Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NSF Gene 0 78.41 112.43 175.69 141.34 229.58 190.77 196.65 357.76 249.43 256.53 84.47 257.49 122.97 187.20 215.10 285.96 238.86 140.56 94.37 192.85 135.85 132.25 93.98 2 398238 Transcript 0 5.21 24.01 12.96 4.11 27.22 73.67 55.25 32.94 23.40 27.77 12.34 3.33 0.00 18.77 23.82 71.62 42.47 41.36 9.49 36.50 18.10 13.18 28.07 3 486366 Transcript 0 2.80 1.74 2.25 5.42 6.21 0.97 4.62 5.98 4.19 1.19 0.51 11.84 3.09 0.43 1.64 5.70 7.29 1.22 0.00 0.99 0.00 0.00 1.57 4 225282 Transcript 0 1.18 0.90 0.27 0.00 0.00 2.14 0.15 0.38 0.00 0.38 0.21 0.00 0.00 0.54 0.00 1.49 0.00 0.00 0.00 0.24 0.49 0.00 0.00 5 465370 Transcript 0 1.87 2.32 13.22 12.01 14.94 16.42 17.28 40.07 37.49 16.44 1.34 2.45 6.47 1.01 3.40 6.18 1.12 4.85 2.39 6.76 9.37 2.46 4.94 6 ER1a ExonRegion 0 5.21 24.01 12.96 4.11 27.22 73.67 55.25 32.94 23.40 27.77 12.34 3.33 0.00 18.77 23.82 71.62 42.47 41.36 9.49 36.50 18.10 13.18 28.07 7 E1a_E3a KnownJunction 1 105.94 155.63 78.50 32.80 460.02 823.28 573.54 244.92 170.63 227.60 180.10 43.36 6.01 210.49 194.45 906.00 616.08 232.18 125.09 306.16 283.74 86.83 255.66 8 ER1b ExonRegion 1 53.93 104.39 56.19 19.08 237.35 486.64 349.43 154.34 105.53 148.33 116.69 14.27 0.69 134.80 112.72 561.18 389.26 170.75 76.33 214.50 172.46 61.43 175.65 9 ER2a ExonRegion 0 0.24 1.81 0.54 0.00 0.00 1.22 0.29 0.77 0.00 0.76 0.43 0.00 0.00 1.08 0.00 2.97 0.00 0.00 0.00 0.47 0.98 0.00 0.00 10 ER3a ExonRegion 0 32.78 50.51 52.62 26.50 195.98 303.66 178.23 187.24 131.31 129.17 60.23 55.07 33.87 69.06 43.82 329.15 233.56 124.36 41.04 114.52 123.77 32.32 81.51 11 E3a_E4a KnownJunction 1 17.26 13.02 44.74 21.48 28.01 48.15 30.87 92.01 72.08 76.53 27.38 143.00 136.52 35.79 15.08 72.63 72.09 30.05 14.40 49.15 71.97 28.23 8.62 12 ER4a ExonRegion 0 6.01 7.59 91.83 44.74 27.64 30.53 26.12 280.58 198.37 217.88 116.15 164.04 104.78 154.05 102.70 311.60 427.33 124.15 55.74 240.28 194.12 75.72 87.86 13 E4a_E5a KnownJunction 1 3.41 37.23 121.85 65.59 59.25 34.98 47.17 383.06 243.26 240.82 76.97 221.02 101.13 295.60 208.54 918.82 307.34 195.99 129.32 259.82 158.27 149.72 252.93 14 ER5a ExonRegion 1 7.09 29.79 98.31 67.74 79.14 46.21 47.13 353.77 239.12 217.94 86.79 253.92 168.49 211.05 132.08 798.02 325.96 198.31 114.12 186.01 150.68 113.71 180.75 15 E5_Da KnownBoundary 0 0.00 2.83 6.36 8.36 20.46 0.00 8.61 6.00 5.58 2.39 0.00 7.65 20.94 0.00 0.00 12.56 4.58 0.00 0.00 2.75 0.00 0.00 0.00 16 E5a_E6a KnownJunction 0 16.30 21.77 62.39 56.74 127.84 76.66 61.25 290.06 174.27 168.40 112.03 238.88 229.69 173.82 99.76 574.21 358.86 128.80 109.18 151.61 150.61 84.62 107.81 17 ER5b ExonRegion 0 2.80 1.74 2.25 5.42 6.21 0.97 4.62 5.98 4.19 1.19 0.51 11.84 3.09 0.43 1.64 5.70 7.29 1.22 0.00 0.99 0.00 0.00 1.57 18 ER6a ExonRegion 0 23.31 93.14 