 243.77 254.12 156.04 25 E7a_E9a NovelJunction 0 0.00 2.70 3.76 6.86 0.00 0.00 0.00 0.00 0.00 1.16 7.37 0.00 0.00 4.59 10.75 0.00 8.13 9.87 0.00 3.00 5.93 8.82 12.98 26 ER8a ExonRegion 0 187.92 122.10 227.43 202.88 213.15 223.50 226.89 204.49 199.05 339.50 404.65 226.31 167.44 444.66 343.18 395.86 341.54 96.76 107.41 147.18 252.60 226.65 196.52 27 E8_Da NovelBoundary 1 10.37 8.49 20.99 17.58 19.44 21.92 46.94 22.88 23.06 34.49 12.06 18.76 39.28 24.78 11.00 15.89 21.32 25.99 13.65 31.45 13.84 20.21 34.74 28 E8a_E9a KnownJunction 0 226.48 98.73 221.55 206.13 216.89 300.79 327.16 202.62 184.17 294.17 347.98 297.10 206.80 418.10 398.42 358.62 334.64 89.33 125.56 120.16 230.06 289.21 187.80 29 I8_AR1 ActiveIntronRegion 0 15.73 7.18 13.57 11.02 18.49 17.70 22.56 19.78 9.34 16.33 20.98 17.85 19.97 28.86 19.37 21.95 26.62 9.49 8.79 15.30 9.89 12.90 19.68 30 I8_SR1 SilentIntronRegion 0 8.71 3.83 1.05 4.28 25.02 6.82 15.43 13.18 3.07 7.31 8.18 8.76 14.62 19.19 22.40 16.52 9.90 6.57 0.67 4.01 5.53 3.05 16.94 31 I8_AR2 ActiveIntronRegion 0 21.31 12.55 8.30 11.88 19.12 11.91 33.10 14.22 12.56 16.67 13.81 17.70 5.56 16.11 16.21 12.55 1.07 6.57 8.28 7.60 11.45 14.89 7.63 32 E9_Aa NovelBoundary 0 41.41 39.20 15.91 31.56 30.73 24.47 31.49 28.05 5.87 23.72 12.37 43.81 12.66 22.96 27.81 24.87 4.77 16.66 3.67 10.67 12.11 12.06 7.60 33 ER9a ExonRegion 0 176.36 126.54 205.30 177.00 212.17 220.67 215.14 213.75 146.95 274.34 326.17 230.53 170.44 390.78 342.00 345.24 235.71 111.41 102.59 115.45 218.12 202.42 158.52 34 E9_Da NovelBoundary 0 3.48 8.62 35.72 19.58 16.72 10.68 33.61 21.69 11.52 28.45 38.54 18.01 6.17 21.66 8.90 31.96 14.31 24.33 3.86 6.46 0.00 16.84 15.28 35 E9a_E10a KnownJunction 0 197.44 162.80 215.60 182.89 199.32 205.85 183.10 196.70 144.47 258.33 241.64 152.75 158.59 398.50 320.29 253.27 208.51 72.88 86.59 110.96 155.80 132.14 170.38 36 E9a_E12a NovelJunction 0 13.41 0.00 6.30 1.60 3.48 7.67 6.36 0.00 4.63 2.98 28.69 13.20 6.82 21.13 25.59 23.58 3.83 2.53 0.00 6.01 3.09 7.65 14.85 37 I9 Intron 0 15.16 10.04 23.22 16.80 16.85 14.95 24.20 11.45 9.32 22.16 18.38 15.22 8.69 16.48 13.21 22.02 15.08 14.53 8.65 10.51 7.35 11.84 15.23 38 I9_AR1 ActiveIntronRegion 0 15.95 11.41 28.69 20.19 18.88 14.70 28.24 12.81 10.63 27.14 22.63 16.30 8.05 19.54 16.50 28.11 16.41 18.56 10.73 12.63 9.19 12.70 19.31 39 E10_Aa NovelBoundary 0 17.41 8.49 21.61 35.66 44.40 20.44 25.79 21.11 20.60 29.58 7.05 6.30 13.64 12.01 4.45 14.18 0.00 2.07 4.71 11.57 0.00 13.47 0.00 40 ER10a ExonRegion 0 197.08 124.72 187.46 136.74 210.42 170.27 230.09 184.32 127.36 239.82 239.77 