Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	C17orf53	Gene	0	14.66	25.92	76.18	34.26	22.87	16.90	44.45	68.13	19.63	93.77	78.43	30.86	21.29	70.70	52.28	83.21	60.09	69.04	16.59	41.74	11.56	10.62	11.27
2	253405	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	245382	Transcript	0	5.41	3.22	14.55	3.40	3.99	0.00	5.26	5.11	0.00	5.47	6.34	10.80	0.00	6.15	12.42	17.69	10.66	12.75	2.40	1.63	4.73	1.56	0.00
4	319977	Transcript	0	14.04	22.25	50.84	26.34	20.45	11.79	35.55	41.85	10.26	55.46	42.56	15.86	13.57	46.15	36.64	55.68	38.34	34.21	10.68	24.24	6.33	9.52	8.94
5	ER1a	ExonRegion	0	2.30	4.66	9.08	2.08	2.23	2.49	16.31	8.21	2.53	14.25	23.94	0.97	0.12	21.80	9.31	17.98	17.33	19.93	2.73	9.65	1.02	1.44	4.47
6	E1a_E2a	KnownJunction	0	0.00	5.99	18.01	3.60	0.00	0.00	2.25	17.62	5.99	44.73	45.70	0.00	0.00	27.90	31.65	40.84	31.23	18.70	3.67	23.59	5.87	8.82	4.27
7	ER2a	ExonRegion	1	0.00	9.89	21.34	9.17	11.02	1.08	8.51	30.60	10.29	48.53	70.15	9.08	4.41	50.32	43.69	52.51	35.21	48.22	4.50	31.04	9.81	3.02	3.57
8	E2a_E3a	KnownJunction	0	0.00	12.23	23.15	12.99	11.04	2.90	16.78	45.55	11.69	55.04	86.71	19.21	6.82	55.98	52.78	61.86	42.17	59.90	4.80	41.99	17.30	0.00	8.71
9	ER3a	ExonRegion	0	5.45	11.03	50.18	15.11	7.84	8.53	38.56	66.21	16.43	84.66	77.47	21.52	16.56	63.80	42.21	60.62	58.74	61.60	16.08	50.47	10.85	6.78	9.51
10	E3_Da	KnownBoundary	1	19.26	27.56	54.02	20.61	15.20	10.90	41.42	64.32	12.56	103.93	106.76	22.96	15.10	80.11	25.71	94.42	80.69	61.23	13.46	43.72	14.27	10.65	0.00
11	E3a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER3b	ExonRegion	0	11.69	31.57	82.61	27.41	16.38	16.94	50.96	85.26	21.73	121.48	104.85	54.33	35.13	98.85	51.20	128.54	97.96	113.47	26.80	54.38	14.76	16.25	14.62
13	E3_Ab	KnownBoundary	0	21.63	57.69	117.50	37.42	11.46	5.74	42.18	119.90	19.53	137.35	95.81	25.51	47.24	104.30	87.15	124.07	103.69	117.44	23.06	59.32	19.46	11.82	3.41
14	ER3c	ExonRegion	0	11.43	35.52	98.34	29.73	14.92	27.71	81.21	97.58	23.14	152.90	142.01	36.09	32.42	116.23	61.56	122.28	116.89	114.68	30.64	70.07	18.85	13.20	10.85
15	E3_Db	KnownBoundary	0	10.59	29.93	80.19	29.50	44.23	39.52	87.04	93.07	21.76	153.89	168.99	32.11	41.72	112.37	52.41	95.70	101.17	118.68	9.41	78.94	15.32	13.96	21.68
16	ER3d	ExonRegion	0	13.20	30.74	104.42	37.37	29.74	21.16	63.60	82.76	21.48	128.08	115.51	64.32	45.13	114.44	60.99	120.48	82.37	102.35	20.02	50.29	15.66	13.49	18.58
17	E3c_E4a	KnownJunction	0	3.04	27.30	57.42	24.21	23.17	13.74	53.70	43.66	14.24	64.15	47.70	18.91	26.13	68.69	35.60	49.39	52.27	32.21	18.45	18.34	8.53	9.12	11.69
