Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ARHGAP23 Gene 0 30.91 70.60 97.29 124.53 54.42 379.45 47.31 113.44 174.19 138.30 7.78 8.09 5.87 11.61 9.45 27.88 31.62 135.13 39.28 94.71 224.27 96.27 91.93 2 437668 Transcript 0 1.71 26.55 17.86 43.24 12.37 233.02 3.59 38.12 99.97 21.17 0.08 0.00 0.00 0.00 0.04 0.13 0.00 6.16 2.66 52.39 0.10 0.00 0.00 3 431231 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 443378 Transcript 0 0.85 1.40 4.23 3.86 2.16 7.42 5.34 2.22 3.68 5.40 0.00 0.41 0.22 0.09 0.00 0.85 0.76 2.27 4.05 10.98 7.28 0.84 1.69 5 IG26 Intergenic 0 11.89 36.75 46.09 59.68 35.96 102.47 52.57 33.49 28.23 48.54 17.72 10.63 10.54 17.51 11.12 11.55 14.22 48.07 22.01 42.18 8.83 10.95 12.22 6 IG26_AR1 ActiveIntergenicRegion 0 39.33 117.88 146.85 186.92 115.82 325.42 166.87 106.10 88.87 152.18 59.23 35.04 35.14 58.56 37.16 38.62 47.49 144.11 67.93 127.54 29.43 36.60 40.64 7 ER1a ExonRegion 0 6.79 0.00 0.21 0.04 0.00 3.23 3.55 0.33 2.67 0.64 0.00 0.00 0.00 2.17 3.32 21.65 24.05 3.67 2.58 3.68 29.17 11.38 38.13 8 E1a_E3a KnownJunction 0 0.00 0.00 2.42 3.80 0.00 2.16 1.68 1.77 3.88 2.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.72 0.00 2.43 10.32 2.82 0.00 9 ER2a ExonRegion 0 1.71 2.81 6.64 7.72 4.31 9.06 6.26 4.45 5.64 9.14 0.00 0.82 0.44 0.19 0.00 1.69 1.52 4.55 3.77 19.39 5.23 1.68 3.38 10 E2_Da NovelBoundary 0 0.00 0.00 12.63 12.59 8.49 23.57 5.79 3.78 7.67 12.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.17 21.27 9.46 2.59 0.00 0.00 11 E2a_E3a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 5.79 4.42 0.00 1.71 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.33 2.56 9.33 0.00 0.00 12 ER3a ExonRegion 0 4.85 11.85 31.08 38.71 10.12 63.99 8.97 44.67 86.66 70.33 1.83 3.05 5.36 3.10 8.22 15.87 23.72 121.63 33.25 70.93 167.75 39.34 44.23 13 E3a_E4a KnownJunction 1 6.52 21.38 38.35 63.86 36.16 185.06 4.24 51.92 111.14 76.29 0.00 6.30 12.66 7.30 14.22 55.54 13.65 205.61 36.52 84.05 144.81 76.85 97.40 14 E4a_E5a KnownJunction 0 16.52 21.77 42.81 63.36 43.80 245.71 17.27 53.85 111.72 101.70 0.00 0.00 0.00 12.48 0.00 22.64 34.22 69.48 18.92 85.01 133.19 69.44 89.29 15 ER4a ExonRegion 0 9.30 18.23 46.21 61.09 31.73 191.17 8.70 60.19 128.72 114.49 0.00 1.86 4.69 11.54 11.71 42.35 26.64 99.98 23.55 86.40 169.21 79.69 103.83 16 I4_SR2 SilentIntronRegion 0 5.73 14.00 8.57 25.76 7.68 21.61 13.98 16.22 11.53 12.57 0.00 2.71 1.03 0.36 0.54 0.00 5.16 12.95 4.23 13.74 9.94 0.00 3.90 17 E5_Aa NovelBoundary 0 39.34 11.05 17.86 55.94 0.00 30.66 10.91 17.83 18.84 17.11 0.00 5.70 0.00 0.00 0.00 4.36 0.00 18.78 8.66 18.41 5.25 0.00 3.59 18 ER5a ExonRegion 0 13.67 38.43 66.41 73.89 27.01 342.52 30.51 84.66 157.98 140.97 4.73 9.25 7.96 12.67 14.48 29.35 38.96 140.10 49.37 113.25 281.34 88.29 97.12 19 E5a_E6a KnownJunction 0 16.74 73.47 90.45 98.26 12.39 290.46 38.69 110.74 211.46 194.78 6.69 38.86 6.49 17.25 4.45 39.65 