Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 COASY Gene 0 101.44 48.06 273.30 135.88 60.67 139.98 73.16 165.02 83.17 336.65 268.55 79.75 61.89 264.76 304.40 225.15 185.43 128.82 151.45 148.47 151.70 99.81 125.72 2 421097 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 393818 Transcript 1 50.58 13.40 127.28 64.95 11.58 41.70 21.42 103.56 37.44 262.37 279.34 37.61 33.45 87.03 149.93 132.27 214.99 126.82 186.68 105.59 155.82 61.85 106.02 4 412030 Transcript 1 6.52 9.14 20.43 12.69 47.03 161.10 47.08 63.75 48.12 50.50 66.39 0.00 0.00 30.14 19.66 35.29 52.27 14.84 22.78 18.47 18.04 3.12 4.01 5 420359 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 449624 Transcript 0 3.19 0.00 5.38 18.98 0.00 2.90 8.39 16.22 1.53 6.04 14.16 0.00 0.00 9.77 0.00 50.41 13.00 11.40 21.74 8.63 0.00 2.39 0.00 7 393816 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 426807 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 IG34_SR3 SilentIntergenicRegion 0 7.13 14.85 13.33 12.55 18.34 21.43 17.70 20.25 8.48 11.33 0.87 6.81 8.15 3.39 5.04 5.34 1.48 4.03 5.01 9.80 4.46 1.40 2.64 10 IG34_AR4 ActiveIntergenicRegion 0 7.80 20.04 8.46 6.43 2.68 19.69 14.88 9.62 3.95 16.15 1.04 0.00 4.15 7.21 5.74 0.00 1.77 8.56 3.08 18.01 0.00 0.00 0.00 11 IG34_AR5 ActiveIntergenicRegion 0 4.73 17.29 2.45 0.91 5.99 43.48 27.25 5.76 3.29 6.12 4.32 0.00 0.00 4.74 6.41 5.32 2.95 2.46 5.70 13.33 6.90 0.00 2.63 12 ER1a ExonRegion 1 74.47 28.97 46.60 34.87 46.35 153.55 66.73 57.07 28.93 112.07 180.85 5.87 4.47 95.49 237.33 244.83 142.19 86.59 197.82 88.15 88.16 69.40 199.57 13 E1_Da KnownBoundary 1 326.87 89.26 224.45 139.64 110.95 279.27 157.35 187.46 76.68 455.34 455.17 30.16 46.43 200.54 429.32 492.86 355.49 383.03 839.74 294.34 220.11 169.00 499.63 14 E1a_E1b KnownJunction 0 3.78 0.00 3.28 0.00 0.00 0.00 1.68 0.00 1.56 2.90 30.01 5.40 0.00 16.83 4.45 24.61 9.44 11.07 0.00 2.62 0.00 0.00 0.00 15 E1a_E1d KnownJunction 1 6.52 9.14 20.43 12.69 47.03 161.10 47.08 63.75 48.12 50.50 66.39 0.00 0.00 30.14 19.66 35.29 52.27 14.84 22.78 18.47 18.04 3.12 4.01 16 E1a_E1g KnownJunction 1 3.19 0.00 5.38 18.98 0.00 2.90 8.39 16.22 1.53 6.04 14.16 0.00 0.00 9.77 0.00 50.41 13.00 11.40 21.74 8.63 0.00 2.39 0.00 17 ER1b ExonRegion 0 50.58 13.40 127.28 64.95 11.58 41.70 21.42 103.56 37.44 262.37 279.34 37.61 33.45 87.03 149.93 132.27 214.99 126.82 186.68 105.59 155.82 61.85 106.02 18 E1_Ab KnownBoundary 1 33.64 9.34 216.11 122.00 3.57 16.13 13.91 151.65 62.21 508.98 532.45 31.36 57.63 276.95 397.92 357.43 420.57 136.17 358.13 228.06 245.38 234.95 269.32 19 ER1c ExonRegion 0 25.17 8.64 184.83 108.37 4.16 22.73 9.05 123.15 53.42 376.45 238.02 56.67 53.27 293.01 610.04 405.38 190.98 106.34 340.66 190.12 129.23 177.84 350.93 20 E1_Ac KnownBoundary 1 40.60 9.01 176.43 101.49 4.24 53.09 13.73 107.66 58.85 268.73 152.35 60.92 70.45 195.48 361.58 329.91 96.31 184.55 315.02 187.21 119.79 69.50 263.94 21 ER1d ExonRegion 0 19.16 14.99 155.61 74.72 74.49 135.75 55.39 90.23 36.95 234.49 160.35 67.83 50.21 165.36 263.16 