18	E3c_E6b	KnownJunction	0	0.00	3.35	14.84	1.70	3.65	0.00	4.28	5.34	0.00	5.40	4.79	14.10	0.00	4.89	4.45	26.92	17.30	14.18	0.00	0.00	9.45	3.12	0.00
19	E4_Aa	NovelBoundary	0	5.70	13.68	42.13	13.98	11.21	2.33	23.01	22.10	11.37	20.90	4.21	6.30	14.77	4.59	22.62	10.51	3.93	23.63	8.47	24.48	0.00	2.82	7.85
20	ER4a	ExonRegion	0	7.91	18.40	54.57	12.95	21.47	15.37	37.84	38.19	7.41	61.07	49.93	37.47	17.03	61.18	44.73	67.01	46.37	27.03	10.54	14.24	9.10	9.72	6.50
21	E4_Da	NovelBoundary	0	6.67	15.19	32.05	20.94	32.68	0.00	25.13	12.57	10.01	31.00	24.69	12.60	13.31	22.07	8.90	40.76	17.67	11.32	0.00	41.48	0.00	2.69	0.00
22	E4a_E5a	KnownJunction	0	10.30	21.71	27.05	5.43	23.94	9.99	29.59	34.30	4.51	36.64	35.22	31.51	6.82	30.49	13.35	40.76	34.32	11.44	4.24	9.33	3.15	2.45	0.00
23	E4a_E6b	NovelJunction	0	0.00	9.41	21.82	4.66	4.33	2.10	4.06	12.36	2.72	12.73	4.63	12.00	20.45	2.47	4.45	0.00	0.00	14.67	0.00	0.00	0.00	0.00	0.00
24	I4	Intron	0	4.95	12.68	23.48	14.05	18.38	7.32	26.25	23.46	7.08	29.05	15.35	10.02	7.04	14.55	13.28	26.06	14.95	14.72	3.72	13.27	1.61	3.55	3.72
25	I4_SR1	SilentIntronRegion	0	4.96	12.72	23.55	14.09	18.43	7.35	26.32	23.53	7.10	29.13	15.39	10.05	7.06	14.59	13.32	26.13	14.99	14.77	3.73	13.30	1.61	3.56	3.73
26	E5_Aa	NovelBoundary	1	2.74	28.68	41.25	21.71	15.79	7.84	23.72	35.36	7.44	27.43	12.53	43.51	13.31	22.01	9.52	34.44	0.00	28.44	12.05	11.51	0.00	2.76	0.00
27	ER5a	ExonRegion	0	18.73	30.49	47.67	31.87	21.46	10.91	39.16	49.23	14.30	56.90	63.36	21.37	19.06	41.96	33.62	65.53	41.55	27.66	5.56	22.66	9.91	12.94	7.41
28	E5_Da	NovelBoundary	1	10.89	8.62	61.97	49.24	28.18	13.00	25.13	42.76	12.30	40.08	4.69	39.01	6.49	17.25	4.45	24.27	14.03	30.68	8.85	9.27	5.31	3.00	0.00
29	E5a_E6a	KnownJunction	0	0.00	0.00	1.74	1.33	4.33	0.00	0.00	0.00	1.79	1.34	0.00	0.00	0.00	5.18	4.45	3.67	0.00	2.16	0.00	3.20	0.00	2.57	0.00
30	E5a_E6b	NovelJunction	0	20.37	13.29	21.79	15.35	12.65	2.90	33.12	19.22	4.48	28.72	41.33	6.00	0.00	33.73	38.45	50.24	15.33	23.59	4.80	14.06	0.00	16.72	6.91
31	I5	Intron	0	9.51	14.25	25.26	18.61	10.87	3.96	19.22	25.16	9.07	27.77	9.36	6.78	2.00	10.55	14.49	17.21	9.99	17.48	4.13	21.15	2.48	3.24	4.57
32	I5_AR1	ActiveIntronRegion	0	9.51	14.25	26.54	20.12	10.25	4.85	19.24	28.59	10.70	31.16	9.45	8.01	1.53	9.90	14.61	14.53	10.03	18.70	2.53	25.29	3.49	3.85	4.27
33	I5_AR2	ActiveIntronRegion	0	10.06	15.08	23.96	16.40	12.79	2.44	20.16	19.55	6.16	22.23	9.61	4.74	3.08	12.38	14.81	23.24	10.42	15.95	7.52	13.87	0.59	2.21	5.46