106.20 97.43 216.53 338.89 222.43 347.68 237.83 226.69 124.72 363.42 209.76 244.33 113.46 351.58 479.76 136.00 68.25 200.93 190.76 98.79 102.29 19 E6a_E7a KnownJunction 1 39.19 163.92 83.26 126.89 59.25 66.27 107.58 370.94 244.21 261.74 140.25 407.98 224.34 281.12 103.10 393.06 495.00 118.64 94.50 173.28 207.20 124.00 77.00 20 ER7a ExonRegion 0 37.55 148.41 113.66 115.01 100.41 77.14 111.42 296.65 198.81 217.42 106.83 464.38 243.01 239.06 109.07 342.57 366.15 126.01 58.69 172.04 175.40 108.56 84.18 21 E7a_E8a KnownJunction 1 32.60 169.05 108.72 95.29 157.22 170.64 139.64 301.52 164.55 213.23 68.02 525.77 198.69 229.33 149.70 368.88 279.57 143.64 58.73 218.66 148.76 74.77 92.96 22 ER8a ExonRegion 1 26.60 127.69 129.32 136.61 207.83 170.04 164.71 379.53 232.01 263.06 84.31 493.10 251.78 223.51 145.67 443.28 335.30 132.84 79.68 212.74 134.22 117.58 98.65 23 E8a_E9a KnownJunction 0 40.90 195.82 193.19 185.62 288.29 155.93 234.28 473.46 289.81 311.49 88.86 516.02 234.24 231.86 196.43 580.36 339.13 100.57 91.01 256.50 118.80 134.16 140.25 24 ER9a ExonRegion 1 42.90 171.46 123.14 113.77 254.14 183.11 179.44 382.01 238.63 222.07 87.69 551.84 220.94 207.04 122.84 405.30 376.39 113.32 79.78 187.67 128.34 122.01 104.93 25 E9a_E10a KnownJunction 0 58.83 220.03 116.88 122.00 222.67 253.83 175.50 427.91 250.37 227.63 110.13 452.40 186.03 207.25 123.49 482.69 394.02 184.38 123.20 225.44 175.20 140.59 131.80 26 I9_SR2 SilentIntronRegion 0 20.65 7.70 19.80 10.47 24.02 4.43 13.63 39.74 8.99 8.88 0.78 20.61 13.73 0.60 5.71 18.71 17.24 3.25 3.91 5.31 1.65 0.62 2.81 27 I9_AR10 ActiveIntronRegion 1 0.49 0.00 10.37 10.79 28.85 4.88 11.72 42.12 7.44 2.92 0.45 37.22 27.45 0.00 5.59 9.97 9.22 1.26 0.82 5.60 0.00 0.71 0.04 28 ER10a ExonRegion 0 24.67 124.80 115.20 99.90 232.20 174.11 176.54 355.72 213.72 211.10 111.78 377.83 164.83 238.61 124.25 428.92 396.29 200.10 105.59 209.33 212.56 111.03 115.16 29 E10a_E11a KnownJunction 0 31.56 155.76 116.35 87.33 170.88 198.24 172.59 382.07 226.56 239.72 113.87 239.33 115.09 225.32 138.58 435.27 325.85 253.74 112.00 220.77 211.03 106.91 127.53 30 I10_AR1 ActiveIntronRegion 0 7.64 2.18 14.12 22.91 17.06 5.55 24.16 28.15 9.26 6.97 1.65 31.50 29.08 2.98 3.73 18.19 37.40 4.63 3.32 14.70 4.17 3.41 6.39 31 ER11a ExonRegion 0 32.97 65.88 131.81 106.58 202.94 204.90 170.28 328.10 219.39 222.02 114.73 285.74 112.84 242.23 151.11 421.58 363.30 247.81 84.60 225.35 230.27 119.44 125.53 32 E11a_E12a KnownJunction 0 67.94 90.12 151.56 92.50 215.53 291.88 226.38 330.60 216.17 235.63 115.40 357.42 146.74 286.36 154.15 496.11 363.53 213.48 145.79 237.64 221.78 124.92 149.81 33 ER12a ExonRegion 0 30.59 64.32 121.75 101.31 246.24 225.61 203.15 325.23 208.82 210.80 99.22 323.38 117.88 261.33 154.39 408.13 327.89 173.81 97.34 213.87 195.63 120.62 