Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KCNH4 Gene 0 8.84 29.31 199.72 51.98 22.87 103.40 53.26 46.48 14.15 91.28 2.51 0.56 0.55 2.42 4.23 1.35 0.82 73.38 105.93 93.95 0.17 0.05 0.15 2 264661 Transcript 0 7.55 28.89 199.54 52.19 25.72 115.14 54.97 45.25 13.86 90.47 2.94 1.07 0.34 2.97 5.50 1.48 1.05 72.98 109.04 97.72 0.07 0.03 0.23 3 ER1a ExonRegion 0 2.11 6.28 32.91 7.04 3.93 30.61 9.92 5.48 4.10 19.55 0.97 0.00 0.00 0.79 1.67 0.00 0.82 18.00 34.70 33.57 0.00 0.00 0.00 4 E1a_E2a KnownJunction 0 0.00 24.80 124.06 34.49 27.16 66.33 26.23 24.56 12.76 53.43 0.00 0.00 0.00 4.59 16.56 0.00 0.00 40.38 76.24 79.83 0.00 0.00 0.00 5 ER2a ExonRegion 0 3.52 22.66 128.76 27.96 14.08 61.31 38.77 42.04 17.91 79.97 3.16 0.00 0.00 2.46 5.55 0.90 0.00 58.65 78.74 108.59 0.00 0.00 0.00 6 E2_Da NovelBoundary 0 0.00 12.04 11.03 2.06 8.49 2.50 14.00 5.26 4.98 18.75 0.00 0.00 0.00 2.47 0.00 0.00 0.00 22.26 12.42 24.74 0.00 0.00 0.00 7 E2a_E3a KnownJunction 0 6.96 23.88 125.51 25.54 11.71 76.21 33.21 38.16 18.52 78.68 4.63 0.00 0.00 2.47 8.78 4.36 0.00 67.15 59.11 125.28 0.00 0.00 0.00 8 E2a_E4a NovelJunction 0 0.00 3.35 16.35 7.79 0.00 4.88 14.22 8.26 1.77 19.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.40 8.56 5.37 0.00 0.00 0.00 9 E3_Aa NovelBoundary 0 3.04 2.89 27.94 2.83 6.62 18.63 17.09 7.68 1.33 17.30 0.00 0.00 0.00 2.12 0.00 0.00 0.00 38.39 13.08 35.54 0.00 0.00 0.00 10 ER3a ExonRegion 0 8.13 34.07 166.97 41.24 21.28 98.10 57.82 45.28 15.31 103.48 6.43 0.00 0.00 1.57 5.09 3.76 1.15 96.43 115.45 112.20 0.76 0.00 0.00 11 E3a_E4a KnownJunction 0 2.96 22.17 163.92 39.09 24.79 138.27 64.30 39.31 9.00 98.26 0.00 0.00 0.00 0.00 4.45 3.08 0.00 103.55 82.92 123.42 0.00 0.00 0.00 12 E4_Aa NovelBoundary 0 0.00 0.00 18.36 2.06 4.33 22.43 18.81 16.31 0.00 7.82 1.95 0.00 0.00 0.00 0.00 0.00 0.00 6.96 18.54 19.49 0.00 0.00 0.00 13 ER4a ExonRegion 0 6.73 27.18 170.11 49.37 22.85 112.42 63.29 39.34 13.17 90.88 4.68 0.51 0.00 3.36 4.87 4.18 1.32 101.31 106.54 119.63 0.88 0.00 0.00 14 E4_Da NovelBoundary 0 6.74 20.19 25.55 4.86 11.71 7.38 18.06 16.35 0.00 24.04 2.68 0.00 0.00 0.00 4.45 0.00 0.00 39.51 43.11 26.53 0.00 0.00 0.00 15 E4a_E5a KnownJunction 0 3.26 33.88 206.65 69.22 36.59 105.34 66.55 52.53 12.50 101.51 2.16 6.00 0.00 2.47 4.45 4.36 0.00 90.33 166.50 115.82 0.00 0.00 0.00 16 I4 Intron 0 2.81 6.81 24.68 5.98 7.57 10.70 12.92 8.78 2.34 12.63 0.67 0.00 0.22 0.15 0.00 