Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SNX11 Gene 0 100.36 31.29 82.28 56.28 87.18 81.82 70.48 83.70 48.84 102.95 461.18 82.25 76.58 289.32 239.25 352.79 442.03 50.35 48.47 48.11 37.89 29.51 24.07 2 393405 Transcript 0 6.84 0.42 3.21 3.60 14.20 3.41 3.63 2.54 3.72 2.26 11.64 4.40 4.57 0.83 7.20 16.15 14.79 4.14 6.33 3.79 2.99 3.04 0.69 3 359238 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 439357 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.05 12.48 0.00 0.00 0.00 4.45 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 5 452859 Transcript 0 0.00 0.56 0.68 0.91 0.00 0.00 0.29 0.00 0.34 0.00 5.37 3.61 4.17 0.63 2.10 3.63 9.17 0.00 0.00 0.00 0.73 0.00 1.47 6 ER1a ExonRegion 0 2.04 0.00 2.36 0.00 6.59 7.34 4.44 0.93 2.29 4.30 7.18 0.00 0.00 0.35 13.26 7.75 5.19 2.05 8.19 2.05 0.00 0.00 0.00 7 ER1b ExonRegion 0 8.24 1.86 2.89 4.15 12.79 8.29 6.50 4.13 4.74 14.40 33.15 3.95 4.42 19.17 15.76 42.19 42.44 4.48 7.14 4.72 3.50 2.44 1.00 8 E1_Ac KnownBoundary 0 10.52 5.39 10.56 12.42 10.95 13.86 10.78 17.99 13.69 26.75 44.54 0.00 13.47 30.55 56.25 85.62 111.27 13.85 27.67 16.68 10.63 8.39 3.59 9 ER1c ExonRegion 0 33.61 22.75 31.65 26.77 44.81 105.80 69.34 37.03 15.11 51.01 65.85 0.73 7.23 98.19 76.02 207.65 127.95 18.07 25.86 49.69 25.17 23.52 27.38 10 E1_Da NovelBoundary 0 0.00 0.00 3.55 2.03 4.33 17.55 16.30 2.38 7.15 7.31 2.68 0.00 0.00 0.00 4.45 26.40 7.85 0.00 0.00 0.00 0.00 0.00 10.24 11 E1a_E2a KnownJunction 0 11.19 0.00 4.52 9.76 18.85 0.00 4.06 4.56 3.07 1.29 2.32 0.00 5.68 0.00 0.00 26.32 17.48 6.84 4.14 3.07 5.99 9.98 0.00 12 E1a_E3a KnownJunction 0 64.01 47.62 69.51 43.55 87.35 234.52 148.56 81.82 33.85 86.66 103.82 11.85 25.00 93.06 50.93 198.24 116.32 39.42 37.55 76.76 49.42 25.29 38.16 13 E2_Aa NovelBoundary 0 11.34 3.35 5.97 7.92 8.66 8.40 6.71 21.89 0.00 10.10 5.32 0.00 6.82 4.59 4.33 25.12 9.54 0.00 4.80 2.94 0.00 0.00 12.98 14 ER2a ExonRegion 0 7.09 1.66 4.10 4.66 11.82 1.59 6.00 2.13 4.34 1.78 17.75 4.98 5.78 0.84 9.24 19.42 19.48 5.11 9.61 10.04 5.99 2.19 2.74 15 E2a_E3a KnownJunction 0 7.04 0.00 1.83 0.00 19.52 4.71 0.00 2.55 5.18 1.67 19.32 12.60 6.82 2.12 6.30 11.11 17.02 2.57 3.39 0.00 0.00 0.00 0.00 16 I2_AR1 ActiveIntronRegion 0 19.18 0.00 3.74 0.76 23.29 6.29 18.88 8.60 0.00 3.57 37.89 0.05 2.43 30.12 20.17 14.90 27.10 0.94 2.79 1.34 1.39 0.00 5.40 17 E3_Aa NovelBoundary 1 40.08 0.00 1.48 7.86 24.79 2.90 39.44 15.28 4.54 7.41 382.73 5.40 32.95 133.15 53.16 181.32 408.51 1.91 0.00 0.00 3.03 0.00 0.00 18 ER3a ExonRegion 1 41.56 25.18 44.05 25.10 66.75 102.83 71.71 54.05 26.86 65.08 421.69 36.45 24.05 148.59 121.01 