Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CDC27 Gene 0 122.82 176.29 157.02 162.57 213.54 225.94 258.03 181.34 129.68 251.33 282.71 398.39 341.88 282.65 152.52 223.02 244.40 79.75 63.38 185.32 114.14 228.71 126.48 2 441612 Transcript 1 8.83 23.44 28.86 20.54 35.87 24.95 32.09 33.38 24.41 59.56 91.66 82.06 38.96 67.67 10.55 50.01 103.49 17.23 43.64 62.45 43.44 60.57 37.71 3 66544 Transcript 1 93.57 155.17 88.05 147.60 117.32 159.40 198.60 209.56 166.87 310.93 720.81 551.58 546.39 482.43 143.40 361.02 654.51 166.93 68.33 264.81 432.94 249.71 196.16 4 446365 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 1 54.36 52.17 31.72 24.51 83.63 179.88 145.42 38.90 43.92 96.15 151.36 25.47 24.88 142.79 52.17 255.54 158.74 166.03 55.85 116.43 168.44 73.44 164.60 6 E1a_E2a KnownJunction 0 3.19 20.98 44.82 20.71 10.70 18.74 25.39 39.84 51.85 164.88 153.46 83.43 99.67 53.27 47.96 66.22 124.26 93.89 4.71 82.90 156.17 30.80 48.40 7 ER2a ExonRegion 1 11.08 27.00 36.29 24.87 27.85 19.06 35.56 64.98 61.43 145.69 334.11 66.08 58.63 210.22 54.40 125.96 314.58 87.31 38.85 176.32 304.11 94.01 83.19 8 E2a_E3a KnownJunction 1 35.27 29.86 51.45 45.42 46.86 30.15 41.60 105.48 74.91 169.71 309.97 71.27 49.83 392.84 69.60 333.93 325.29 165.36 93.84 289.80 222.89 218.66 177.81 9 E2a_E4a NovelJunction 0 3.78 6.25 1.77 2.06 0.00 5.68 1.72 11.54 11.34 13.16 17.16 0.00 0.00 23.78 28.80 28.45 17.20 7.13 4.42 17.64 3.09 16.35 7.68 10 E2a_E5a NovelJunction 0 0.00 0.00 0.00 2.06 0.00 7.27 2.25 4.15 8.01 7.31 4.58 0.00 0.00 15.60 0.00 4.36 16.92 5.89 3.95 6.52 10.81 3.12 12.29 11 ER3a ExonRegion 0 34.01 64.59 67.97 67.86 134.66 199.35 174.12 127.60 89.86 176.72 309.41 205.94 214.41 297.63 106.48 393.95 277.43 213.74 72.75 257.55 164.76 198.16 222.73 12 E3a_E4a KnownJunction 0 35.41 105.51 60.23 45.12 85.14 257.64 278.23 137.89 91.29 171.57 324.82 254.18 272.38 323.98 84.43 185.42 291.91 85.60 42.82 279.96 193.92 208.01 83.06 13 E4_Aa NovelBoundary 0 40.08 20.85 49.82 19.58 71.48 21.52 91.59 22.59 13.37 16.44 0.00 11.85 33.11 0.00 18.54 11.62 4.58 7.30 9.04 34.71 3.15 2.45 0.00 14 ER4a ExonRegion 0 50.56 93.79 93.78 104.97 172.03 241.35 262.85 163.90 123.40 213.24 488.90 479.54 499.04 324.62 116.21 305.40 421.05 102.17 69.57 277.73 191.50 319.37 158.86 15 E4a_E5a KnownJunction 0 49.49 57.75 93.76 95.46 101.02 125.10 119.68 184.18 144.53 266.15 395.73 636.96 517.01 358.47 113.11 316.93 376.34 139.53 71.81 238.67 187.93 278.80 221.52 16 I4 Intron 0 63.11 21.26 59.62 34.94 40.43 10.14 51.98 43.97 20.49 28.36 3.52 22.84 28.76 3.50 12.46 23.06 14.47 6.65 10.31 21.82 2.38 2.25 10.50 17 I4_AR1 ActiveIntronRegion 0 6.51 3.98 34.08 