0.51 0.00 15.38 22.26 17.70 0.00 0.12 0.00 17 I4_SR1 SilentIntronRegion 0 2.82 6.83 24.73 6.00 7.58 10.72 12.95 8.80 2.34 12.66 0.67 0.00 0.22 0.15 0.00 0.52 0.00 15.42 22.31 17.74 0.00 0.12 0.00 18 ER5a ExonRegion 0 8.93 31.52 242.12 81.48 27.77 124.04 71.76 63.68 20.76 130.71 4.26 1.67 0.88 7.32 11.33 3.15 0.60 101.43 157.81 151.14 0.00 0.44 0.00 19 E5a_E6a KnownJunction 0 21.26 49.79 252.98 81.08 47.37 258.66 129.04 70.73 17.13 135.04 9.37 6.30 0.00 16.42 31.89 4.19 8.13 97.83 197.75 234.58 0.00 0.00 0.00 20 I5 Intron 0 1.70 4.91 44.36 3.27 3.01 15.05 9.16 9.53 1.78 12.65 0.62 0.00 0.62 0.00 0.33 0.00 1.06 10.63 17.42 11.98 0.00 0.00 0.00 21 I5_SR1 SilentIntronRegion 0 1.71 4.94 44.64 3.29 3.03 15.14 9.22 9.59 1.79 12.73 0.63 0.00 0.63 0.00 0.33 0.00 1.07 10.70 17.53 12.05 0.00 0.00 0.00 22 E6_Aa NovelBoundary 0 3.70 3.35 55.50 15.68 4.24 5.68 16.47 15.57 2.84 18.99 0.00 0.00 0.00 0.00 4.45 0.00 0.00 10.65 4.33 34.83 0.00 0.00 0.00 23 ER6a ExonRegion 0 7.85 39.00 218.22 70.56 36.46 154.16 82.90 61.37 16.79 120.14 7.35 1.18 7.36 6.87 9.22 2.26 4.18 108.19 180.96 160.57 0.00 0.00 0.00 24 E6a_E7a KnownJunction 0 3.70 49.93 212.38 62.53 31.24 160.08 63.51 46.00 17.48 93.56 8.69 12.60 0.00 6.89 5.56 0.00 3.83 66.70 163.39 115.75 0.00 0.00 0.00 25 ER7a ExonRegion 0 4.13 17.42 162.46 46.77 19.33 84.85 45.19 43.21 13.44 86.73 2.12 3.83 0.00 4.86 8.09 0.73 4.17 63.76 110.14 108.93 0.00 0.00 0.72 26 E7_Da NovelBoundary 0 20.52 23.81 97.42 24.34 16.55 48.89 39.39 31.79 8.62 45.05 4.37 6.00 13.64 0.00 4.45 0.00 3.83 24.58 12.14 51.45 0.00 0.00 0.00 27 E7a_E8a KnownJunction 0 3.56 15.59 104.85 32.30 32.68 99.66 41.60 35.24 16.35 62.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62.93 77.65 103.87 0.00 0.00 0.00 28 E7a_E9a NovelJunction 0 0.00 0.00 27.65 1.83 0.00 2.33 2.21 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 2.07 11.39 2.62 0.00 0.00 0.00 29 I7 Intron 0 3.26 8.72 53.99 7.59 7.06 23.38 24.88 11.89 1.62 20.29 1.49 0.00 1.27 0.86 4.24 0.33 1.09 19.29 24.16 28.30 0.00 0.23 0.00 30 I7_SR1 SilentIntronRegion 0 3.27 8.75 54.22 7.62 7.09 23.48 24.99 11.94 1.63 20.38 1.49 0.00 1.28 0.86 4.26 0.33 1.09 19.37 24.26 28.42 0.00 0.23 0.00 31 E8_Aa NovelBoundary 0 0.00 6.05 93.34 10.62 4.07 21.98 24.42 9.69 3.41 27.72 0.00 0.00 0.00 0.00 0.00 3.50 0.00 27.11 21.93 49.41 0.00 0.00 0.00 32 ER8a ExonRegion 0 5.51 18.98 155.58 42.26 17.45 99.73 48.14 47.02 16.43 81.67 1.17 0.00 2.02 0.71 5.31 1.55 0.05 69.40 93.31 111.81 0.00 0.00 0.00 33 E8_Da NovelBoundary 0 0.00 4.93 124.51 26.50 7.89 20.44 22.66 14.01 3.96 25.