45.63 215.89 78.68 131.54 264.41 116.89 147.17 20 ER6a ExonRegion 0 12.75 50.04 89.14 126.47 33.13 331.89 45.30 125.35 241.64 232.59 7.85 15.24 6.11 17.31 23.83 34.54 67.77 234.57 92.58 139.72 427.83 131.39 82.45 21 E6_Da NovelBoundary 0 7.19 21.71 9.91 36.26 12.14 63.37 14.40 33.56 12.41 13.86 0.00 0.00 0.00 0.00 0.00 0.00 4.39 22.84 4.80 8.88 10.56 0.00 14.77 22 E6a_E7a KnownJunction 1 7.26 54.92 96.15 157.82 50.76 456.90 47.39 147.05 324.88 278.45 12.37 6.30 0.00 20.01 19.53 41.36 100.23 299.54 63.06 168.23 579.35 101.71 83.31 23 ER7a ExonRegion 0 11.78 36.97 70.09 114.26 21.80 277.14 25.93 109.80 244.40 204.63 6.15 15.82 19.95 20.20 10.71 45.55 69.98 259.05 63.30 150.99 368.26 114.67 79.40 24 E7a_E8a KnownJunction 0 12.82 16.18 52.45 86.30 3.65 207.72 10.16 68.39 173.23 146.93 2.53 24.31 34.25 24.31 15.20 43.75 64.52 193.59 35.30 142.09 298.57 112.00 122.92 25 ER8a ExonRegion 0 9.79 26.96 60.14 63.05 18.85 240.91 27.17 88.13 159.12 137.65 2.71 8.92 8.46 12.89 9.61 28.23 31.90 160.19 33.21 88.05 260.70 87.78 90.76 26 E8a_E9a KnownJunction 0 35.56 105.18 126.19 131.68 58.57 684.15 59.80 142.36 317.21 233.40 7.11 30.91 12.82 24.78 13.35 36.74 55.07 260.29 47.06 194.50 597.02 107.04 184.13 27 ER9a ExonRegion 0 22.35 45.08 109.16 143.38 51.39 558.34 67.40 144.76 283.05 209.01 11.08 17.96 18.61 21.62 16.14 50.13 51.10 219.86 74.04 146.88 473.91 162.69 178.38 28 E9_Da NovelBoundary 0 14.89 9.41 4.70 6.33 0.00 5.74 12.94 7.68 6.25 5.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.97 17.13 2.36 2.72 0.00 15.88 29 E9a_E10a KnownJunction 0 13.11 34.40 71.46 151.36 56.79 400.56 47.12 89.71 180.35 145.83 0.00 7.50 39.77 16.95 15.58 44.95 26.37 200.01 37.18 92.17 322.91 147.39 130.01 30 ER10a ExonRegion 0 5.22 24.35 67.54 81.63 20.88 242.08 34.15 74.51 160.23 121.10 0.93 16.16 12.65 16.68 9.74 23.03 25.26 123.75 48.18 86.42 292.52 99.13 98.77 31 E10a_E11a KnownJunction 0 9.71 17.50 106.47 88.90 27.08 249.80 28.26 87.78 182.69 127.51 0.00 36.16 0.00 10.48 10.14 11.36 39.27 133.94 11.58 65.07 283.00 80.71 85.88 32 ER11a ExonRegion 0 9.31 23.84 76.73 80.22 27.36 244.75 21.85 78.47 170.87 126.83 3.40 14.63 7.84 14.11 9.05 26.65 33.63 102.87 15.65 88.52 284.62 73.71 92.00 33 E11a_E12a KnownJunction 0 19.71 20.65 74.78 122.46 18.85 327.99 29.28 84.90 193.98 159.86 0.00 0.00 19.15 13.83 19.28 31.19 36.00 166.97 43.95 129.43 266.45 73.42 103.80 34 ER12a ExonRegion 0 11.61 33.14 67.15 88.63 28.26 380.77 49.11 95.86 175.26 131.85 1.37 10.70 8.37 14.66 8.04 32.12 39.40 185.28 56.98 96.65 277.68 86.26 96.40 35 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 ER13a ExonRegion 0 2.37 22.82 19.87 23.98 9.73 180.92 24.18 34.53 73.24 46.18 1.24 1.63 1.37 4.62 2.44 6.70 10.28 78.15 15.95 27.79 97.72 23.97 34.27 37 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER14a ExonRegion 0 0.00 34.67 32.91 30.58 9.97 197.81 30.88 23.70 57.13 36.57 