Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLFN12 Gene 0 29.30 1.23 5.10 5.77 15.61 7.09 7.11 7.04 10.48 5.20 62.88 63.17 44.83 81.02 31.43 38.66 28.43 0.09 0.05 0.07 16.04 12.61 9.71 2 428476 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 394562 Transcript 0 0.00 0.00 0.00 0.00 2.95 0.00 0.66 0.00 0.00 0.00 4.39 6.00 3.25 2.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.78 2.18 4 447040 Transcript 0 0.00 0.00 1.77 1.37 0.00 0.00 2.08 0.00 3.56 1.56 7.63 0.00 0.00 17.42 4.45 16.06 12.90 0.00 0.00 0.00 5.99 0.00 0.00 5 445092 Transcript 0 0.00 0.00 0.00 0.00 0.06 0.00 0.24 1.18 0.03 0.29 14.90 12.37 11.13 15.32 0.00 0.00 5.40 0.00 0.00 0.82 0.40 2.42 3.71 6 304905 Transcript 0 9.28 0.39 0.00 0.16 5.65 1.96 1.68 0.52 0.72 0.07 31.65 4.23 5.36 15.51 5.77 12.30 9.03 0.63 0.62 0.32 11.22 3.64 10.99 7 452764 Transcript 0 4.23 2.03 1.23 0.45 4.46 8.56 3.09 1.15 2.06 2.29 32.86 11.55 6.25 34.65 9.67 13.87 18.71 0.00 0.00 0.00 11.02 2.78 3.92 8 479326 Transcript 0 33.17 0.00 1.13 4.69 12.97 3.20 3.42 4.58 6.44 2.14 20.03 26.32 34.49 27.24 14.11 18.68 11.90 0.00 0.00 0.00 3.00 4.09 4.32 9 460530 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.11 0.00 0.00 0.00 6.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.84 10 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1_Ac KnownBoundary 0 18.37 0.00 0.00 0.00 0.00 2.90 0.00 1.73 1.53 0.00 10.37 5.55 14.77 16.60 8.90 25.29 13.56 0.00 0.00 0.00 2.47 6.00 8.71 12 ER1b ExonRegion 0 5.12 0.00 0.00 0.00 0.00 1.77 0.00 0.00 1.08 0.00 5.92 0.00 3.93 8.12 7.77 10.55 7.03 0.00 0.00 0.00 0.00 3.09 4.55 13 E1_Ad KnownBoundary 0 13.19 0.00 0.00 0.00 4.33 2.90 0.00 0.00 1.77 2.04 15.21 0.00 0.00 19.07 0.00 7.60 4.77 0.00 0.00 0.00 2.35 6.25 0.00 14 ER1c ExonRegion 0 11.96 0.00 0.00 0.41 0.40 5.96 0.66 0.00 1.42 0.92 16.24 0.00 4.69 29.07 4.93 24.67 14.36 0.00 0.00 0.00 1.10 6.77 5.87 15 ER1d ExonRegion 0 9.40 1.25 1.32 3.99 4.78 7.00 2.28 1.30 7.28 2.99 24.22 12.50 12.02 41.74 7.56 30.08 18.40 0.00 0.00 0.00 8.52 3.37 2.67 16 E1a_E2b KnownJunction 0 10.37 0.00 0.00 3.43 16.21 2.27 4.15 2.46 6.39 1.32 32.01 38.56 6.66 27.90 0.00 4.36 18.51 0.00 0.00 0.00 5.99 5.57 0.00 17 E1a_E4b KnownJunction 0 0.00 0.00 1.77 1.37 0.00 0.00 2.08 0.00 3.56 1.56 7.63 0.00 0.00 17.42 4.45 16.06 12.90 0.00 0.00 0.00 5.99 0.00 0.00 18 E2_Aa NovelBoundary 0 3.63 3.35 2.96 0.00 4.33 5.79 0.00 0.00 0.00 0.00 14.74 0.00 15.10 7.06 4.45 13.07 0.00 0.00 0.00 0.00 0.00 0.00 13.06 19 ER2a ExonRegion 0 9.28 0.39 0.00 0.16 5.65 1.96 1.68 0.52 0.72 0.07 31.65 4.23 5.36 15.51 5.77 12.30 9.03 0.63 0.62 0.32 11.22 3.64 10.99 20 E2_Ab KnownBoundary 0 0.00 0.00 9.05 5.99 3.40 5.05 2.21 2.46 3.50 2.87 23.80 16.66 0.00 32.73 9.15 19.40 9.16 7.67 0.00 2.75 19.46 4.84 30.30 21 ER2b ExonRegion 0 3.90 1.59 0.55 1.70 15.90 14.40 4.95 4.56 2.85 2.59 62.53 41.04 24.54 65.20 14.13 29.38 22.44 1.61 0.00 0.34 20.15 9.63 