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.03 12.99 30.30 0.00 0.00 0.00 34 E8a_E9a KnownJunction 0 7.04 8.75 88.17 44.55 18.85 91.59 19.87 54.05 14.09 65.52 2.42 0.00 0.00 2.24 0.00 0.00 0.00 56.54 81.70 101.63 0.00 0.00 0.00 35 I8 Intron 0 1.93 3.33 32.26 4.44 3.90 17.37 13.75 1.41 3.69 12.76 1.06 0.00 0.00 0.45 0.75 0.00 0.00 16.56 16.25 19.38 0.00 0.00 0.00 36 I8_AR1 ActiveIntronRegion 0 1.94 3.35 32.49 4.47 3.93 17.49 13.84 1.42 3.71 12.85 1.06 0.00 0.00 0.46 0.75 0.00 0.00 16.68 16.36 19.52 0.00 0.00 0.00 37 E9_Aa NovelBoundary 0 0.00 8.75 180.04 34.63 6.79 16.35 37.23 13.80 5.12 33.90 2.58 0.00 0.00 0.00 0.00 0.00 0.00 43.73 51.11 38.93 0.00 0.00 0.00 38 ER9a ExonRegion 0 1.98 17.42 171.73 40.47 12.63 73.72 46.57 47.14 13.52 83.71 2.90 0.00 0.00 1.60 5.19 1.46 0.84 52.50 61.48 105.73 0.00 0.00 0.00 39 E9_Da NovelBoundary 0 0.00 14.14 134.89 36.56 27.67 57.24 13.91 10.39 4.80 28.80 2.58 0.00 0.00 2.41 0.00 4.19 0.00 29.10 52.24 63.79 0.00 0.00 0.00 40 E9a_E10a KnownJunction 0 2.89 5.85 120.25 26.37 15.45 86.94 51.45 36.88 12.50 70.59 2.00 0.00 0.00 0.00 5.19 0.00 0.00 70.76 54.78 69.16 0.00 0.00 0.00 41 I9 Intron 0 4.33 17.86 99.57 28.94 25.67 54.08 45.20 17.71 4.93 33.16 0.82 0.13 0.14 0.23 0.98 0.31 0.00 25.78 43.82 50.21 0.00 0.22 0.41 42 I9_SR1 SilentIntronRegion 0 4.34 17.89 99.71 28.98 25.70 54.15 45.27 17.74 4.94 33.20 0.82 0.13 0.14 0.23 0.98 0.31 0.00 25.82 43.88 50.28 0.00 0.22 0.41 43 E10_Aa NovelBoundary 0 23.26 69.33 185.36 67.02 30.14 103.58 95.83 43.00 6.83 78.97 0.00 0.00 0.00 0.00 0.00 3.76 0.00 70.14 62.68 74.72 0.00 0.00 0.00 44 ER10a ExonRegion 0 9.96 35.46 225.35 54.34 33.12 110.85 75.39 46.35 14.03 96.56 3.98 0.00 0.00 1.09 2.15 2.96 0.67 91.30 104.31 94.25 0.00 0.43 0.00 45 E10_Da NovelBoundary 0 12.52 15.66 55.08 14.98 4.33 19.14 7.86 9.12 1.59 14.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.24 21.84 6.52 0.00 0.00 0.00 46 E10a_E11a KnownJunction 0 3.33 36.57 251.11 63.13 41.26 156.50 98.13 26.57 14.93 95.63 5.16 0.00 0.00 0.00 4.45 3.50 0.00 78.14 96.19 92.74 0.00 0.00 0.00 47 ER11a ExonRegion 0 9.42 36.31 303.18 74.35 26.26 134.17 76.38 67.03 14.24 131.89 2.20 0.00 0.00 2.22 4.91 0.74 0.90 96.70 120.65 104.88 0.00 0.00 0.00 48 E11_Da NovelBoundary 0 3.78 0.00 90.30 36.89 8.40 