Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 EZH1 Gene 0 153.32 64.37 128.61 158.09 112.46 190.16 111.88 250.53 153.89 191.57 105.22 82.08 85.12 105.77 82.14 111.63 100.65 88.03 69.00 99.73 99.53 69.17 71.15 2 264646 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 435174 Transcript 0 2.96 2.63 0.00 1.33 0.00 5.62 0.00 0.00 0.00 2.74 0.00 6.30 0.00 0.00 4.45 0.00 0.00 4.10 8.66 2.62 2.72 2.57 0.00 4 428826 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 415827 Transcript 1 25.93 27.69 4.97 16.08 7.81 44.63 12.50 33.60 23.32 28.29 10.16 63.77 20.45 22.13 0.00 19.23 30.67 18.41 9.04 21.03 8.15 8.70 3.33 6 IG44_AR3 ActiveIntergenicRegion 0 21.57 31.02 24.43 31.27 26.84 40.35 30.32 11.70 2.32 20.06 0.48 0.00 0.00 0.84 2.03 0.38 0.83 13.33 29.46 30.59 2.22 1.32 0.74 7 IG44_SR2 SilentIntergenicRegion 0 35.88 52.57 6.14 16.23 34.41 42.77 33.53 5.35 0.50 4.10 0.00 1.06 0.00 0.87 0.46 0.00 1.58 4.99 18.68 17.64 0.35 1.67 1.41 8 IG44_AR2 ActiveIntergenicRegion 0 26.87 46.62 54.63 70.82 43.04 44.98 26.34 22.21 3.49 45.29 0.30 1.22 0.72 0.21 1.08 0.00 3.06 8.80 22.09 33.17 1.02 0.64 1.81 9 ER1a ExonRegion 0 80.77 33.53 14.11 12.39 55.63 68.62 62.56 33.48 30.39 32.38 15.69 0.00 1.53 17.71 17.27 18.59 35.70 16.54 23.63 33.10 20.70 7.17 20.56 10 E1a_E2a KnownJunction 0 364.36 138.92 43.02 38.46 242.02 273.65 252.65 94.68 87.12 94.07 56.75 0.00 6.49 64.34 67.25 75.11 129.22 50.20 97.79 138.25 73.52 30.49 80.58 11 E1a_E3a NovelJunction 0 17.48 9.60 4.35 1.63 11.63 27.71 25.66 12.16 5.64 3.95 5.16 0.00 0.00 7.42 10.51 3.93 4.49 0.00 0.00 0.00 5.62 2.51 11.95 12 I1_SR2 SilentIntronRegion 0 26.32 20.34 13.40 38.25 24.08 14.79 17.87 19.01 5.33 10.61 1.93 3.79 17.88 1.62 8.89 11.89 0.00 1.85 3.98 24.47 2.75 3.26 6.79 13 I1_AR1 ActiveIntronRegion 0 14.95 10.19 12.49 37.02 21.29 11.01 17.64 15.91 6.86 10.34 2.61 8.75 16.65 0.82 3.29 4.46 3.31 4.86 2.92 23.18 0.61 3.01 5.34 14 I1_AR2 ActiveIntronRegion 0 3.69 2.53 4.54 12.61 23.95 8.21 10.87 8.33 6.41 5.10 0.00 0.00 1.92 0.00 2.21 8.87 4.11 0.69 1.58 9.53 1.64 1.56 5.11 15 ER2a ExonRegion 0 158.30 80.61 39.56 41.43 136.08 157.24 126.68 115.52 100.57 102.35 46.62 21.69 26.80 36.75 21.20 62.77 78.17 45.18 50.97 81.08 42.67 25.46 52.34 16 E2a_E3a KnownJunction 1 16.89 12.04 7.72 9.26 55.09 69.56 87.31 41.16 39.21 32.07 6.69 36.46 34.90 9.24 0.00 12.39 24.03 13.89 31.34 48.00 11.31 2.94 17.41 17 E3_Aa NovelBoundary 0 260.19 