Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 VAT1 Gene 0 304.78 397.18 923.53 353.97 480.75 1783.12 358.62 1815.33 1113.24 1397.53 121.46 34.55 22.66 51.88 92.33 56.61 59.88 613.44 607.88 861.71 1580.46 443.47 612.23 2 355653 Transcript 0 408.57 399.76 1045.27 403.64 492.77 2107.34 426.47 2162.32 1357.23 1760.34 135.96 32.92 21.31 58.27 92.09 51.68 72.74 795.46 684.94 1008.81 1774.07 555.69 736.94 3 315674 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ER1a ExonRegion 1 9.27 17.82 22.00 7.64 12.95 206.96 29.02 34.57 20.82 34.21 14.76 0.00 0.00 5.67 10.04 1.18 12.94 49.01 17.39 50.02 58.52 12.70 26.48 5 E1_Ab KnownBoundary 1 51.19 73.41 120.40 29.43 41.26 847.18 148.56 143.96 103.27 129.74 51.59 10.50 0.00 14.77 8.90 4.27 40.49 228.95 66.45 195.78 227.16 39.07 124.80 6 ER1b ExonRegion 0 50.18 85.26 178.71 47.37 79.87 657.31 108.81 366.23 245.33 384.65 35.30 5.69 2.89 21.75 31.07 14.91 19.16 199.76 211.54 312.84 663.10 145.83 242.44 7 E1a_E2a KnownJunction 1 199.29 268.77 686.91 229.21 194.14 1212.31 264.89 1311.49 867.64 1205.22 94.55 0.00 12.99 42.67 71.20 51.10 36.37 626.19 450.65 834.89 1550.18 338.01 463.61 8 ER2a ExonRegion 0 149.18 210.18 772.93 254.11 261.75 1239.74 266.03 1475.38 1072.93 1393.57 103.74 16.96 18.58 60.89 80.84 47.05 49.77 551.19 476.99 1046.31 1753.82 395.93 519.04 9 E2a_E3a KnownJunction 1 167.07 237.92 935.04 362.59 213.33 1024.41 211.98 1779.86 1302.21 1631.41 143.04 0.00 0.00 49.56 103.84 58.70 61.34 705.12 595.69 990.84 1880.07 448.54 515.08 10 E3_Ab NovelBoundary 1 200.41 242.06 914.63 329.99 274.70 1002.66 233.89 1629.00 1084.94 1501.21 96.60 11.55 13.64 57.39 92.22 34.01 83.22 614.67 586.56 1099.57 1825.34 566.04 544.79 11 ER3a ExonRegion 1 115.82 161.70 731.93 234.23 174.48 739.46 181.38 1214.92 915.73 1257.36 103.18 6.42 6.47 47.21 77.03 36.59 62.49 479.71 482.64 838.07 1753.24 459.24 413.05 12 ER3b ExonRegion 1 125.58 180.99 727.05 263.95 188.19 816.04 188.44 1292.31 936.63 1323.15 103.73 10.10 15.63 52.51 88.00 30.71 62.72 514.91 468.25 917.73 1672.62 486.15 476.72 13 ER3c ExonRegion 0 221.52 297.23 919.08 390.37 320.65 1793.08 289.31 1881.12 1371.12 1700.84 143.09 23.02 33.28 64.28 100.12 55.81 68.78 813.86 681.64 1197.87 1909.62 566.86 811.53 14 E3_Db KnownBoundary 0 551.43 417.75 1163.74 426.39 584.97 3122.18 561.18 2362.17 1675.47 1999.23 156.99 30.91 27.60 79.52 114.59 70.41 92.85 944.89 867.13 1255.91 2169.13 577.98 750.94 15 ER3d ExonRegion 0 418.71 409.21 