18.52 6.84 7.93 25.54 18.59 7.71 14.57 2.94 16.12 14.23 3.57 6.12 5.05 4.00 3.76 10.83 15.91 1.25 0.95 1.66 18 I4_SR1 SilentIntronRegion 0 70.86 23.63 63.17 37.22 45.04 10.46 55.63 47.47 22.25 30.27 3.60 23.78 30.77 3.49 13.33 25.53 15.91 7.05 10.26 22.65 2.53 2.43 11.71 19 I4 Intron 0 37.69 33.07 54.92 33.59 35.59 9.85 45.99 34.97 16.93 21.92 2.49 18.48 22.26 3.27 16.05 15.86 10.69 7.28 8.85 23.49 3.20 3.57 9.73 20 I4_SR1 SilentIntronRegion 0 12.48 48.98 49.38 33.20 19.40 5.41 37.10 17.41 12.21 17.44 0.71 17.81 22.11 2.10 13.78 6.94 3.25 1.81 3.12 26.41 0.54 2.82 2.89 21 I4_AR2 ActiveIntronRegion 0 47.79 41.62 49.32 40.44 27.78 10.44 48.00 31.98 25.01 22.19 2.48 16.07 17.45 4.36 13.99 11.03 9.99 4.89 6.90 27.50 4.39 4.03 12.73 22 I4_SR3 SilentIntronRegion 0 33.83 35.26 54.92 36.73 37.59 7.81 57.08 45.88 17.07 24.55 1.93 27.65 41.80 2.40 16.24 11.37 3.82 3.72 5.42 20.93 1.12 3.70 5.17 23 I4_AR3 ActiveIntronRegion 0 53.96 33.54 45.22 33.75 25.78 8.55 49.86 30.58 8.00 18.14 3.46 24.03 33.76 0.75 11.03 5.78 9.16 2.91 8.17 21.73 2.33 2.93 7.53 24 I4_AR4 ActiveIntronRegion 0 27.25 29.92 37.26 25.86 38.49 8.39 58.02 26.15 10.09 15.60 1.95 17.91 31.05 1.70 10.24 7.76 9.65 4.77 8.21 20.71 1.79 2.99 11.02 25 I4_SR4 SilentIntronRegion 0 51.31 28.29 68.95 36.54 47.67 12.36 45.64 45.39 19.91 26.39 3.59 19.94 19.20 3.79 19.90 25.10 15.39 12.05 13.40 24.16 5.13 4.01 12.58 26 I4_AR5 ActiveIntronRegion 0 26.53 20.36 56.34 29.90 28.88 12.66 21.64 40.81 16.81 24.06 5.54 0.00 3.60 7.57 18.58 29.54 20.89 12.24 5.63 12.30 4.94 4.12 14.93 27 I4 Intron 0 44.47 24.46 41.00 28.02 46.78 9.71 53.72 23.96 8.86 13.16 4.65 22.87 24.69 1.20 12.18 17.16 12.71 11.07 16.86 22.52 4.23 7.35 11.30 28 I4_SR1 SilentIntronRegion 0 71.52 28.97 43.30 25.36 46.96 12.66 59.48 24.55 5.45 14.88 5.12 21.97 30.33 1.39 13.31 17.68 9.38 12.09 17.99 19.68 2.93 7.00 13.01 29 I4_AR1 ActiveIntronRegion 0 25.16 21.33 39.56 30.09 46.87 7.62 49.85 23.65 11.36 11.98 4.34 23.65 20.75 1.06 11.43 16.86 15.18 10.39 16.13 24.70 5.19 7.64 10.12 30 E5_Aa NovelBoundary 0 16.30 6.18 51.36 61.00 22.84 7.44 49.33 43.58 7.99 21.22 0.00 25.96 34.09 4.71 18.54 23.75 63.30 16.62 4.24 32.28 5.50 7.78 15.71 31 ER5a ExonRegion 0 62.20 72.94 104.69 118.45 103.32 106.57 137.19 189.64 181.02 310.39 579.14 777.18 718.53 465.74 151.40 437.72 538.25 127.04 113.96 334.48 227.18 405.97 223.51 32 E5a_E6a KnownJunction 0 63.12 122.74 138.32 157.59 198.73 150.48 225.10 208.00 185.99 309.53 624.90 760.15 872.67 500.62 168.24 388.27 525.67 123.28 111.34 370.21 205.66 467.33 216.14 33 ER6a ExonRegion 0 80.88 117.02 117.03 122.28 149.69 247.48 275.65 162.41 156.69 297.65 480.89 856.48 739.72 