100.05 4.79 19.48 61.88 45.77 75.65 16.84 11.23 10.85 0.00 0.00 14.77 0.00 5.19 0.00 0.00 1.87 4.80 16.30 2.84 6.25 4.35 18 ER3a ExonRegion 0 36.64 35.10 54.89 76.70 52.51 42.49 45.98 176.56 122.36 127.80 67.50 79.69 61.48 63.47 38.46 76.00 112.18 58.29 59.70 123.39 71.86 50.46 56.78 19 E3a_E4a KnownJunction 1 24.52 35.59 83.29 84.64 73.43 27.54 43.01 197.03 157.55 132.24 53.43 70.97 112.98 59.57 20.03 126.63 52.36 96.46 59.58 76.57 55.85 70.11 79.05 20 ER4a ExonRegion 1 48.29 78.95 79.73 105.50 129.51 195.72 149.20 194.69 158.76 159.25 88.93 141.33 104.53 74.55 43.38 69.95 90.79 71.05 56.65 92.54 78.15 81.81 60.60 21 E4_Da NovelBoundary 0 10.74 25.85 12.63 15.88 18.76 0.00 6.09 9.57 14.24 8.86 7.11 25.66 0.00 2.47 9.64 4.36 18.05 4.23 12.52 5.94 2.41 3.12 3.24 22 E4a_E5a KnownJunction 0 189.37 137.28 60.55 101.29 85.65 95.74 100.47 191.65 149.56 113.92 82.49 124.39 71.91 76.76 26.08 35.80 55.54 26.16 22.21 70.50 56.03 73.91 42.25 23 E4a_E6a KnownJunction 1 25.93 27.69 4.97 16.08 7.81 44.63 12.50 33.60 23.32 28.29 10.16 63.77 20.45 22.13 0.00 19.23 30.67 18.41 9.04 21.03 8.15 8.70 3.33 24 E4a_E7a KnownJunction 0 2.96 2.63 0.00 1.33 0.00 5.62 0.00 0.00 0.00 2.74 0.00 6.30 0.00 0.00 4.45 0.00 0.00 4.10 8.66 2.62 2.72 2.57 0.00 25 E5_Aa NovelBoundary 0 34.45 24.60 15.46 40.39 44.40 29.53 51.05 41.90 22.51 20.33 7.37 6.30 26.62 0.00 14.83 15.81 17.02 13.68 9.51 32.60 5.68 5.27 8.54 26 ER5a ExonRegion 1 162.81 87.77 85.69 115.55 95.88 99.42 104.27 198.64 152.25 152.36 108.52 176.75 175.52 94.65 45.74 88.10 80.65 62.42 67.82 85.62 50.24 88.55 43.44 27 E5a_E6a KnownJunction 1 180.40 52.16 74.69 115.30 88.96 112.04 103.65 205.04 129.74 146.72 55.28 207.82 153.40 105.01 47.22 55.97 82.56 50.32 48.85 119.08 34.84 70.42 45.67 28 ER6a ExonRegion 1 130.09 78.05 82.01 111.90 90.47 133.19 91.13 218.66 169.23 184.59 89.04 167.27 147.45 141.04 53.30 85.97 120.33 57.91 62.18 130.96 57.06 82.43 60.92 29 E6a_E7a KnownJunction 1 111.06 89.19 92.52 142.01 113.16 122.03 116.28 236.42 195.98 212.29 92.66 156.80 166.39 146.39 67.25 135.18 144.83 89.83 72.85 138.32 73.70 117.94 107.81 30 ER7a ExonRegion 1 82.08 74.77 84.21 119.78 99.79 173.10 126.73 231.11 201.06 194.73 102.74 196.02 218.76 142.78 75.37 140.51 150.27 103.95 94.59 155.62 116.76 96.47 106.05 31 E7a_E8a KnownJunction 1 92.61 75.25 106.71 148.80 90.49 272.23 117.74 307.27 231.25 237.62 151.20 252.83 353.55 176.06 40.42 200.97 