169.45 79.79 95.00 121.43 129.53 118.71 58.03 105.37 22 E1_Db KnownBoundary 0 21.78 23.81 153.28 71.22 259.42 377.11 187.65 81.41 24.13 242.86 167.99 36.16 46.10 178.41 279.99 145.26 136.98 77.81 91.20 140.30 117.32 61.97 58.39 23 E1b_E1d KnownJunction 0 0.00 0.00 9.40 0.00 11.97 0.00 2.03 0.00 1.24 8.73 19.53 0.00 0.00 4.83 4.45 3.93 0.00 5.89 0.00 6.01 8.53 0.00 0.00 24 E1b_E1g NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER1e ExonRegion 0 34.07 53.78 140.44 60.21 49.47 166.32 83.97 66.18 34.88 219.65 179.20 68.41 68.89 221.11 240.29 100.70 100.90 82.82 72.68 115.13 143.59 62.41 69.38 26 E1_Ad KnownBoundary 0 43.56 28.94 99.29 37.56 15.03 114.25 39.13 49.62 15.36 98.21 110.40 62.87 41.07 107.66 112.86 75.71 69.66 62.35 8.47 78.04 95.38 47.88 40.80 27 E1_Ae KnownBoundary 0 29.71 15.72 107.95 53.54 15.37 44.07 22.96 89.75 34.40 227.47 121.19 46.97 49.51 100.18 164.04 90.23 98.55 76.07 35.48 79.00 80.93 45.74 65.56 28 ER1f ExonRegion 0 47.14 31.98 162.53 73.97 42.33 206.22 74.02 135.13 64.56 290.38 237.40 81.87 99.77 233.28 276.94 126.18 158.74 100.45 49.81 128.63 158.67 72.35 69.14 29 ER1g ExonRegion 0 61.59 22.71 216.04 92.17 31.40 68.44 34.79 153.96 76.75 340.72 278.99 107.91 120.86 308.81 349.12 215.32 189.38 140.42 130.07 133.27 171.92 92.41 119.32 30 E1_Dc KnownBoundary 0 34.60 24.86 287.31 151.10 64.52 105.73 42.66 178.88 95.46 358.93 176.31 85.98 68.34 240.16 212.50 203.37 144.09 127.39 95.44 114.03 149.93 83.95 113.70 31 E1c_E1f KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER1h ExonRegion 0 77.14 34.06 358.25 169.30 57.08 202.38 75.32 247.60 114.16 483.07 325.45 119.78 166.95 367.10 319.66 336.39 240.69 206.64 213.86 178.28 201.03 120.21 171.14 33 E1_Af KnownBoundary 0 143.06 59.59 402.26 176.90 91.68 363.03 113.59 334.67 142.24 553.36 424.42 161.90 295.11 505.21 468.39 433.13 297.52 274.84 393.23 200.38 224.07 174.21 216.99 34 E1_Ag KnownBoundary 0 96.83 96.56 281.86 132.45 54.50 287.45 136.55 174.77 99.13 356.89 446.38 138.50 243.00 499.86 686.08 429.37 290.79 166.64 327.26 125.15 237.72 147.14 244.65 35 ER1i ExonRegion 0 102.03 78.54 411.77 171.21 57.76 324.46 119.38 299.50 150.85 571.55 491.76 166.46 271.05 534.78 572.75 469.49 315.29 273.98 382.68 161.55 267.26 182.85 267.54 36 ER1j ExonRegion 0 57.81 42.78 330.12 151.09 50.26 112.91 72.87 176.17 106.06 395.30 289.22 105.87 113.45 302.42 293.86 227.66 214.04 137.45 147.92 169.72 174.59 103.47 105.94 37 E1_Dd KnownBoundary 0 25.56 24.93 383.90 187.22 30.05 109.48 52.73 179.58 103.24 394.68 85.39 47.57 41.88 123.02 189.01 140.48 173.63 33.70 57.98 158.45 31.63 77.22 76.91 38 ER1k ExonRegion 0 68.94 57.11 339.59 162.36 65.09 145.30 83.52 189.78 86.91 366.27 279.40 99.31 74.85 309.49 267.27 230.07 203.31 138.41 127.28 155.60 153.23 102.84 108.66 39 E1_De NovelBoundary 0 60.08 9.54 42.07 42.25 26.23 31.12 20.84 37.30 12.93 58.13 29.74 18.31 28.57 64.04 33.38 88.69 36.19 41.37 55.63 20.07 20.63 42.07 11.35 40 E1e_E2a KnownJunction 0 111.50 99.39 336.33 201.24 70.54 165.76 94.95 236.79 95.46 