15.70 22 E2_Da NovelBoundary 0 0.00 3.22 24.66 36.96 16.64 0.00 2.16 18.61 23.87 8.14 2.68 0.00 6.82 0.00 0.00 3.93 13.56 24.17 0.00 3.13 0.00 0.00 0.00 23 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.64 0.00 0.00 16.79 17.26 12.66 17.72 0.00 0.00 4.21 0.00 0.00 0.00 0.00 2.76 4.35 24 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 3.23 0.00 0.00 0.00 0.00 0.00 4.42 12.00 6.49 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.35 25 E2a_E4b KnownJunction 0 0.00 6.38 2.75 0.00 12.14 35.89 3.71 0.00 2.84 2.98 67.60 23.71 20.45 52.45 19.41 13.07 25.99 0.00 0.00 0.00 22.92 6.12 15.28 26 E3_Aa NovelBoundary 0 0.00 0.00 16.06 21.24 4.07 0.00 0.00 8.30 15.51 8.54 0.00 6.30 0.00 0.00 0.00 3.42 0.00 6.84 0.00 0.00 0.00 0.00 0.00 27 E3_Ab NovelBoundary 0 2.89 2.83 109.34 72.78 0.00 4.88 9.32 24.56 26.30 31.70 6.79 0.00 0.00 6.95 0.00 7.35 24.50 35.24 0.00 30.10 0.00 2.39 0.00 28 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.12 0.00 0.48 0.71 0.06 0.57 13.00 7.48 9.59 12.92 0.00 0.00 6.60 0.00 0.00 1.64 0.80 2.08 3.07 29 ER3b ExonRegion 0 1.49 0.00 0.00 0.00 0.13 0.00 1.09 0.59 0.72 0.72 13.04 10.77 18.45 17.80 6.40 8.72 4.96 0.00 0.00 0.60 2.93 0.90 1.87 30 E3_Da NovelBoundary 0 0.00 0.00 23.36 21.68 12.14 2.16 8.52 8.21 6.02 8.06 2.37 7.35 7.63 2.18 0.00 4.36 3.93 1.53 4.52 0.00 0.00 0.00 0.00 31 E3a_E4b KnownJunction 0 7.11 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 1.02 20.27 13.20 0.00 18.48 24.11 14.27 17.11 0.00 0.00 0.00 2.97 2.76 0.00 32 ER4a ExonRegion 0 4.23 2.03 1.23 0.45 4.46 8.56 3.09 1.15 2.06 2.29 32.86 11.55 6.25 34.65 9.67 13.87 18.71 0.00 0.00 0.00 11.02 2.78 3.92 33 ER4b ExonRegion 0 21.44 1.20 2.65 3.30 16.59 16.78 7.27 2.89 5.58 6.45 79.36 42.73 27.53 107.44 35.50 33.64 43.30 0.00 0.00 0.00 21.57 9.93 6.29 34 E4_Da KnownBoundary 0 45.19 0.00 1.51 8.52 24.96 2.90 8.66 4.39 7.18 3.98 80.70 48.17 19.32 106.89 29.67 43.24 17.67 0.00 0.00 0.00 8.90 14.45 7.51 35 ER4c ExonRegion 0 33.03 1.28 5.34 4.90 17.36 12.77 7.97 5.39 10.87 7.79 91.18 56.63 54.40 120.90 37.70 57.35 50.15 0.00 0.00 0.00 18.35 16.67 10.12 36 E4_Db KnownBoundary 0 32.82 0.00 20.05 5.83 24.53 10.73 12.14 16.92 23.18 4.57 101.82 26.86 66.23 123.49 43.64 56.57 52.36 0.00 0.00 0.00 14.15 27.56 7.68 37 ER4d ExonRegion 0 19.04 2.28 8.16 10.11 15.87 7.95 8.21 8.91 14.88 6.46 96.82 110.16 91.06 112.53 26.90 53.79 41.81 0.00 0.00 0.00 18.58 19.92 13.01 38 E4_Dc KnownBoundary 0 11.34 2.50 14.75 11.12 17.15 12.66 10.07 9.98 13.63 4.35 80.92 124.69 69.64 112.25 31.52 58.02 48.15 0.00 0.00 0.00 14.15 24.68 8.19 39 ER4e ExonRegion 0 22.54 0.81 8.62 7.47 17.32 7.97 8.75 7.91 12.03 6.83 80.27 104.17 69.94 112.73 38.03 44.80 34.41 0.00 0.00 0.00 21.98 15.76 11.45 40 E4_Dd NovelBoundary 0 33.49 0.00 1.12 0.00 15.79 0.00 3.89 4.31 2.98 1.16 18.22 12.15 27.11 61.10 18.91 11.45 4.68 0.00 0.00 0.00 5.31 6.12 10.93 41 E4d_E5c KnownJunction 