156.52 106.37 156.90 163.63 118.49 140.78 119.85 32 E7a_E11a NovelJunction 0 9.93 10.98 17.18 17.61 41.17 18.91 13.29 43.25 20.31 31.29 14.79 31.51 6.82 11.60 5.69 3.93 17.02 32.21 21.55 26.46 6.30 15.86 7.60 33 ER8a ExonRegion 1 72.66 63.67 90.18 137.84 125.79 210.05 127.37 299.83 228.41 240.84 138.89 199.16 235.37 142.18 86.76 180.84 147.87 133.34 111.02 153.81 131.84 112.49 108.31 34 E8a_E9a KnownJunction 1 118.76 54.92 112.47 201.61 111.63 229.64 143.71 336.48 245.28 245.68 138.56 148.25 292.35 162.64 80.23 124.84 158.11 157.52 130.45 179.42 149.75 138.45 121.04 35 I8_AR1 ActiveIntronRegion 0 15.89 9.18 6.98 15.89 9.07 7.36 14.89 14.55 10.62 9.86 3.24 12.40 8.15 0.85 3.71 8.92 12.16 2.98 2.58 24.65 1.92 2.88 6.95 36 ER9a ExonRegion 1 113.74 53.21 102.50 158.25 94.89 181.22 96.66 289.26 179.26 215.69 119.92 181.65 244.28 125.76 69.95 181.88 143.13 135.81 107.91 139.62 145.14 107.75 102.55 37 E9a_E10a KnownJunction 1 226.56 50.19 101.92 120.50 174.11 312.49 174.53 271.29 148.06 166.89 116.45 167.15 233.59 131.73 100.75 150.13 139.60 80.01 87.63 118.63 143.63 72.87 82.80 38 E10_Aa NovelBoundary 1 53.19 18.15 23.42 21.84 19.44 23.00 52.69 13.68 2.66 13.19 9.32 12.60 54.38 7.30 18.54 19.14 12.44 8.42 8.00 20.20 2.72 15.00 11.01 39 ER10a ExonRegion 1 134.54 43.37 75.12 108.29 103.07 228.99 141.36 209.05 129.58 153.07 99.92 136.38 181.38 116.25 62.44 114.56 96.66 100.70 77.38 125.79 93.20 58.93 72.87 40 E10a_E11a KnownJunction 1 220.85 46.31 103.25 139.18 136.16 305.28 179.57 239.01 169.67 170.12 128.19 148.40 178.24 104.60 19.28 206.36 142.31 128.22 147.58 107.76 103.54 102.63 102.01 41 ER11a ExonRegion 0 83.16 45.01 78.07 93.75 52.66 140.45 87.33 195.63 151.68 167.25 96.67 118.47 126.73 99.69 52.35 100.67 103.29 100.18 65.48 113.45 107.86 59.94 61.51 42 E11a_E12a KnownJunction 0 86.16 83.87 90.95 126.32 58.49 139.52 118.05 235.93 178.33 221.48 111.19 146.00 136.03 120.55 81.34 181.23 142.22 150.14 103.25 125.60 109.53 86.52 102.44 43 ER12a ExonRegion 0 59.27 44.46 101.07 125.55 93.76 189.88 109.13 263.08 182.12 220.54 103.26 118.85 141.20 116.23 74.36 138.92 118.65 135.65 96.60 126.78 127.11 76.12 98.13 44 E12a_E13a KnownJunction 0 59.57 50.32 200.82 173.34 81.15 126.12 91.68 368.72 244.73 312.75 158.09 125.59 71.42 147.10 118.80 240.36 125.76 159.47 148.24 154.23 119.79 107.34 171.49 45 ER13a ExonRegion 0 83.69 42.75 140.68 139.22 94.49 164.72 94.61 319.78 231.93 