34	E6_Ab	NovelBoundary	0	3.78	8.68	22.71	16.55	14.69	16.52	7.15	8.63	4.54	22.19	7.42	0.00	0.00	2.12	5.07	11.54	3.83	19.15	0.00	5.31	2.59	3.00	0.00
35	ER6a	ExonRegion	1	4.23	7.63	24.51	12.61	15.39	0.00	20.19	15.56	5.56	23.51	19.33	6.49	1.17	15.84	8.70	34.18	9.08	16.17	0.00	12.23	1.65	10.42	5.87
36	ER6b	ExonRegion	0	12.72	12.14	65.14	25.79	22.99	11.80	29.13	43.47	16.43	60.83	68.40	30.51	11.90	60.32	43.09	63.87	47.71	24.24	10.23	38.28	9.10	6.27	7.50
37	E6_Da	NovelBoundary	0	3.78	5.66	24.39	16.78	4.33	2.16	16.43	32.53	6.51	23.64	14.95	0.00	0.00	0.00	13.35	18.97	8.70	7.54	7.91	22.69	2.66	0.00	4.27
38	E6a_E7a	KnownJunction	0	17.26	9.80	54.02	16.08	16.38	16.30	17.67	32.65	9.75	60.57	112.29	23.56	20.45	50.74	41.91	101.77	51.99	37.31	4.52	22.18	6.30	5.94	12.55
39	E6a_E8a	NovelJunction	0	2.96	6.25	14.34	3.86	0.00	0.00	3.89	6.74	1.30	3.33	0.00	0.00	0.00	7.95	0.00	0.00	0.00	6.59	0.00	2.62	0.00	0.00	0.00
40	I6	Intron	0	7.46	5.52	17.34	9.37	6.53	5.97	13.29	16.07	6.99	16.69	5.24	4.84	1.05	6.12	10.97	9.68	8.06	13.21	1.73	16.16	5.38	3.96	2.39
41	I6_SR1	SilentIntronRegion	0	7.54	5.58	17.52	9.47	6.60	6.03	13.43	16.24	7.07	16.87	5.29	4.89	1.06	6.18	11.09	9.78	8.15	13.35	1.75	16.33	5.44	4.00	2.42
42	E7_Aa	NovelBoundary	0	6.96	19.60	48.70	30.23	39.47	5.00	13.69	42.14	16.26	28.02	10.11	0.00	6.82	4.47	4.45	31.10	4.30	29.76	9.04	21.99	7.85	3.00	0.00
43	ER7a	ExonRegion	0	29.41	17.78	69.59	41.09	21.59	27.74	33.78	48.30	13.67	79.50	76.06	22.35	19.74	55.28	48.92	86.16	45.21	72.17	12.78	35.77	5.02	9.21	7.79
44	E7_Da	NovelBoundary	0	3.48	6.38	32.14	3.16	12.65	0.00	7.73	19.88	3.12	8.60	6.42	0.00	0.00	0.00	8.90	0.00	4.58	8.54	4.71	2.75	2.47	3.12	0.00
45	E7a_E8a	KnownJunction	0	55.79	31.97	98.31	56.97	22.07	30.66	50.70	80.46	14.81	110.62	73.18	13.35	26.30	75.76	63.04	97.58	38.99	106.54	13.74	70.18	5.87	13.66	11.78
46	I7	Intron	0	1.24	3.89	12.35	9.25	2.75	5.39	10.31	13.25	7.03	20.35	1.70	1.05	0.57	2.18	4.87	3.93	4.37	14.45	2.81	7.20	1.30	1.22	0.86
47	I7_SR1	SilentIntronRegion	0	1.25	3.91	12.42	9.31	2.77	5.42	10.37	13.33	7.07	20.46	1.71	1.05	0.57	2.19	4.89	3.95	4.39	14.53	2.83	7.24	1.30	1.23	0.87
48	E8_Aa	NovelBoundary	0	3.41	12.23	25.75	21.54	0.00	0.00	17.62	35.73	11.17	36.10	0.00	0.00	0.00	2.47	0.00	0.00	4.58	23.67	0.00	9.72	5.93	6.25	0.00
49	ER8a	ExonRegion	0	34.62	32.05	98.15	56.66	54.60	32.78	56.16	83.30	22.22	111.93	83.44	34.29	21.33	81.45	71.79	107.87	68.61	96.73	24.32	54.58	14.41	13.15	13.94
50	E8_Da	NovelBoundary	0	0.00	3.35	23.39	14.42	7.64	0.00	16.96	17.54	14.26	36.64	2.58	6.30	6.33	4.71	0.00	7.95	3.93	25.04	0.00	9.20	2.47	0.00	0.00