318.23 461.29 30.50 29.71 27.89 28.33 10.76 13.99 19 E3_Da NovelBoundary 0 73.57 0.00 7.60 4.43 26.23 0.00 12.28 23.12 14.50 23.32 53.49 12.00 26.95 27.72 9.02 69.90 110.99 3.36 18.07 16.87 7.85 0.00 3.24 20 E3a_E5a KnownJunction 0 20.52 13.75 25.34 9.46 40.07 63.37 40.98 24.03 17.45 48.59 330.56 60.62 45.78 89.71 98.40 258.31 333.43 22.63 29.84 15.15 14.83 20.15 4.10 21 ER4a ExonRegion 0 0.00 0.56 0.68 0.91 0.00 0.00 0.29 0.00 0.34 0.00 5.37 3.61 4.17 0.63 2.10 3.63 9.17 0.00 0.00 0.00 0.73 0.00 1.47 22 I4 Intron 0 31.19 1.97 7.79 1.97 16.60 4.98 6.68 13.49 9.99 9.61 29.61 9.14 19.10 14.38 19.59 25.94 38.41 1.07 6.18 8.66 2.14 1.21 3.42 23 I4_AR1 ActiveIntronRegion 0 33.65 2.15 8.50 2.15 18.12 5.27 7.00 14.57 10.91 10.49 31.00 9.86 20.75 15.58 21.06 27.76 40.50 1.17 6.74 9.38 2.16 1.32 3.67 24 E5_Aa NovelBoundary 0 38.75 6.38 12.98 12.45 12.05 7.89 13.34 17.66 16.67 19.66 25.59 24.91 25.00 14.01 13.72 41.53 57.41 4.48 0.00 17.77 3.09 2.39 4.35 25 ER5a ExonRegion 0 27.61 11.85 55.01 34.53 39.12 39.37 35.50 62.90 33.69 91.73 497.93 80.92 66.74 201.58 120.59 228.14 490.54 41.67 40.68 43.82 49.77 27.95 12.49 26 E5a_E6a KnownJunction 1 45.86 18.48 98.96 60.86 54.75 44.75 54.89 120.96 51.94 110.81 771.14 125.44 118.82 339.93 201.74 286.25 1008.04 54.39 120.29 79.90 73.33 42.37 24.33 27 E5a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.05 12.48 0.00 0.00 0.00 4.45 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 28 E6_Aa NovelBoundary 0 7.26 2.89 5.35 1.66 46.43 0.00 17.93 16.27 4.54 4.92 15.27 0.00 12.99 7.42 18.79 26.75 23.66 0.00 0.00 8.44 2.47 3.12 4.18 29 ER6a ExonRegion 0 55.60 21.24 71.79 48.29 61.83 35.50 31.41 71.41 44.16 108.57 500.24 93.06 87.86 287.32 247.99 441.02 574.72 67.96 58.66 57.68 48.68 24.59 19.63 30 E6_Da NovelBoundary 0 48.53 3.35 5.65 9.26 29.71 7.27 9.80 26.25 11.37 18.51 16.69 0.00 19.80 9.59 4.82 29.74 16.92 6.26 11.67 12.59 3.15 0.00 11.35 31 E6a_E7a KnownJunction 0 38.75 37.10 88.64 43.52 85.40 71.61 61.25 42.14 45.83 99.31 527.45 129.04 64.93 267.70 190.00 542.25 491.91 78.43 76.14 51.71 36.94 27.74 8.54 32 I6 Intron 0 20.59 4.12 6.36 6.85 18.21 4.54 11.91 19.55 8.17 10.09 8.26 8.56 15.62 3.75 13.30 24.40 16.16 2.63 4.12 4.31 0.50 2.22 1.49 33 I6_AR1 ActiveIntronRegion 0 32.05 1.62 1.46 6.47 11.69 5.11 9.48 15.39 5.87 4.77 9.23 4.57 14.18 2.97 8.30 34.34 11.84 4.03 12.69 6.78 0.88 0.83 2.34 34 I6_SR1 SilentIntronRegion 0 19.51 5.78 9.12 8.75 23.74 5.06 14.71 26.41 10.62 13.69 9.32 11.83 20.87 4.66 16.79 26.37 19.63 2.93 2.74 4.22 0.57 2.86 1.78 35 E7_Aa NovelBoundary 0 38.45 0.00 4.82 13.98 36.50 2.90 11.70 18.15 7.73 13.16 16.95 