236.54 147.99 104.66 148.65 120.36 74.01 151.35 160.99 123.86 115.37 131.61 147.72 81.94 133.97 46 E13a_E14a KnownJunction 0 39.93 39.53 54.14 107.05 52.38 142.19 63.02 166.56 150.06 159.00 87.97 81.93 113.47 132.09 64.16 110.83 112.76 71.88 56.28 121.19 115.21 86.95 40.72 47 ER14a ExonRegion 0 64.79 49.95 98.24 115.58 72.77 165.62 90.93 275.33 200.33 236.93 107.16 105.07 129.95 138.68 53.28 135.99 139.12 111.00 71.40 105.14 130.88 80.65 53.29 48 E14a_E15a KnownJunction 0 121.50 67.95 132.61 112.61 118.59 230.38 151.61 338.37 218.81 267.01 126.24 121.99 152.75 167.23 80.60 156.37 151.85 121.25 118.78 119.01 174.52 67.17 57.62 49 ER15a ExonRegion 0 62.54 48.43 102.81 110.65 73.80 150.17 79.09 224.16 188.12 195.19 88.88 128.10 129.98 104.52 76.68 109.38 103.98 95.20 70.48 124.42 126.94 55.46 71.34 50 E15a_E16a KnownJunction 1 41.34 55.32 113.42 138.34 120.54 195.46 104.67 236.63 191.11 172.32 88.71 79.98 142.85 78.05 71.82 101.85 99.30 94.43 75.48 92.81 132.33 59.70 57.79 51 ER16a ExonRegion 0 62.92 38.65 93.30 117.21 87.66 136.90 69.90 168.04 138.35 149.51 88.17 73.33 91.55 106.33 59.97 82.70 90.36 102.84 61.20 79.48 122.12 51.94 51.58 52 E16a_E17a KnownJunction 1 129.06 47.49 101.80 113.87 78.27 207.44 37.41 170.25 136.60 160.15 61.49 85.38 106.65 113.66 77.01 91.43 103.88 79.47 80.10 58.87 112.99 60.56 55.40 53 ER17a ExonRegion 0 95.79 47.03 95.23 111.66 109.04 167.74 103.43 173.71 126.39 159.89 68.64 76.62 76.41 109.97 51.23 68.08 92.29 82.05 33.74 70.28 90.08 45.90 44.05 54 E17a_E18a KnownJunction 1 147.58 87.42 136.72 155.79 273.60 251.33 222.49 210.22 133.88 181.51 86.92 132.04 77.43 121.31 79.98 63.91 118.19 70.18 42.82 101.95 95.38 37.35 58.99 55 ER18a ExonRegion 0 70.10 76.01 105.53 123.86 157.87 247.83 182.98 168.04 136.31 156.48 106.29 74.02 92.60 104.58 58.49 88.77 107.20 85.02 66.00 80.70 84.06 61.03 46.88 56 E18a_E19a KnownJunction 1 60.23 57.69 130.54 125.36 265.37 289.95 229.38 211.45 169.33 190.18 82.23 100.68 153.56 131.09 35.23 116.64 104.35 97.42 60.61 96.00 100.26 45.86 33.29 57 ER19a ExonRegion 0 44.76 45.52 98.36 104.82 173.76 199.73 111.52 185.54 150.61 155.37 112.01 96.80 73.01 111.90 53.69 96.36 100.90 85.86 56.20 87.42 87.60 66.80 47.60 58 E19_Da NovelBoundary 1 29.19 12.37 73.42 97.72 8.66 27.60 31.49 191.49 78.24 111.29 44.38 24.31 121.42 52.68 41.66 45.71 65.08 19.81 22.31 54.20 47.57 50.33 28.26 59 E19a_E20a KnownJunction 0 20.89 