400.34 125.84 368.45 440.17 109.90 92.21 258.89 144.24 334.91 189.80 34 E6_Da NovelBoundary 0 17.41 30.92 36.43 37.86 31.58 23.23 82.14 53.15 46.18 40.08 47.06 48.62 67.53 32.20 28.06 30.76 54.42 20.52 18.73 67.18 8.96 38.39 16.13 35 E6a_E7a KnownJunction 1 62.83 167.14 66.44 54.61 110.27 216.07 204.34 134.52 106.83 209.36 331.40 867.28 811.31 327.98 119.54 194.99 248.53 23.84 37.84 122.78 63.51 272.98 90.74 36 I6 Intron 1 21.59 18.77 12.44 12.82 19.49 14.25 41.16 17.52 8.05 11.62 13.14 63.58 97.15 21.39 11.52 11.55 11.22 7.16 4.64 32.04 3.21 13.16 15.69 37 I6_SR1 SilentIntronRegion 0 21.99 19.11 12.68 13.06 19.87 14.53 41.90 17.84 8.20 11.85 13.40 64.82 98.99 21.81 11.69 11.77 11.44 7.27 4.73 32.66 3.27 13.37 15.99 38 E7_Aa NovelBoundary 1 52.45 36.44 64.57 67.52 34.97 8.23 58.12 36.84 51.50 60.82 27.22 101.28 226.12 33.61 26.58 47.08 11.87 19.32 4.80 49.60 8.59 30.00 16.30 39 ER7a ExonRegion 0 76.85 138.26 108.62 109.67 150.03 203.14 231.79 173.42 154.34 291.62 429.62 932.88 896.59 402.16 120.48 304.12 377.22 88.23 61.08 237.12 130.09 321.95 148.80 40 E7a_E8a KnownJunction 1 35.04 120.11 95.56 108.14 177.00 225.78 214.10 151.48 151.24 276.89 397.68 935.40 975.42 535.17 160.58 367.85 335.67 137.58 77.65 197.70 191.76 313.70 159.20 41 I7 Intron 0 16.31 26.23 25.25 30.31 20.04 16.35 53.05 22.11 19.42 29.71 13.42 18.63 26.33 8.90 9.24 15.76 21.66 14.18 10.10 38.73 6.38 13.44 13.64 42 I7_SR1 SilentIntronRegion 0 16.37 26.32 25.33 30.40 20.10 16.40 53.22 22.18 19.48 29.80 13.46 18.69 26.42 8.93 9.26 15.81 21.72 14.23 10.13 38.85 6.40 13.48 13.69 43 E8_Aa NovelBoundary 0 34.23 24.40 47.54 79.04 43.63 30.72 79.98 35.53 39.12 62.19 34.43 75.47 60.55 16.60 14.46 27.43 55.17 35.90 17.98 72.16 22.36 21.55 23.13 44 ER8a ExonRegion 0 120.38 155.86 110.67 157.38 182.79 253.94 281.03 214.28 186.23 343.82 560.79 870.15 893.76 713.75 206.34 602.93 560.29 237.07 138.02 333.89 301.18 483.76 365.83 45 E8a_E9a KnownJunction 1 6.52 21.51 20.64 17.41 37.10 20.27 20.62 32.82 22.68 46.50 72.12 75.47 5.84 57.80 4.45 50.59 82.94 14.43 52.24 57.14 27.61 59.95 35.08 46 E8a_E9b KnownJunction 0 93.57 155.17 88.05 147.60 117.32 159.40 198.60 209.56 166.87 310.93 720.81 551.58 546.39 482.43 143.40 361.02 654.51 166.93 68.33 264.81 432.94 249.71 196.16 47 E8a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 E9_Ab NovelBoundary 0 17.26 33.02 41.19 22.54 29.88 23.74 64.70 16.02 16.35 62.32 59.80 35.86 65.58 20.95 10.38 13.84 84.53 12.97 15.44 66.60 39.91 20.27 29.62 49 ER9a ExonRegion 1 11.14 25.37 37.08 23.67 34.64 29.63 43.55 33.93 26.13 72.62 111.19 88.64 72.08 77.53 16.64 49.43 124.04 20.03 35.04 67.75 59.27 61.19 40.34 50 ER9b