Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MYO1D Gene 0 24.28 23.33 132.16 36.18 40.15 72.28 30.92 48.66 39.78 98.37 12.44 33.87 16.61 7.25 77.41 0.12 0.06 18.80 43.57 9.35 220.22 379.97 337.79 2 394649 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.39 3 318217 Transcript 0 32.67 37.77 129.25 42.70 58.29 101.53 47.94 59.62 48.53 114.69 14.80 52.96 26.12 8.89 95.59 0.27 0.00 22.88 55.19 13.62 264.96 530.24 426.74 4 ER1a ExonRegion 0 0.02 3.90 9.80 4.79 1.73 14.05 2.33 8.09 9.87 13.48 3.94 2.99 6.44 1.62 20.85 0.00 0.00 5.56 11.88 6.62 100.98 81.59 76.82 5 E1a_E2a KnownJunction 0 0.00 0.00 19.25 11.09 11.97 47.02 8.17 19.26 17.77 24.55 4.95 29.86 14.28 9.65 47.10 0.00 0.00 10.40 18.35 16.87 164.27 116.16 161.85 6 I1_AR2 ActiveIntronRegion 0 14.00 4.65 9.01 1.79 5.11 2.20 7.61 6.25 3.76 3.69 0.34 5.25 1.51 0.00 4.59 0.00 0.00 1.59 0.70 1.90 2.78 1.70 7.31 7 ER2a ExonRegion 0 7.75 8.84 27.25 13.86 11.52 32.96 15.55 31.41 25.88 48.98 12.43 38.57 18.98 9.11 44.82 0.00 0.00 8.06 41.59 12.88 227.40 225.97 233.55 8 E2a_E3a KnownJunction 0 20.97 6.64 38.38 19.48 20.29 60.19 25.79 37.09 21.04 69.73 15.48 76.67 26.78 14.48 62.92 0.00 0.00 11.23 60.24 11.76 224.31 318.60 246.10 9 ER3a ExonRegion 0 14.88 11.90 40.75 21.43 28.55 41.94 23.65 35.08 37.51 64.53 17.85 55.87 30.83 12.01 53.89 0.00 0.00 14.47 52.86 10.43 233.69 350.43 303.10 10 E3a_E4a KnownJunction 0 26.23 17.56 30.37 12.59 32.17 44.75 25.88 30.31 42.04 65.73 20.01 25.66 37.98 14.07 53.03 0.00 0.00 8.37 33.22 18.73 192.75 364.09 334.45 11 ER4a ExonRegion 0 12.37 12.31 43.07 20.18 29.13 54.46 29.32 31.38 39.29 79.36 20.98 50.68 23.96 10.53 43.59 0.00 0.00 7.81 45.52 11.54 188.66 373.80 298.32 12 E4a_E5a KnownJunction 0 17.26 12.43 41.78 29.43 29.03 81.83 28.79 34.26 35.71 79.62 12.90 57.47 47.56 11.77 53.16 0.00 0.00 0.00 21.65 20.52 129.98 401.94 248.32 13 ER5a ExonRegion 1 9.25 15.55 34.36 25.92 39.74 59.36 31.87 30.28 30.56 80.92 12.28 75.69 35.26 10.41 44.22 0.00 0.00 6.71 30.91 6.82 122.27 446.07 328.47 14 E5_Da NovelBoundary 0 18.08 34.47 29.60 15.75 0.00 0.00 1.72 7.48 5.38 1.21 0.00 0.00 8.12 0.00 0.00 0.00 0.00 0.00 0.00 3.26 3.09 0.00 0.00 15 E5a_E6a KnownJunction 0 18.60 10.52 32.49 21.08 53.31 80.92 28.84 27.48 25.46 85.10 17.32 54.32 28.41 14.89 43.88 0.00 0.00 10.69 36.52 3.13 158.27 452.82 395.66 16 ER6a ExonRegion 0 16.95 15.78 55.79 19.00 29.41 73.24 26.04 32.62 35.75 78.36 24.75 46.59 26.82 8.61 43.31 0.00 0.00 9.55 46.72 9.69 140.23 402.42 333.40 17 E6a_E7a KnownJunction 0 15.93 11.97 44.85 28.93 31.58 91.08 43.77 37.58 29.80 79.73 14.48 24.46 47.89 9.65 48.58 0.00 0.00 15.84 33.41 5.62 132.33 368.75 258.82 18 ER7a ExonRegion 0 17.53 13.21 44.96 19.81 32.34 77.47 32.92 31.70 30.17 87.65 22.50 77.56 33.39 10.76 40.74 0.00 1.44 11.20 27.25 11.38 135.76 430.24 328.75 19 E7a_E8a KnownJunction 0 27.04 0.00 58.51 19.11 44.82 