414.05 320.92 123.64 82.30 370.83 389.02 328.80 163.07 164.36 268.53 221.22 164.57 160.98 156.04 41 I1 Intron 0 53.49 12.53 39.63 31.20 23.66 26.21 17.50 30.14 9.37 36.18 47.31 26.30 23.01 45.26 37.51 45.66 23.00 22.72 27.31 17.29 20.46 12.84 12.07 42 I1_AR1 ActiveIntronRegion 0 53.68 12.58 39.77 31.31 23.74 26.30 17.56 30.24 9.40 36.30 47.48 26.39 23.10 45.41 37.64 45.82 23.08 22.80 27.39 17.35 20.53 12.89 12.11 43 E2_Aa NovelBoundary 0 72.53 3.16 55.41 35.86 36.16 41.34 23.32 37.38 2.66 27.83 41.43 6.90 21.91 72.34 18.54 17.35 26.93 12.52 28.24 12.72 11.43 20.21 16.73 44 ER2a ExonRegion 0 110.04 59.42 335.26 185.68 61.16 170.64 94.63 220.90 112.39 435.20 323.50 106.89 67.75 369.08 303.74 273.08 232.11 160.88 172.56 182.89 165.07 124.51 167.91 45 E2_Da NovelBoundary 0 77.35 25.72 20.76 27.27 44.74 10.68 47.30 30.23 18.98 40.94 31.90 19.21 34.25 54.74 53.77 22.64 26.18 11.81 19.29 26.40 33.36 3.12 14.85 46 E2a_E3a KnownJunction 0 93.65 51.24 228.82 154.16 60.87 173.88 84.57 193.62 81.19 354.66 227.53 105.18 40.74 244.22 253.42 219.00 189.34 126.18 120.85 176.22 139.43 95.10 130.78 47 I2 Intron 0 69.96 11.14 20.35 16.11 23.25 28.06 30.76 26.27 9.39 27.76 34.68 7.60 5.99 47.14 31.98 38.18 21.20 13.71 19.25 20.50 19.97 18.89 16.64 48 I2_AR1 ActiveIntronRegion 0 70.48 11.22 20.50 16.22 23.41 28.25 30.99 26.46 9.46 27.97 34.94 7.66 6.04 47.48 32.18 38.45 21.34 13.82 19.39 20.63 20.12 19.03 16.77 49 E3_Aa NovelBoundary 0 115.58 12.17 52.66 54.27 45.25 27.14 62.67 46.33 15.77 43.76 63.33 0.00 12.66 83.05 56.49 67.67 31.04 29.18 48.38 51.45 26.13 25.04 33.04 50 ER3a ExonRegion 0 129.03 62.01 266.61 147.39 102.06 234.93 109.13 184.74 93.40 394.54 301.31 100.14 53.40 335.48 301.91 260.92 249.37 134.03 149.33 163.49 166.16 123.56 135.15 51 E3_Da NovelBoundary 0 28.82 0.00 24.72 20.14 24.19 13.63 32.15 40.09 9.90 18.24 27.64 0.00 0.00 14.24 19.53 33.32 13.00 22.76 12.14 26.91 17.24 5.45 16.22 52 E3a_E4a KnownJunction 0 138.62 77.88 249.46 129.65 96.43 206.53 53.83 102.44 61.34 339.51 256.01 56.72 46.43 281.83 223.13 224.81 179.80 98.91 91.77 117.80 117.32 141.63 99.53 53 E3a_E5a NovelJunction 1 13.34 15.46 12.27 2.93 26.23 2.67 18.37 3.61 13.14 8.30 9.42 0.00 0.00 10.07 15.08 36.74 0.00 2.11 3.95 11.25 9.08 0.00 0.00 54 E3a_E6a NovelJunction 0 6.67 6.25 11.74 24.01 15.87 24.30 34.27 25.42 6.11 12.01 16.90 20.56 0.00 11.54 24.23 24.69 7.57 10.94 12.33 0.00 6.18 0.00 0.00 55 I3 Intron 0 15.66 1.58 7.82 8.70 8.33 9.28 18.04 14.04 4.30 9.98 9.03 1.39 0.00 22.61 16.88 19.67 20.56 5.01 8.68 9.94 6.86 7.30 4.57 56 I3_AR1 ActiveIntronRegion 0 15.90 1.61 7.94 8.81 8.44 9.42 18.32 14.26 4.37 10.12 9.17 1.41 0.00 22.96 17.14 19.98 20.88 5.08 8.82 10.09 6.97 7.41 4.64 57 E4_Aa NovelBoundary 0 42.01 6.71 17.15 11.59 37.78 13.17 26.19 44.28 17.36 24.52 20.95 6.30 0.00 28.19 30.16 12.39 13.37 12.85 32.38 21.35 9.08 6.00 0.00 58 ER4a ExonRegion 0 200.45 65.42 293.82 158.01 84.85 147.62 83.80 139.08 84.90 348.81 247.66 78.80 39.59 308.86 291.65 244.61 175.73 117.29 153.65 145.59 167.99 108.44 