ExonRegion 1 92.71 167.97 143.02 169.30 152.23 219.07 240.83 209.68 174.98 332.63 596.97 549.15 641.53 602.94 148.87 463.68 596.46 217.21 106.11 275.30 407.06 312.75 260.29 51 E9_Da NovelBoundary 0 21.11 25.06 58.57 66.03 46.77 29.02 85.94 47.24 29.46 49.94 7.58 31.06 30.19 12.07 9.89 17.86 20.57 22.01 14.59 64.30 30.70 8.27 12.72 52 E9a_E10a KnownJunction 0 277.09 428.74 148.04 199.38 316.04 425.04 366.73 277.33 262.87 434.47 959.08 663.82 901.40 941.97 302.62 1039.04 1039.92 345.39 280.86 401.53 617.03 882.74 664.47 53 I9 Intron 0 11.88 12.95 26.07 33.13 23.18 12.90 46.85 29.21 15.79 35.63 6.35 24.44 25.63 2.71 13.75 17.54 14.11 8.62 9.54 33.84 5.06 15.21 16.14 54 I9_SR1 SilentIntronRegion 0 11.96 13.13 26.72 33.96 23.23 13.11 47.71 29.94 16.18 36.52 6.32 24.91 25.62 2.75 14.09 17.86 14.30 8.84 9.65 34.23 5.14 15.41 16.47 55 E10_Aa NovelBoundary 0 109.72 50.65 48.17 37.66 100.25 68.60 259.99 121.25 50.00 83.51 12.90 38.26 88.31 6.83 20.52 38.88 17.67 21.68 29.93 70.05 8.90 82.79 42.34 56 ER10a ExonRegion 0 127.12 267.70 145.45 171.18 193.30 216.79 237.98 195.11 175.21 296.88 501.05 554.91 687.00 662.67 192.67 568.89 502.83 200.44 154.08 277.25 315.68 466.06 340.18 57 E10a_E11a KnownJunction 0 126.32 259.49 175.30 210.10 201.10 237.65 280.12 203.89 175.17 286.16 437.90 403.03 662.94 435.87 183.82 357.60 390.37 122.45 93.37 263.72 200.53 464.64 187.37 58 ER11a ExonRegion 0 80.43 162.38 144.70 169.69 166.77 216.37 246.52 175.11 157.10 271.67 295.43 528.63 543.39 376.87 150.70 301.28 274.99 79.17 68.45 217.70 101.01 297.58 163.12 59 E11a_E12a KnownJunction 0 67.42 169.38 90.00 120.03 224.53 191.37 178.02 142.44 115.36 234.29 237.59 339.26 420.59 227.38 90.86 248.40 260.21 64.96 49.51 123.10 92.17 211.32 122.33 60 ER12a ExonRegion 0 101.95 211.36 100.61 129.35 175.35 203.67 249.70 143.57 111.13 230.12 369.76 514.18 428.28 276.44 126.01 219.18 348.94 65.01 54.19 182.82 121.13 203.27 117.30 61 E12a_E13a KnownJunction 0 79.50 97.48 113.63 146.63 104.33 90.46 130.41 181.88 125.72 255.08 321.29 342.71 261.51 423.33 161.57 244.29 388.31 88.54 60.90 139.60 85.31 195.21 94.67 62 ER13a ExonRegion 0 104.61 112.02 137.64 146.54 182.84 208.97 243.22 157.50 131.96 255.56 428.89 362.18 327.01 398.04 146.56 259.59 380.44 83.27 52.40 198.64 156.25 228.68 132.23 63 E13a_E14a KnownJunction 0 164.47 103.73 174.21 158.69 287.52 374.56 350.21 165.82 144.88 254.57 405.31 483.91 406.79 464.24 163.42 271.81 334.27 103.72 63.25 182.42 189.84 230.61 148.79 64 ER14a ExonRegion 0 111.30 114.34 163.80 166.97 244.49 290.06 293.82 154.06 166.02 294.24 439.22 397.69 419.95 409.48 190.64 311.82 361.95 98.20 81.43 230.76 160.89 277.56 