128.23 34 E12a_E13a KnownJunction 0 19.63 71.57 118.00 120.30 180.31 191.03 208.49 368.35 224.42 229.78 89.34 194.01 65.09 206.31 157.61 351.79 352.41 163.53 105.98 211.63 157.53 125.77 100.47 35 ER13a ExonRegion 0 29.15 61.45 127.05 103.49 226.16 170.54 152.34 345.33 231.16 222.62 93.34 263.87 75.71 253.66 152.76 440.49 349.28 210.69 116.66 194.74 189.24 125.57 139.21 36 E13a_E14a KnownJunction 0 46.75 79.20 137.22 81.34 152.89 185.18 150.99 334.55 236.20 226.12 100.03 237.08 147.23 250.93 149.70 462.19 331.65 194.21 177.61 197.95 185.70 125.90 137.26 37 ER14a ExonRegion 0 42.04 67.47 126.17 90.49 199.76 213.45 196.11 320.72 261.47 226.41 103.11 336.21 100.69 256.53 201.55 420.31 337.28 222.17 162.49 236.48 217.89 129.85 153.71 38 E14a_E15a KnownJunction 0 42.01 61.04 101.98 85.54 142.87 226.46 264.00 237.28 223.23 249.41 72.49 278.64 71.59 261.58 191.48 304.96 199.16 164.36 76.24 227.10 267.13 100.36 100.98 39 ER15a ExonRegion 0 41.28 81.67 113.73 94.37 174.76 195.78 206.28 256.80 248.90 229.00 98.25 303.53 123.73 222.42 191.17 310.37 240.90 215.25 123.56 226.56 221.13 130.08 112.13 40 E15a_E16a KnownJunction 0 59.86 79.66 137.19 109.54 175.55 154.06 180.10 310.36 287.09 244.23 104.61 411.43 128.40 201.60 280.49 362.64 242.92 193.84 137.89 224.09 185.89 103.67 152.71 41 ER16a ExonRegion 0 40.07 71.84 145.05 126.92 187.84 178.17 200.32 352.30 302.06 287.05 107.92 324.23 167.34 280.28 223.81 300.32 284.64 189.23 132.24 240.23 224.99 144.10 104.80 42 E16a_E17a KnownJunction 0 84.39 107.88 183.35 157.16 240.24 258.09 345.79 379.52 297.68 259.57 100.55 320.50 248.20 233.86 228.82 306.07 270.22 197.40 123.30 238.60 191.32 183.70 101.16 43 E17_Ab NovelBoundary 0 26.45 48.48 91.57 74.15 76.66 127.48 104.84 159.04 133.30 118.43 27.11 79.83 81.81 60.86 60.82 123.64 113.23 90.74 39.53 80.54 48.50 72.19 53.18 44 ER17a ExonRegion 0 56.62 102.44 182.73 150.26 211.72 240.00 278.69 356.71 298.74 275.83 95.20 292.24 228.05 219.46 216.87 285.70 285.11 199.10 98.75 212.77 188.97 175.02 108.29 45 ER17b ExonRegion 0 66.47 96.47 172.76 144.03 191.57 248.12 223.57 344.99 312.30 293.55 121.22 346.72 145.15 226.41 238.94 298.67 261.95 198.99 128.66 211.54 208.64 122.29 112.59 46 E17a_E18a KnownJunction 0 96.17 107.48 155.11 148.53 212.99 231.68 279.28 382.77 336.86 322.21 132.72 389.68 144.96 264.23 327.34 334.10 268.82 204.41 187.86 244.61 248.47 120.32 139.23 47 ER18a ExonRegion 0 69.05 86.20 148.33 130.26 156.50 212.03 221.73 352.09 297.08 303.46 104.09 312.59 226.00 291.47 240.44 283.24 262.59 141.61 106.99 211.67 212.80 141.29 108.33 48 E18a_E19a KnownJunction 0 81.57 118.40 169.10 138.51 231.24 173.03 270.41 302.02 267.33 308.97 92.02 322.15 214.43 311.32 186.79 324.96 285.65 154.91 108.05 245.25 234.94 143.29 124.12 49 I18_AR4 ActiveIntronRegion 0 22.46 