45.19 101.42 89.07 47.88 114.65 48.14 139.41 125.35 115.51 83.81 42.91 55.84 67.63 28.06 51.27 86.96 65.33 16.75 81.88 71.41 34.23 30.90 60 I19 Intron 0 115.62 33.30 56.98 92.41 125.29 218.30 136.05 159.66 58.66 105.57 60.54 45.43 60.77 73.55 46.03 67.29 56.59 19.89 50.77 37.89 25.68 43.06 51.64 61 I19_AR1 ActiveIntronRegion 1 116.12 33.44 57.23 92.81 125.83 219.24 136.64 160.35 58.91 106.02 60.80 45.62 61.03 73.86 46.21 67.58 56.84 19.98 50.99 38.05 25.78 43.24 51.87 62 E20_Aa NovelBoundary 1 48.75 23.42 104.22 107.05 76.66 85.86 77.73 210.79 69.79 139.63 40.64 103.83 54.54 34.55 26.58 76.13 62.09 45.89 26.54 42.76 24.96 35.27 55.57 63 ER20a ExonRegion 0 69.82 51.65 105.19 149.18 89.40 181.16 101.51 261.53 157.35 204.15 127.48 84.45 64.94 147.70 101.58 139.86 113.24 79.74 132.21 104.33 89.68 116.51 89.20 64 E20_Da NovelBoundary 0 31.49 24.01 47.51 63.93 59.59 38.22 53.35 33.35 23.38 28.98 10.16 0.00 0.00 9.42 10.75 12.90 31.98 24.79 26.45 23.07 13.41 4.84 12.38 65 E20a_E21a KnownJunction 0 80.16 48.35 105.94 155.79 88.03 115.96 113.90 373.32 195.57 277.73 176.83 51.32 73.70 146.04 61.07 92.88 123.98 72.88 83.01 87.25 157.10 87.20 42.43 66 I20 Intron 0 11.78 10.23 29.51 24.07 13.93 21.73 19.97 23.59 10.58 15.35 5.55 3.34 3.96 5.42 5.00 7.47 13.63 20.78 13.73 22.54 7.12 5.99 12.13 67 I20_SR1 SilentIntronRegion 0 15.60 12.19 30.84 29.50 17.38 25.02 24.06 26.10 10.89 17.57 5.95 3.16 3.31 3.92 3.02 7.37 15.50 18.98 16.02 21.95 6.77 5.80 14.33 68 I20_AR1 ActiveIntronRegion 0 5.56 7.11 27.85 15.37 8.38 16.59 13.45 19.80 10.26 11.88 4.99 3.71 5.14 8.06 8.43 7.78 10.75 24.21 10.13 23.97 7.83 6.41 8.64 69 E21_Aa NovelBoundary 0 12.00 8.16 92.16 89.43 12.05 35.55 31.44 64.08 24.91 34.22 12.79 0.00 6.82 7.83 4.45 16.32 17.58 30.14 21.37 37.58 5.75 14.33 11.18 70 ER21a ExonRegion 0 221.97 72.64 169.35 203.57 127.88 219.27 119.80 285.41 146.22 206.40 112.43 41.15 36.25 103.22 103.89 112.76 89.36 81.79 61.52 87.00 98.01 65.44 69.50 71 IG43 Intergenic 0 5.34 1.47 13.50 4.03 5.79 7.93 10.74 6.50 2.99 4.93 3.83 3.86 1.99 1.14 5.23 4.82 4.76 7.94 5.74 10.35 1.59 1.88 6.88 72 IG43_AR1 ActiveIntergenicRegion 0 8.47 5.42 16.54 7.95 3.12 12.53 21.62 5.47 4.73 4.59 5.80 0.00 0.78 0.00 8.70 0.00 11.00 16.32 0.00 10.64 1.10 2.08 11.26 73 IG43_SR1 SilentIntergenicRegion 0 6.30 2.12 17.83 5.81 11.27 7.51 13.87 7.54 2.60 4.16 5.78 11.61 2.10 2.07 6.45 3.23 3.69 10.58 6.91 9.60 3.52 2.35 8.68