0.47 0.98 0.00 1.20 0.00 12.42 6.23 78.77 10.99 16.58 30.00 34.21 32.68 39 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER15a ExonRegion 0 6.16 61.22 71.53 88.06 17.97 250.85 38.81 75.59 127.47 92.16 1.87 6.35 1.40 9.34 4.65 17.22 18.77 154.53 22.27 55.97 150.64 74.45 73.53 41 E15a_E16a KnownJunction 0 13.34 108.34 85.09 134.81 55.09 510.50 76.22 77.10 147.13 96.22 2.21 6.30 0.00 12.30 5.44 59.04 30.95 178.54 45.37 86.61 236.55 93.63 140.34 42 ER16a ExonRegion 0 23.94 106.45 124.35 136.17 80.18 628.39 91.52 113.99 193.83 159.88 4.96 12.56 8.88 16.57 10.11 36.81 41.40 198.33 34.60 95.03 289.03 130.20 92.43 43 E16a_E17a KnownJunction 0 13.19 156.16 121.88 221.48 109.85 493.81 88.63 149.59 229.31 195.96 0.00 17.11 33.11 25.60 24.60 31.62 36.84 280.27 49.41 123.17 279.48 148.31 117.97 44 ER17a ExonRegion 0 12.75 95.63 134.82 171.67 68.42 567.89 77.62 145.17 246.66 186.50 6.38 21.76 17.41 21.16 15.73 35.67 50.76 231.24 36.88 141.84 350.73 139.06 115.66 45 E17a_E18a KnownJunction 0 14.67 101.56 188.99 247.59 91.00 471.38 55.51 190.99 292.99 208.96 0.00 0.00 15.10 21.37 27.32 62.46 57.41 317.12 85.84 154.55 338.66 170.84 179.43 46 E17a_E19a NovelJunction 0 0.00 0.00 0.00 5.29 8.57 22.66 0.00 2.55 3.07 10.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.72 2.82 0.00 47 ER18a ExonRegion 0 16.96 110.30 189.78 265.47 80.61 654.60 91.44 206.04 332.59 198.39 13.31 13.87 26.54 28.72 15.94 56.92 65.27 282.19 72.66 152.87 419.65 187.31 157.46 48 E18a_E19a KnownJunction 0 30.82 162.73 207.06 278.39 175.72 1153.99 135.31 249.98 395.45 212.93 17.95 25.96 40.42 29.90 20.64 59.81 95.28 263.15 92.14 239.56 508.37 184.80 172.01 49 I18_AR1 ActiveIntronRegion 0 5.91 2.84 5.60 28.63 8.39 15.01 8.51 9.65 10.41 13.63 0.00 1.25 0.00 0.00 0.00 2.08 3.46 13.98 0.00 6.91 10.17 2.91 18.46 50 E19_Aa NovelBoundary 0 10.00 24.07 16.41 41.95 12.99 53.09 22.13 16.43 15.77 8.65 0.00 0.00 0.00 0.00 0.00 0.00 3.74 25.41 3.95 12.34 21.75 0.00 24.41 51 ER19a ExonRegion 0 17.96 89.34 159.89 207.05 87.40 647.28 98.31 187.35 300.05 183.49 15.12 22.70 18.82 16.72 14.74 53.70 57.63 222.25 50.36 142.96 392.14 140.83 133.46 52 E19a_E20a KnownJunction 0 3.41 53.54 121.99 186.32 43.55 453.72 48.05 129.59 253.12 159.69 15.69 20.26 6.98 13.42 8.90 24.44 53.67 213.36 30.31 53.31 252.67 84.87 70.68 53 ER20a ExonRegion 0 19.10 123.01 203.04 274.88 75.96 763.25 90.71 209.18 357.26 219.36 22.23 22.13 10.32 20.16 13.31 54.46 63.67 332.99 108.97 128.58 403.47 164.30 193.00 54 E20a_E21a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55 ER21a ExonRegion 0 8.47 65.51 144.73 208.86 52.05 515.81 55.95 156.34 268.72 202.33 17.61 11.27 10.72 12.94 13.33 42.58 42.10 193.74 57.61 108.49 298.69 126.78 150.33 56 E21a_E22a KnownJunction 0 14.22 41.97 85.04 148.87 75.98 442.13 57.81 69.25 188.16 127.76 6.84 0.00 0.00 4.94 6.30 12.56 26.55 153.71 71.06 61.74 235.87 108.14 80.67 57 I21_AR1 ActiveIntronRegion 0 4.94 22.37 15.22 28.62 7.14 50.12 18.87 13.83 16.67 15.67 0.00 3.61 0.00 1.89 0.00 5.94 5.78 26.79 9.82 22.34 20.94 6.95 20.56 58 ER22a ExonRegion 0 15.12 63.14 109.15 200.54 70.21 554.86 69.89 127.37 230.23 173.37 19.28 22.16 3.57 7.00 12.43 31.07 44.88 185.61 65.60 88.09 292.99 121.24 108.17 59 E22_Da NovelBoundary 0 6.89 5.99 5.41 7.49 11.80 13.80 9.67 6.86 6.42 4.