166.60 65 E14a_E15a KnownJunction 0 126.99 100.71 145.88 200.47 219.10 254.00 337.58 177.65 162.64 289.44 318.40 505.36 452.89 315.62 199.77 352.81 280.22 91.32 133.84 242.05 59.00 297.23 195.48 66 I14_AR2 ActiveIntronRegion 0 23.22 16.25 40.46 43.22 20.84 12.15 41.96 41.50 16.91 28.89 3.20 21.23 21.37 2.47 12.96 9.14 9.49 3.27 7.77 20.59 1.52 5.05 9.71 67 E15_Aa NovelBoundary 0 9.63 17.76 61.06 33.53 19.10 7.55 37.85 18.73 24.16 16.76 2.68 18.91 26.78 9.89 0.00 0.00 4.77 2.11 4.80 19.56 2.29 6.00 17.84 68 ER15a ExonRegion 0 185.46 156.19 172.75 159.63 283.77 350.41 343.83 222.16 163.90 321.55 502.80 437.90 401.32 344.86 180.20 312.78 443.36 80.44 83.06 211.38 172.21 283.89 161.66 69 E15_Da NovelBoundary 0 15.78 10.85 55.82 29.93 58.66 16.35 33.87 12.20 13.02 27.96 2.00 12.60 6.82 2.18 20.89 3.93 12.06 1.78 0.00 12.40 0.00 6.25 0.00 70 E15a_E16a KnownJunction 0 204.41 136.82 145.15 135.45 275.47 366.10 395.26 173.70 111.17 273.86 393.20 483.16 329.85 279.18 162.19 191.06 245.16 50.90 57.51 195.59 136.40 192.21 149.30 71 I15_AR1 ActiveIntronRegion 0 23.27 13.30 26.92 20.72 38.42 15.25 58.92 25.37 11.10 18.06 5.17 11.70 15.02 2.81 10.00 6.39 10.27 4.56 6.37 15.96 3.61 4.58 9.38 72 ER16a ExonRegion 0 189.14 140.82 160.46 144.72 269.65 351.78 337.37 232.63 152.62 318.50 447.17 430.53 414.69 340.99 178.48 323.50 346.82 78.55 87.34 207.80 144.56 257.23 181.91 73 E16a_E17a KnownJunction 0 147.51 166.02 130.57 148.53 313.84 321.18 354.67 214.98 136.92 311.52 386.26 492.31 318.65 420.63 232.15 294.11 300.42 67.11 67.11 177.50 89.27 219.89 151.86 74 ER17a ExonRegion 0 190.77 147.88 133.01 141.25 338.86 341.84 326.54 190.25 137.41 294.04 444.70 431.56 354.57 355.27 195.70 299.79 288.50 86.87 47.78 225.62 101.11 233.58 181.29 75 E17a_E18a KnownJunction 0 193.89 137.94 109.13 141.61 352.97 412.77 296.02 169.39 129.83 264.72 310.92 317.50 350.30 343.99 162.31 296.76 176.53 70.06 54.31 240.14 100.82 256.87 222.37 76 ER18a ExonRegion 0 171.82 149.55 152.20 168.18 259.58 345.48 323.48 201.12 161.40 273.28 410.09 473.51 350.74 431.82 226.56 327.33 349.60 118.01 96.88 236.32 199.18 234.43 186.97 77 E18a_E19a KnownJunction 0 285.53 144.18 225.83 189.82 268.85 326.46 377.28 218.60 179.08 281.22 396.78 485.41 347.22 463.48 282.22 454.07 356.24 179.78 119.82 268.26 283.19 207.70 206.07 78 ER19a ExonRegion 0 141.58 213.58 188.14 190.40 240.68 218.41 267.44 194.73 121.06 242.08 171.33 311.88 223.84 195.48 157.25 131.46 136.31 47.15 50.04 147.25 58.70 190.58 78.52 79 IG4_AR1 ActiveIntergenicRegion 0 8.63 47.22 42.82 22.84 20.54 11.07 19.05 35.59 18.00 40.10 4.93 23.77 20.42 12.28 15.94 8.38 7.94 2.16 6.63 19.82 2.04 34.43 7.13