1096.50 424.60 539.97 2857.11 481.62 2407.49 1615.99 2042.08 162.97 40.45 21.44 78.98 78.91 59.02 94.78 988.86 777.41 1185.41 2152.96 558.03 765.62 16 E3_Dc NovelBoundary 1 3.78 6.25 7.21 4.13 0.00 5.45 4.50 7.52 9.78 9.29 0.00 19.21 0.00 12.01 5.69 0.00 0.00 4.31 12.80 0.00 2.84 5.94 3.33 17 E3c_E4a KnownJunction 1 473.19 463.60 1197.98 480.79 717.74 3125.13 589.57 2763.50 1746.71 2301.51 167.57 45.31 25.16 77.11 94.20 37.26 107.90 942.19 741.48 1228.10 2037.54 557.47 783.21 18 ER4a ExonRegion 0 329.05 394.06 1200.39 482.58 524.00 2418.80 497.32 2559.15 1691.68 2166.07 170.35 43.63 16.05 79.17 88.04 51.71 86.81 1097.44 776.98 1205.24 2083.48 651.96 949.12 19 E4_Da NovelBoundary 0 7.56 0.00 12.65 3.83 0.00 2.56 4.42 2.09 9.03 2.79 10.16 29.86 0.00 2.24 4.45 12.99 8.79 1.58 13.65 11.25 0.00 2.76 12.29 20 E4a_E5a KnownJunction 0 390.14 563.45 1292.89 526.57 541.09 2339.51 527.52 2763.17 1661.44 2281.17 129.19 42.61 34.09 63.10 97.90 55.46 69.10 1135.82 970.47 1200.88 2018.51 705.35 1169.82 21 I4_AR1 ActiveIntronRegion 0 8.47 2.03 4.90 6.81 2.68 9.17 14.75 8.64 11.47 4.59 1.93 8.66 4.69 3.25 12.43 5.94 15.09 5.02 0.00 10.64 2.20 2.08 6.29 22 E5_Aa NovelBoundary 0 59.49 12.04 16.20 9.79 8.06 13.12 16.30 34.54 14.61 10.42 2.58 12.45 6.82 0.00 0.00 26.57 0.00 4.39 8.00 0.00 7.85 3.12 4.01 23 ER5a ExonRegion 0 349.41 458.34 1097.46 378.52 481.94 2121.86 385.43 2259.13 1397.47 1809.73 161.61 36.85 30.70 55.45 99.61 70.83 67.68 902.81 732.55 1048.72 1935.38 574.71 772.48 24 E5a_E6a KnownJunction 0 1171.99 580.55 1620.79 611.14 770.88 2929.00 689.38 3148.45 1834.01 2281.33 171.62 30.31 20.13 54.68 157.98 88.27 82.09 856.97 951.65 1294.13 2247.65 945.63 991.41 25 I5_SR1 SilentIntronRegion 0 8.25 3.96 16.61 5.94 9.56 25.00 13.31 30.94 18.52 6.64 1.88 3.31 5.02 1.30 8.48 12.55 9.65 1.79 6.21 8.29 5.73 2.03 2.86 26 E6_Aa NovelBoundary 0 28.60 3.22 21.91 22.27 3.40 27.65 7.64 70.11 30.09 30.52 7.48 12.15 0.00 2.47 10.75 22.81 11.31 7.01 0.00 12.14 10.87 8.82 8.54 27 ER6a ExonRegion 0 409.79 529.78 1152.34 457.01 658.13 2151.64 449.87 2233.10 1310.36 1603.82 141.86 46.99 28.59 57.73 114.09 70.67 70.66 671.09 728.31 949.05 1759.95 509.20 697.59 28 IG11 Intergenic 0 2.96 0.00 5.10 4.26 4.67 1.28 4.62 5.40 9.64 5.37 4.05 7.47 2.70 0.93 11.62 8.31 3.46 0.00 1.11 2.97 3.85 0.73 3.08 29 IG11_SR1 SilentIntergenicRegion 0 3.00 0.00 5.17 4.32 4.74 1.30 4.68 5.47 9.78 5.45 4.11 7.55 2.74 0.95 11.79 8.42 3.51 0.00 1.13 3.01 3.90 0.74 3.12