51	E8a_E9a	KnownJunction	1	19.86	21.90	91.95	55.67	29.03	13.00	42.66	55.37	7.49	80.48	49.01	12.30	35.71	77.05	58.72	117.41	35.72	66.95	23.15	37.71	8.46	13.84	23.73
52	E8a_E10a	KnownJunction	0	10.82	3.09	14.25	5.09	4.33	0.00	6.23	4.89	0.00	5.53	7.90	7.50	0.00	7.42	20.40	8.46	4.02	11.32	4.80	3.26	0.00	0.00	0.00
53	I8	Intron	0	4.03	6.42	17.59	10.44	11.16	4.01	13.34	22.52	7.97	23.24	3.44	2.93	0.78	5.71	5.81	12.51	6.81	14.65	3.48	10.08	2.67	1.43	3.57
54	I8_SR1	SilentIntronRegion	0	4.03	6.43	17.62	10.46	11.17	4.01	13.36	22.56	7.98	23.28	3.45	2.93	0.78	5.72	5.82	12.53	6.82	14.67	3.49	10.09	2.68	1.44	3.57
55	E9_Aa	NovelBoundary	0	0.00	19.01	32.70	40.32	8.06	0.00	22.88	45.72	21.24	35.81	9.90	6.30	0.00	0.00	14.09	7.18	0.00	14.92	0.00	17.32	3.15	3.12	3.33
56	ER9a	ExonRegion	0	20.72	24.65	84.66	55.25	26.59	23.02	50.75	70.31	19.24	92.28	65.72	14.66	16.18	52.84	60.85	65.80	70.35	73.18	17.74	45.03	10.27	10.05	12.45
57	E9_Da	NovelBoundary	0	6.67	21.44	27.85	42.19	19.78	9.71	13.56	57.54	23.00	38.44	4.47	0.00	0.00	4.94	4.45	10.94	4.02	19.94	0.00	21.48	5.56	0.00	0.00
58	E9a_E10a	KnownJunction	0	41.56	48.22	67.95	37.72	18.68	20.10	46.06	70.03	17.77	82.76	52.75	0.00	0.00	62.16	69.72	57.34	55.45	51.07	16.47	55.42	5.93	14.57	12.80
59	I9	Intron	0	5.71	5.41	21.79	26.01	17.39	5.37	10.42	21.83	15.11	25.07	2.28	2.37	1.17	1.98	4.10	7.34	2.13	8.52	5.69	7.92	3.18	1.90	2.79
60	I9_SR1	SilentIntronRegion	0	5.72	5.42	21.82	26.05	17.42	5.37	10.43	21.86	15.13	25.11	2.28	2.37	1.18	1.98	4.11	7.35	2.14	8.53	5.70	7.93	3.19	1.90	2.79
61	E10_Aa	NovelBoundary	0	13.63	6.25	37.88	45.08	11.38	0.00	9.67	37.62	24.62	35.32	0.00	0.00	0.00	0.00	4.45	4.36	0.00	18.03	17.88	9.08	3.15	3.12	4.35
62	ER10a	ExonRegion	0	20.40	34.58	94.55	54.33	32.10	18.81	39.76	77.43	27.93	94.13	56.13	12.70	9.10	49.92	67.04	62.02	33.50	46.54	13.85	36.67	11.13	9.70	9.96
63	IG44	Intergenic	0	6.59	5.19	24.08	24.32	12.47	4.45	9.51	27.75	18.01	34.70	1.51	1.17	1.66	1.65	4.08	4.46	2.42	11.64	7.78	12.43	4.82	1.53	4.83
64	IG44_SR1	SilentIntergenicRegion	0	6.48	5.26	24.35	25.45	13.26	4.61	9.71	28.18	18.49	34.80	1.42	1.28	1.67	1.54	4.00	4.63	2.41	12.20	8.03	12.60	4.76	1.59	4.71
65	IG44_AR1	ActiveIntergenicRegion	0	6.79	5.52	23.54	14.59	6.79	2.42	10.98	26.53	16.27	33.88	3.04	0.00	4.28	4.41	4.62	3.17	3.70	6.46	8.54	11.20	8.33	0.00	8.65
66	IG44_SR2	SilentIntergenicRegion	0	8.40	3.91	19.90	9.96	1.89	2.80	5.33	21.22	10.66	33.87	2.36	0.00	0.03	2.01	5.09	2.24	2.02	4.71	3.13	10.21	4.02	1.27	4.92