248.27 150.47 417.45 277.38 242.54 191.99 58.92 66.21 116.46 167.84 181.85 130.46 41 E10_Da NovelBoundary 0 20.74 9.60 36.96 27.64 29.46 13.63 35.73 30.81 21.73 27.75 15.16 11.85 39.77 19.78 0.00 17.86 21.69 6.09 8.94 20.77 8.15 22.90 8.62 42 E10a_E11a KnownJunction 0 386.07 123.79 196.12 132.12 241.00 216.01 294.17 218.51 129.80 263.30 187.73 135.79 99.83 222.14 343.41 177.39 184.20 62.26 57.98 122.02 179.83 194.36 107.64 43 E10a_E12a KnownJunction 0 3.41 3.35 1.39 1.50 4.33 0.00 11.88 2.26 0.00 2.85 9.16 0.00 26.13 22.84 4.45 12.30 0.00 4.27 4.80 3.20 7.72 5.76 3.24 44 I10 Intron 0 38.50 14.32 29.47 23.36 41.51 21.91 35.77 25.72 17.06 25.75 17.06 23.25 15.32 23.17 15.38 20.40 13.54 9.09 9.09 24.65 5.70 12.63 14.14 45 I10_AR1 ActiveIntronRegion 1 6.83 7.07 15.32 6.35 13.93 3.67 13.09 8.49 4.94 5.08 4.96 38.97 9.81 9.56 7.45 6.01 5.10 5.80 5.21 14.85 0.00 5.54 2.94 46 I10_SR1 SilentIntronRegion 0 21.95 18.86 31.08 23.24 45.39 24.07 39.18 19.63 21.59 21.04 14.58 27.48 15.19 25.24 8.82 17.07 14.38 7.09 8.45 22.40 3.72 10.41 9.99 47 I10_AR2 ActiveIntronRegion 0 57.77 11.69 30.50 26.26 42.76 23.05 36.61 33.77 15.20 33.15 21.17 17.38 16.40 23.68 22.31 25.61 14.23 11.37 10.30 28.26 8.31 15.71 19.51 48 E11_Aa NovelBoundary 0 58.60 14.93 46.86 22.54 50.76 31.91 54.50 47.44 16.00 34.14 7.53 18.01 14.12 22.01 33.13 7.52 16.74 23.79 4.71 13.81 9.45 12.43 11.52 49 ER11a ExonRegion 0 280.33 130.35 203.80 161.47 259.40 327.98 301.63 222.14 142.48 266.68 262.39 189.41 154.12 329.29 323.56 280.56 226.98 88.20 80.44 129.09 186.73 150.22 146.09 50 E11_Da NovelBoundary 0 111.06 28.42 61.65 18.18 46.10 7.78 28.62 45.26 20.14 17.19 25.06 43.51 0.00 17.42 29.30 44.09 9.16 18.45 13.55 41.10 9.02 34.11 18.27 51 E11a_E12a KnownJunction 0 328.87 173.52 221.07 201.07 505.35 414.82 407.84 304.07 197.08 309.18 274.65 241.88 221.25 439.88 376.79 342.56 301.36 79.59 110.40 153.98 187.49 171.09 169.02 52 I11 Intron 0 33.34 12.20 0.00 0.00 12.04 5.50 8.94 0.00 0.00 0.00 2.90 10.31 11.59 11.18 15.74 8.92 2.48 5.54 0.00 4.79 4.96 6.25 11.01 53 I11_AR1 ActiveIntronRegion 0 34.31 12.57 0.00 0.00 12.41 5.67 9.21 0.00 0.00 0.00 2.96 10.56 11.94 11.49 16.18 9.19 2.55 5.71 0.00 4.90 5.08 6.41 11.35 54 E12_Aa NovelBoundary 0 97.87 19.80 52.66 20.51 94.91 38.16 64.70 31.34 10.36 27.02 18.95 26.41 32.63 31.96 51.05 35.29 20.94 12.31 9.60 20.90 16.37 17.45 20.57 55 ER12a ExonRegion 0 68.12 26.60 26.99 24.50 35.93 58.06 59.59 34.97 21.27 31.38 31.57 21.88 23.20 51.51 51.42 45.36 25.60 11.67 11.51 17.06 17.53 21.18 22.37 56 ER12b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00