93.98 28.88 35.08 39.64 81.61 14.48 56.12 33.44 12.01 87.64 0.00 0.00 10.49 28.24 5.88 128.56 396.06 438.85 20 ER8a ExonRegion 0 18.43 20.63 43.57 25.33 41.12 90.44 31.83 35.87 37.21 86.47 20.84 56.45 24.99 11.47 57.94 0.00 0.83 17.45 30.85 8.58 208.49 433.20 329.87 21 E8a_E9a KnownJunction 0 11.11 36.38 49.35 28.83 44.23 92.96 43.10 43.17 33.54 87.17 16.90 65.27 46.43 24.31 85.42 0.00 0.00 25.78 20.14 9.52 202.38 516.14 349.14 22 ER9a ExonRegion 0 15.73 27.94 68.72 30.94 51.87 93.10 37.59 41.38 41.25 87.65 16.43 58.77 36.40 10.76 68.30 0.00 0.00 18.64 44.31 11.22 196.28 495.85 379.07 23 E9a_E10a KnownJunction 0 27.49 31.90 104.96 35.33 20.71 93.18 21.86 53.64 44.94 102.75 17.27 73.37 48.54 9.77 86.28 0.00 0.00 24.95 49.51 14.70 93.41 553.92 416.49 24 ER10a ExonRegion 0 21.88 46.33 77.32 35.61 34.32 71.34 35.18 48.43 42.60 90.67 20.91 87.04 37.03 12.74 49.20 0.00 0.00 15.60 48.25 17.24 215.25 479.39 357.35 25 E10a_E12a KnownJunction 0 20.52 67.95 75.40 26.87 77.76 90.06 58.43 41.90 37.76 94.07 16.64 73.82 26.62 4.36 38.94 0.00 0.00 3.40 31.15 8.76 201.02 472.85 284.52 26 ER11a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.39 27 ER12a ExonRegion 1 17.59 60.77 91.03 36.92 57.05 88.69 52.92 50.87 44.62 100.44 15.97 84.64 39.71 13.77 59.86 0.00 0.00 24.69 47.50 20.59 257.29 545.46 383.17 28 E12a_E13a KnownJunction 0 29.93 34.53 105.61 48.78 45.93 61.90 37.63 62.43 39.53 131.81 12.00 82.08 40.74 12.13 73.80 0.00 0.00 17.45 17.60 26.40 284.86 563.96 243.46 29 ER13a ExonRegion 1 23.61 41.30 102.09 38.56 71.38 76.99 54.64 48.27 33.28 112.07 8.93 95.92 33.03 14.34 73.31 0.00 0.00 16.03 52.36 12.41 220.53 588.40 374.36 30 E13a_E14a KnownJunction 0 21.11 54.79 96.24 47.55 59.34 112.15 84.39 29.24 37.59 118.03 16.74 66.17 32.47 12.07 89.87 0.00 0.00 20.52 39.25 6.01 192.87 670.94 400.95 31 ER14a ExonRegion 0 36.32 63.83 80.04 49.32 70.60 113.70 89.80 52.68 42.92 99.98 20.02 71.06 32.33 17.06 87.42 0.00 0.00 20.03 51.01 20.31 242.47 722.98 484.00 32 E14a_E15a KnownJunction 0 60.38 40.78 119.54 45.38 90.49 109.31 74.15 83.75 68.84 121.23 20.01 91.38 26.78 12.42 125.84 0.00 0.00 16.75 57.41 22.43 265.02 703.21 480.08 33 ER15a ExonRegion 0 31.86 61.24 109.47 41.41 55.87 76.28 45.83 67.98 58.86 102.20 16.71 72.66 40.45 9.57 84.03 1.05 0.00 17.35 60.79 16.48 263.42 505.81 429.88 34 E15a_E16a KnownJunction 0 22.23 71.04 114.99 63.83 50.51 81.83 63.15 111.31 65.31 116.23 25.01 77.28 26.78 7.06 112.49 0.00 0.00 18.28 75.01 26.21 315.74 853.66 535.82 35 ER16a ExonRegion 1 22.32 35.52 134.24 42.62 66.75 98.72 61.15 89.34 62.02 104.97 14.17 77.07 40.64 11.95 98.45 0.57 0.00 30.52 84.00 17.16 329.01 658.14 548.06 36 E16a_E17a KnownJunction 0 20.89 36.97 143.02 28.53 90.24 175.58 57.10 97.30 63.92 117.06 22.01 67.97 63.79 7.42 112.12 4.36 0.00 32.33 99.30 26.14 347.81 722.86 751.28 37 ER17a ExonRegion 0 40.37 30.51 130.35 