17.11 15.10 22.78 21.26 22.47 21.51 9.78 8.47 12.08 0.00 3.00 4.18 36 ER7a ExonRegion 0 42.37 25.65 71.95 48.43 126.29 157.90 109.61 66.76 51.58 96.17 489.81 119.06 88.67 358.63 215.51 372.35 533.75 66.38 44.56 60.64 55.80 27.67 12.21 37 E7a_E8a KnownJunction 0 60.60 49.07 89.68 76.51 123.43 95.34 113.90 60.34 68.26 117.20 580.57 133.39 116.06 380.66 260.34 410.32 605.98 87.92 81.88 61.49 64.00 33.49 18.44 38 I7 Intron 0 29.16 0.00 0.54 2.38 7.84 2.15 2.33 6.79 3.24 5.51 5.10 2.09 3.40 8.71 13.71 6.97 4.84 1.35 1.87 3.12 0.00 1.22 0.00 39 I7_SR1 SilentIntronRegion 0 29.48 0.00 0.54 2.41 7.93 2.17 2.36 6.86 3.27 5.57 5.16 2.11 3.44 8.81 13.85 7.05 4.89 1.36 1.89 3.15 0.00 1.24 0.00 40 ER8a ExonRegion 0 74.84 31.98 90.30 56.43 83.99 94.38 74.93 87.43 65.65 107.93 611.36 119.03 91.97 399.56 245.57 431.84 621.16 75.15 57.01 67.60 60.32 23.30 20.94 41 E8_Da NovelBoundary 0 13.34 3.35 15.29 3.36 40.49 0.00 16.47 36.64 1.45 4.14 7.00 0.00 13.47 2.12 4.82 26.49 16.36 3.90 0.00 0.00 0.00 0.00 4.27 42 E8a_E9a KnownJunction 0 107.72 18.94 95.59 67.79 57.30 92.16 61.47 82.15 51.10 131.09 669.06 123.94 126.45 372.42 215.84 414.42 598.78 80.83 44.42 59.32 38.98 34.29 10.67 43 ER9a ExonRegion 0 138.17 39.80 103.23 71.30 107.11 94.05 84.85 105.19 58.48 124.82 536.84 94.53 92.45 342.15 301.72 412.35 492.26 56.33 57.03 53.37 39.85 37.31 31.00 44 IG27 Intergenic 0 17.22 1.39 6.09 5.37 16.14 3.87 10.52 13.68 5.05 8.90 9.38 4.26 10.72 6.79 9.16 13.77 12.98 2.76 2.80 3.14 0.95 1.60 1.40 45 IG27_AR1 ActiveIntergenicRegion 0 12.34 3.02 8.24 6.71 21.86 7.43 14.93 18.86 7.01 16.45 28.85 13.21 15.78 16.53 20.11 30.77 36.01 5.44 4.93 7.49 1.96 3.73 1.46 46 IG27_SR1 SilentIntergenicRegion 0 14.67 2.42 9.16 7.36 20.20 5.58 15.02 20.11 6.49 11.91 10.40 5.08 10.80 7.06 7.80 16.42 18.70 4.37 4.43 4.60 1.30 2.27 2.49 47 IG27_AR2 ActiveIntergenicRegion 0 15.99 2.03 16.75 5.45 27.65 9.17 10.30 16.13 7.96 13.51 7.09 4.33 18.76 4.15 11.28 16.84 19.44 1.85 3.19 4.26 5.63 0.00 2.94 48 IG27_AR3 ActiveIntergenicRegion 0 10.70 0.90 17.22 9.01 14.27 6.01 6.03 19.40 9.88 15.93 5.58 4.33 11.20 7.58 12.25 15.52 20.36 2.57 3.19 2.84 6.12 1.97 2.94 49 IG27_AR4 ActiveIntergenicRegion 0 12.41 0.00 18.49 9.54 14.59 4.33 7.40 26.95 11.34 25.60 5.10 1.97 16.63 7.60 10.02 29.05 26.11 3.70 3.19 0.00 4.41 3.60 0.00 50 IG27_AR5 ActiveIntergenicRegion 0 15.49 1.08 17.04 7.90 12.66 4.98 9.81 21.81 7.83 18.00 9.31 1.63 9.60 5.82 10.77 20.96 14.47 5.56 3.79 3.01 1.82 2.91 1.82 51 IG27_SR2 SilentIntergenicRegion 0 21.05 0.19 1.02 2.98 11.93 1.26 5.97 5.70 2.78 2.50 2.59 1.33 9.21 3.71 6.41 5.05 1.07 0.23 0.74 0.73 0.14 0.19 0.50