127.84 59 E4_Da NovelBoundary 0 33.86 6.25 35.45 12.95 3.65 12.55 43.24 47.24 15.08 41.02 10.58 0.00 0.00 26.78 18.91 31.62 24.96 15.38 12.14 14.38 2.53 5.57 14.17 60 E4a_E5a KnownJunction 0 156.84 70.91 311.22 184.96 72.24 216.07 88.55 156.49 69.76 306.41 310.50 40.06 40.74 262.47 290.25 275.40 168.58 124.48 171.02 132.44 200.96 118.24 128.98 61 E5_Aa NovelBoundary 0 65.27 6.18 43.11 34.19 29.97 31.35 20.05 51.67 22.48 53.43 28.17 6.30 0.00 23.96 49.08 20.08 12.53 19.11 9.51 14.38 12.11 10.16 4.35 62 ER5a ExonRegion 1 230.02 96.83 401.34 224.04 149.97 299.02 158.53 212.36 94.70 409.41 325.86 136.81 47.12 362.28 381.31 286.79 201.41 154.05 221.80 181.28 200.81 148.76 141.68 63 E5_Da NovelBoundary 0 44.60 0.00 19.75 13.58 31.24 10.39 31.66 39.88 7.90 21.73 23.69 0.00 0.00 4.36 19.28 24.01 9.54 9.53 18.07 8.82 8.83 4.96 11.10 64 E5a_E6a KnownJunction 1 354.06 157.67 512.22 298.43 251.53 455.99 212.16 266.94 127.31 531.54 374.41 174.21 25.00 386.78 553.81 424.59 272.74 183.43 344.67 230.74 207.88 171.21 212.72 65 I5 Intron 0 22.31 3.48 15.61 12.73 6.86 9.40 6.79 16.15 3.15 14.61 13.77 4.06 3.30 8.79 10.75 7.62 3.76 7.59 4.54 3.03 6.91 1.19 6.69 66 I5_SR1 SilentIntronRegion 0 22.69 3.54 15.86 12.94 6.98 9.53 6.91 16.42 3.20 14.86 14.00 4.13 3.36 8.94 10.93 7.75 3.83 7.72 4.62 3.08 7.02 1.21 6.81 67 E6_Aa NovelBoundary 0 47.79 8.62 26.14 24.64 12.05 17.49 9.76 31.01 4.46 30.38 14.37 0.00 19.32 18.19 13.35 23.33 4.21 11.44 11.95 3.26 5.81 5.51 3.59 68 ER6a ExonRegion 1 221.39 107.44 419.74 227.10 147.04 260.77 141.59 222.38 129.03 412.12 347.15 122.29 39.18 343.47 405.19 297.28 215.80 194.17 165.04 198.27 200.33 110.23 147.90 69 E6a_E7a KnownJunction 1 297.76 88.34 503.86 248.25 170.37 211.53 140.92 224.63 134.46 389.42 353.77 55.52 21.26 270.76 352.56 260.44 168.02 192.22 188.81 215.08 152.16 83.34 124.03 70 ER7a ExonRegion 1 174.83 72.59 484.11 240.37 74.65 151.70 98.97 235.44 116.71 451.81 366.60 111.99 24.26 303.35 362.57 285.69 195.12 173.12 201.65 194.75 177.08 121.99 122.02 71 E7_Da NovelBoundary 1 96.17 11.77 18.78 21.38 15.03 4.94 0.00 21.07 11.49 41.64 15.85 18.76 13.31 28.67 46.48 84.25 12.34 22.38 28.89 8.88 11.24 4.78 8.28 72 E7a_E8a KnownJunction 1 215.67 100.11 502.94 242.96 64.52 194.89 102.02 240.78 140.77 461.92 346.77 95.73 20.29 318.80 399.78 332.14 229.55 160.96 203.39 234.45 162.29 116.96 158.52 73 ER8a ExonRegion 1 159.21 66.76 434.34 200.91 67.55 167.44 94.25 237.97 111.71 399.98 282.53 63.29 25.62 256.95 373.43 222.59 182.02 153.97 139.25 177.15 124.02 106.80 103.26 74 E8a_E9a KnownJunction 0 153.51 122.94 443.54 194.65 122.24 210.62 132.18 263.98 112.79 422.19 338.51 55.22 32.14 244.22 394.46 285.57 204.11 156.03 81.04 229.27 101.62 115.85 137.43 75 ER9a ExonRegion 0 96.18 39.74 226.91 109.05 50.05 88.09 43.34 156.45 71.88 237.71 212.72 34.13 24.76 172.56 272.04 150.82 136.45 75.61 82.63 117.02 103.69 79.85 72.30 76 ER9b ExonRegion 0 1.41 4.75 6.13 1.36 2.68 3.06 4.85 1.15 0.82 0.38 4.51 0.00 1.56 4.33 17.41 2.97 3.30 2.46 6.37 4.96 0.00 0.00 0.00