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.89 19.01 9.14 13.78 0.00 0.00 60 E22a_E23a KnownJunction 0 21.19 82.16 110.85 200.94 71.05 548.04 78.39 146.18 195.02 142.88 7.05 17.86 6.82 10.12 6.30 34.95 51.80 146.21 53.55 109.81 223.94 99.69 95.95 61 ER23a ExonRegion 0 14.38 57.88 98.41 142.92 40.52 407.59 50.16 108.25 193.17 155.94 3.73 8.53 6.58 11.62 8.91 22.83 31.61 106.71 34.55 72.58 202.20 83.21 93.85 62 E23a_E24a KnownJunction 0 3.56 29.47 1.21 33.00 20.46 267.74 3.71 46.58 105.87 15.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 52.92 0.00 0.00 0.00 63 E23a_E25a KnownJunction 0 3.33 34.47 60.05 59.07 60.36 194.77 32.99 15.28 18.55 61.86 7.11 6.30 6.82 4.36 9.27 22.64 22.91 63.63 15.91 24.16 199.97 61.42 116.09 64 E24a_E25a KnownJunction 0 0.00 22.69 29.83 37.76 3.74 190.12 4.06 25.84 64.41 15.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.28 4.80 49.86 0.00 0.00 0.00 65 ER24a ExonRegion 0 1.56 27.50 22.54 58.96 12.91 241.18 2.99 41.93 129.63 32.11 0.25 0.00 0.00 0.00 0.13 0.39 0.00 5.62 3.19 54.39 0.29 0.00 0.00 66 I24 Intron 0 3.24 18.61 13.23 44.08 15.29 96.56 14.51 22.04 19.95 23.06 0.30 1.56 0.60 0.76 0.80 1.11 2.47 26.59 6.67 23.46 16.79 2.60 7.70 67 I24_SR1 SilentIntronRegion 0 3.24 18.63 13.25 44.14 15.31 96.68 14.53 22.07 19.97 23.09 0.30 1.56 0.60 0.76 0.81 1.12 2.48 26.62 6.67 23.49 16.81 2.61 7.71 68 E25_Aa NovelBoundary 0 22.23 36.84 20.43 72.85 36.84 151.28 26.50 36.02 14.79 22.40 2.21 7.65 0.00 2.47 0.00 0.00 3.83 5.51 0.00 37.97 14.39 4.65 12.98 69 ER25a ExonRegion 0 2.98 53.51 95.85 148.72 57.44 439.71 31.86 77.78 163.23 123.08 17.94 14.75 2.20 9.80 14.69 23.78 27.64 107.63 16.32 58.24 219.82 60.29 96.18 70 E25_Da NovelBoundary 0 0.00 2.50 17.18 22.24 3.74 34.98 32.72 22.67 16.98 13.73 0.00 0.00 6.82 0.00 0.00 0.00 4.39 22.84 12.24 12.21 21.81 8.82 44.30 71 E25a_E26a KnownJunction 0 7.19 66.44 73.62 157.16 67.83 480.12 37.01 88.93 146.41 136.51 25.22 32.86 0.00 11.65 19.41 27.43 34.97 168.26 21.27 43.46 222.52 71.77 101.41 72 ER26a ExonRegion 0 5.87 46.74 52.92 64.27 37.34 303.22 26.47 50.89 91.70 89.96 7.35 6.93 3.06 10.00 7.95 15.71 29.62 71.67 19.38 56.54 151.88 51.14 69.98 73 E26_Da KnownBoundary 0 0.00 39.86 32.73 15.58 20.12 184.38 10.20 32.74 60.44 82.60 4.63 0.00 0.00 11.95 14.34 4.10 25.62 86.55 3.76 48.96 114.60 24.80 34.15 74 ER26b ExonRegion 0 70.29 128.06 150.01 196.16 101.25 537.99 67.54 167.58 214.15 172.24 13.55 6.25 2.79 12.07 10.72 32.23 33.15 125.17 47.03 120.48 219.73 125.80 109.09