19.02 38.20 20.66 6.08 43.95 0.00 0.00 0.00 2.47 4.45 0.00 0.00 14.05 20.99 35.35 0.00 0.00 0.00 49 E11a_E12a KnownJunction 0 16.82 33.15 335.17 87.90 28.27 170.92 56.44 48.39 19.97 141.13 9.63 0.00 0.00 7.30 5.19 0.00 4.39 91.74 209.51 123.62 0.00 0.00 0.00 50 I11 Intron 0 2.48 4.61 50.71 13.19 5.44 15.06 25.89 9.68 3.17 17.51 0.30 0.28 0.00 0.10 0.32 0.00 0.00 13.22 22.67 15.31 0.00 0.00 0.00 51 I11_SR1 SilentIntronRegion 0 2.49 4.63 50.86 13.23 5.46 15.11 25.97 9.71 3.18 17.57 0.30 0.28 0.00 0.10 0.32 0.00 0.00 13.26 22.74 15.36 0.00 0.00 0.00 52 E12_Aa NovelBoundary 0 0.00 11.91 60.14 21.18 0.00 12.61 7.82 16.92 0.00 37.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.53 29.93 15.21 0.00 0.00 0.00 53 ER12a ExonRegion 0 7.11 25.39 279.54 63.78 23.94 130.48 34.08 46.67 14.16 111.51 5.65 0.00 0.00 3.54 6.92 0.00 2.96 85.75 155.02 84.40 0.00 0.00 0.00 54 E12_Da NovelBoundary 0 0.00 2.83 62.65 15.42 0.00 20.22 22.48 19.02 6.77 36.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.75 30.97 34.26 0.00 0.00 0.00 55 E12a_E13a KnownJunction 0 0.00 24.67 237.90 50.54 20.12 132.48 30.56 51.84 14.58 87.49 0.00 0.00 0.00 2.41 4.45 0.00 0.00 68.52 121.51 62.26 0.00 0.00 0.00 56 I12 Intron 0 3.79 3.64 44.66 13.33 11.17 20.78 23.69 12.29 2.20 30.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.90 17.10 19.04 0.00 0.00 0.00 57 I12_SR1 SilentIntronRegion 0 3.83 3.68 45.19 13.48 11.30 21.02 23.97 12.43 2.22 30.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.11 17.30 19.26 0.00 0.00 0.00 58 E13_Aa NovelBoundary 0 0.00 11.05 83.56 27.14 7.98 16.92 32.55 35.78 7.55 48.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41.54 27.20 6.26 0.00 0.00 0.00 59 ER13a ExonRegion 0 7.51 28.12 230.11 42.03 16.94 104.99 46.05 37.48 12.31 97.61 1.96 0.00 1.12 2.21 1.45 0.43 0.00 75.16 106.14 76.87 0.00 0.00 0.00 60 E13_Da NovelBoundary 0 3.41 11.71 106.44 22.77 7.64 47.59 31.27 41.44 3.10 52.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.72 51.20 29.59 0.00 0.00 0.00 61 E13a_E14a KnownJunction 0 12.45 21.18 190.09 42.22 7.64 88.98 37.94 30.44 4.69 67.32 0.00 0.00 0.00 2.30 0.00 0.00 0.00 55.38 96.19 49.66 0.00 0.00 0.00 62 I13 Intron 0 0.80 6.51 47.77 13.00 8.06 32.79 19.43 25.69 3.12 25.41 0.00 0.00 0.00 0.00 0.00 1.12 0.00 17.63 17.38 20.82 0.00 0.00 0.00 63 I13_SR1 SilentIntronRegion 0 0.80 6.55 48.12 13.09 8.12 33.02 19.58 25.88 3.14 25.60 0.00 0.00 0.00 0.00 0.00 1.13 0.00 17.76 17.49 20.98 0.00 0.00 0.00 64 E14_Aa NovelBoundary 0 0.00 6.12 67.41 22.51 8.66 7.95 30.83 40.46 4.31 16.