50.83 49.05 110.05 46.50 67.29 51.49 110.80 17.77 59.41 31.18 12.75 101.06 0.33 0.00 31.19 79.48 12.58 289.37 527.66 461.89 38 E17a_E18a KnownJunction 0 26.75 21.84 123.00 52.91 18.93 96.93 42.44 31.71 32.35 89.40 13.95 25.06 5.84 11.95 78.62 0.00 0.00 31.26 45.46 9.01 232.22 296.43 321.65 39 ER18a ExonRegion 0 24.21 24.84 95.47 33.52 29.71 88.57 28.32 33.83 33.13 73.52 14.00 32.84 11.60 6.64 78.04 0.00 0.00 20.56 39.13 9.55 249.23 302.21 312.80 40 E18a_E19a KnownJunction 0 28.45 19.01 102.66 29.93 50.59 93.41 41.51 29.29 22.51 68.20 22.27 36.31 6.82 6.77 56.86 0.00 0.00 22.84 32.28 5.56 268.79 309.54 377.73 41 ER19a ExonRegion 0 21.65 28.43 105.95 27.56 45.21 91.53 29.25 32.17 34.08 92.61 11.42 19.89 9.35 5.88 90.18 0.00 0.00 25.00 30.10 9.48 271.22 340.27 341.04 42 E19a_E20a KnownJunction 0 38.97 27.50 145.68 38.86 64.94 53.89 44.52 43.78 49.59 118.03 17.00 29.11 25.00 5.30 86.28 0.00 0.00 23.88 47.44 8.69 328.72 422.27 431.94 43 ER20a ExonRegion 0 43.28 16.33 143.50 37.10 53.44 92.70 37.61 51.05 49.49 130.74 10.75 27.38 22.20 6.77 120.47 0.00 0.00 23.25 57.06 14.22 219.70 453.00 416.11 44 E20a_E21a KnownJunction 0 68.46 20.92 153.90 40.02 64.26 164.91 35.24 57.34 59.78 139.47 7.32 18.46 13.64 2.47 166.51 0.00 0.00 30.84 78.87 12.91 185.95 610.44 473.08 45 ER21a ExonRegion 0 45.93 32.31 193.40 48.42 69.03 130.12 42.72 71.05 56.06 155.57 12.61 23.32 11.56 11.21 126.33 0.00 0.00 19.76 55.83 11.63 215.98 594.90 461.98 46 E21a_E22a KnownJunction 0 51.86 31.38 186.48 56.14 74.19 175.07 36.21 69.78 48.44 131.97 9.84 29.71 26.46 2.47 126.21 0.00 0.00 23.59 56.75 9.27 274.11 480.50 466.25 47 ER22a ExonRegion 0 31.78 36.15 200.70 56.09 53.33 85.72 37.61 96.09 70.22 159.09 12.20 55.28 30.23 7.76 132.54 0.00 0.00 30.42 79.88 12.94 311.22 604.68 508.42 48 E22a_E23a KnownJunction 0 29.04 31.70 162.27 42.62 53.06 105.68 25.53 62.56 65.57 159.00 9.48 45.46 25.65 7.59 92.09 0.00 0.00 30.22 70.50 2.88 383.39 475.29 449.35 49 I22_AR1 ActiveIntronRegion 0 11.53 5.54 5.36 8.63 7.30 3.60 8.08 7.86 4.41 8.94 0.63 5.08 2.89 0.15 4.58 0.00 0.00 1.60 2.43 2.78 1.44 8.63 13.76 50 I22_SR2 SilentIntronRegion 0 11.10 9.18 11.09 8.72 10.80 4.37 7.37 13.27 6.61 7.83 0.43 3.09 2.84 0.04 7.86 0.09 0.00 1.17 3.24 2.37 3.15 8.15 19.51 51 I22_AR7 ActiveIntronRegion 0 13.14 6.78 14.71 5.80 11.25 7.44 6.42 15.99 4.19 7.88 0.37 2.08 2.97 0.00 7.71 0.00 0.00 2.75 6.25 3.37 5.60 7.01 22.81 52 I22_AR8 ActiveIntronRegion 0 14.29 4.69 4.29 5.83 4.59 1.90 2.90 4.26 2.68 3.90 0.28 0.74 0.87 0.00 4.16 0.00 0.00 0.68 2.83 2.49 4.46 4.09 11.19 53 I22_AR21 ActiveIntronRegion 0 12.88 1.99 2.93 3.15 9.56 2.93 11.18 1.91 2.14 4.21 0.00 4.47 0.00 0.00 2.87 0.00 0.00 1.49 9.73 1.27 7.10 4.88 24.59 54 ER23a ExonRegion 0 26.59 16.95 186.87 40.93 37.31 62.91 23.91 49.84 37.35 106.02 8.40 8.84 4.01 3.73 82.78 0.13 0.00 18.96 36.48 5.37 208.98 300.27 303.83