6.85 4.92 7.86 19.85 3.40 20.30 13.03 12.08 9.21 1.63 17.75 6.15 3.64 6.26 3.00 5.00 1.40 3.76 6.81 3.33 7.72 3.95 50 E19_Aa NovelBoundary 0 44.38 16.64 7.48 10.65 46.77 30.15 41.82 32.04 8.97 20.79 4.84 12.45 13.64 4.77 13.35 0.00 13.74 2.07 3.67 16.81 12.23 5.88 0.00 51 ER19a ExonRegion 0 77.72 115.15 149.90 151.34 215.90 211.14 206.11 336.02 274.09 294.51 100.04 268.20 195.00 261.54 219.21 310.77 208.69 224.10 131.66 182.60 209.52 117.56 136.65 52 E19a_E20a KnownJunction 0 136.54 120.57 173.89 122.10 301.61 301.93 269.83 363.34 295.43 322.80 105.18 201.82 170.93 338.63 210.40 290.61 276.11 251.91 128.00 220.96 233.02 142.06 129.15 53 ER20a ExonRegion 0 70.40 117.54 134.20 132.53 223.26 215.20 204.55 325.60 278.18 285.84 104.48 178.34 121.53 245.28 209.53 279.30 231.58 201.68 101.21 221.69 190.43 118.07 111.00 54 E20a_E21a KnownJunction 0 78.01 160.56 178.47 154.79 275.04 223.22 209.20 425.94 299.16 343.67 83.55 270.69 130.84 248.16 231.78 370.50 210.94 190.69 140.80 266.98 134.37 137.59 125.91 55 E21_Aa NovelBoundary 0 34.15 3.35 14.78 11.85 15.03 8.12 10.25 29.20 4.25 14.94 0.00 11.25 0.00 2.47 0.00 9.91 13.00 7.71 4.42 2.75 2.41 2.69 4.35 56 ER21a ExonRegion 0 119.89 153.64 168.99 150.96 304.89 241.21 227.98 406.90 342.17 337.19 112.18 218.48 141.37 271.55 280.80 364.46 245.98 214.40 149.60 235.30 153.63 159.17 146.31 57 E21a_E22a KnownJunction 0 0.00 0.00 6.09 4.76 0.00 5.17 2.12 38.12 24.62 14.48 0.00 0.00 0.00 0.00 4.45 3.76 0.00 4.35 4.80 5.56 2.53 0.00 0.00 58 E21a_E23a KnownJunction 0 116.61 173.32 155.49 155.59 440.24 302.21 318.46 323.66 315.25 299.91 140.51 256.28 91.55 298.37 344.52 381.01 241.61 165.48 142.12 277.34 172.67 169.31 150.50 59 ER22a ExonRegion 0 5.62 6.96 14.42 12.32 30.30 15.47 24.01 45.17 40.33 19.62 1.97 1.49 12.60 3.03 5.74 11.62 3.37 4.18 2.38 12.29 10.75 4.88 11.75 60 E22a_E23a KnownJunction 0 0.00 0.00 19.16 18.95 14.52 28.62 25.70 36.93 47.51 15.20 2.05 5.85 6.82 0.00 0.00 3.16 0.00 6.01 0.00 2.43 14.83 2.51 3.07 61 E23_Aa NovelBoundary 0 92.91 14.93 7.16 10.35 54.92 23.23 46.06 10.06 9.75 4.81 0.00 12.75 6.33 2.35 4.82 17.86 14.49 7.79 0.00 4.92 0.00 10.59 0.00 62 ER23a ExonRegion 0 106.24 168.62 179.28 173.88 403.29 276.90 311.17 342.43 338.94 316.45 117.16 239.44 151.51 244.52 241.85 309.18 263.15 173.28 126.09 230.61 150.65 147.70 131.17 63 E23_Da KnownBoundary 0 166.99 190.16 210.52 207.03 447.88 325.95 372.03 354.39 347.91 310.85 113.24 261.84 175.31 211.49 247.61 282.40 291.44 159.47 162.45 260.97 131.46 142.92 132.31 64 ER23b ExonRegion 0 145.53 159.70 284.62 218.41 315.42 215.81 255.88 472.55 311.07 334.95 75.96 233.21 108.83 163.68 335.30 223.04 163.20 113.09 105.59 212.75 87.00 182.79 81.22 65 ER23c ExonRegion 0 2.12 0.00 0.00 0.00 0.00 3.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00