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.55 44.42 12.40 0.00 0.00 0.00 65 ER14a ExonRegion 0 13.75 37.86 232.59 55.93 20.56 110.23 54.29 50.71 13.14 100.05 1.66 0.00 0.00 3.61 2.87 0.75 0.00 65.88 117.59 68.16 0.00 0.00 0.85 66 E14a_E15a KnownJunction 0 16.82 57.29 308.74 68.82 35.23 140.66 79.36 63.58 13.89 116.10 2.11 0.00 0.00 2.47 4.45 4.36 0.00 65.16 100.24 84.69 0.00 0.00 4.27 67 E15_Aa NovelBoundary 0 5.78 7.70 24.90 6.09 6.96 24.64 32.06 8.67 0.00 7.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.93 22.02 33.17 0.00 0.00 0.00 68 ER15a ExonRegion 0 4.09 38.12 298.84 63.96 45.89 192.52 69.20 55.12 15.00 99.69 0.24 0.00 0.00 1.73 2.82 0.96 0.00 74.03 96.72 82.09 0.00 0.00 0.79 69 E15_Da NovelBoundary 0 0.00 6.38 60.76 12.82 4.24 13.86 31.13 13.84 1.74 9.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.96 9.41 8.25 0.00 0.00 0.00 70 E15a_E16a KnownJunction 0 0.00 27.50 287.63 82.94 60.02 181.26 83.51 37.58 11.66 84.10 0.00 0.00 0.00 2.47 4.45 0.00 0.00 94.35 151.35 64.62 0.00 0.00 0.00 71 E16_Aa NovelBoundary 0 0.00 9.21 107.80 15.85 18.68 5.56 23.98 14.09 2.95 17.14 0.00 0.00 0.00 0.00 0.00 0.00 4.11 11.03 4.42 15.66 0.00 0.00 0.00 72 ER16a ExonRegion 0 10.43 36.25 279.02 74.09 28.64 136.38 61.40 58.54 17.55 106.64 1.26 0.01 0.00 1.92 2.67 1.29 0.00 91.86 134.53 90.89 0.64 0.00 0.21 73 E16_Da NovelBoundary 0 3.19 18.75 141.39 57.54 69.52 227.77 112.44 37.99 7.90 59.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48.29 67.11 68.39 0.00 0.00 0.00 74 E16a_E17a KnownJunction 0 0.00 9.41 123.98 18.78 0.00 5.51 2.25 28.14 4.57 31.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.90 9.98 8.82 0.00 0.00 0.00 75 I16 Intron 0 5.54 17.98 128.86 52.04 30.45 76.56 43.03 37.53 10.55 50.93 1.90 0.00 0.32 1.88 1.96 0.00 0.81 38.88 78.22 43.89 0.00 0.00 0.00 76 I16_SR1 SilentIntronRegion 0 5.56 18.03 129.26 52.21 30.54 76.81 43.17 37.65 10.58 51.09 1.90 0.00 0.32 1.88 1.96 0.00 0.81 39.01 78.47 44.03 0.00 0.00 0.00 77 E17_Aa NovelBoundary 0 26.15 46.04 304.72 147.37 37.52 70.70 33.56 136.49 23.29 102.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30.59 46.87 70.24 0.00 0.00 0.00 78 ER17a ExonRegion 0 37.05 57.09 154.04 57.06 39.31 81.58 49.00 52.64 11.06 63.26 0.88 3.23 0.00 0.00 1.48 0.00 0.75 29.51 79.39 55.20 0.00 0.00 0.67