1 14.15 0.00 4.17 1.80 16.21 2.90 12.63 3.86 7.81 3.33 65.02 88.53 26.30 92.24 40.42 80.41 20.38 0.00 0.00 0.00 34.10 16.84 3.67 42 I4 Intron 0 12.83 0.97 2.17 5.31 13.36 4.80 2.20 3.06 2.84 2.03 30.80 20.19 28.63 27.81 13.67 38.16 16.87 0.00 0.00 0.00 2.88 4.46 4.19 43 I4_AR1 ActiveIntronRegion 1 5.83 0.00 0.00 4.90 0.92 0.63 3.19 1.78 1.90 0.00 19.29 17.20 10.65 23.99 12.80 26.63 12.51 0.00 0.00 0.00 2.28 2.87 4.05 44 I4_SR1 SilentIntronRegion 1 16.58 1.48 3.33 5.55 19.98 7.01 1.69 3.75 3.35 3.11 36.97 21.85 38.24 29.93 14.17 44.39 19.24 0.00 0.00 0.00 3.21 5.31 4.28 45 E5_Aa NovelBoundary 0 23.26 0.00 3.40 1.93 4.24 0.00 0.00 8.54 5.30 1.10 26.32 13.80 6.82 31.08 13.35 36.66 16.55 0.00 0.00 0.00 8.28 7.90 8.71 46 ER5a ExonRegion 0 13.00 0.00 0.00 3.82 10.70 2.63 2.29 2.14 4.52 1.71 21.18 16.65 28.87 15.53 14.42 21.27 13.90 0.00 0.00 0.00 3.04 1.50 3.18 47 E5_Ab KnownBoundary 0 16.97 0.00 0.00 10.92 11.12 0.00 4.15 6.00 9.35 2.66 28.90 31.66 53.73 15.30 13.97 38.11 20.20 0.00 0.00 0.00 2.66 0.00 7.51 48 ER5b ExonRegion 1 11.06 0.77 5.13 10.17 16.79 4.89 4.49 7.37 7.34 1.09 31.68 29.92 40.39 37.51 13.40 31.07 6.92 0.00 0.00 0.00 3.42 10.26 6.68 49 E5_Da KnownBoundary 1 20.67 0.00 1.60 11.89 28.44 10.56 2.03 7.43 6.63 0.00 20.32 60.02 33.60 22.31 16.56 13.76 9.35 0.00 0.00 0.00 0.00 0.00 4.35 50 E5a_E5c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.11 0.00 0.00 0.00 6.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.84 51 ER5c ExonRegion 1 53.34 0.00 2.26 5.57 15.24 3.76 4.55 7.02 8.35 2.56 18.88 35.99 40.11 38.95 13.80 16.09 9.89 0.00 0.00 0.00 2.95 6.69 5.46 52 E5_Ac KnownBoundary 1 85.79 0.00 1.80 1.50 32.17 15.73 0.00 11.21 7.90 4.84 33.06 18.01 26.78 87.70 13.35 23.84 17.58 0.00 0.00 0.00 8.96 2.94 7.43 53 ER5d ExonRegion 0 69.21 1.94 5.74 5.96 20.46 9.32 11.54 9.87 17.00 8.96 109.76 103.99 66.27 143.97 54.77 74.08 46.98 0.00 0.00 0.00 47.95 19.90 18.96 54 E5b_E6a KnownJunction 0 62.90 0.00 12.00 6.29 12.05 2.44 6.67 14.09 8.39 2.44 108.61 78.78 65.74 111.60 46.85 48.79 48.53 0.00 0.00 0.00 48.06 12.12 19.12 55 ER6a ExonRegion 0 58.67 2.78 7.29 7.78 25.78 10.11 12.13 12.99 18.23 7.26 105.65 77.41 46.05 122.47 59.16 60.16 49.67 0.00 0.00 0.00 29.28 17.90 15.66 56 E6_Da KnownBoundary 0 105.13 0.00 10.02 13.58 32.51 2.90 9.89 17.42 11.49 5.51 82.71 83.28 32.30 85.70 92.84 45.54 37.03 0.00 0.00 0.00 5.81 43.90 16.39 57 ER6b ExonRegion 1 49.09 0.24 7.04 9.81 21.30 7.12 11.01 17.18 14.63 11.33 89.06 125.30 20.97 93.15 64.40 55.48 31.91 0.00 0.00 0.00 4.88 32.07 7.37 58 E6_Db KnownBoundary 0 57.42 0.00 4.64 6.59 8.66 13.80 9.63 16.18 19.42 13.83 92.66 87.63 28.89 108.54 108.41 65.97 25.99 0.00 0.00 0.00 3.15 37.05 11.61 59 ER6c ExonRegion 1 27.62 1.62 7.72 6.29 18.51 3.90 9.10 9.24 13.10 8.50 33.99 95.11 57.11 69.14 42.04 30.03 12.75 0.00 0.00 0.00 0.65 17.19 4.19 60 ER6d ExonRegion 0 9.74 0.00 1.47 0.00 3.21 0.00 2.65 0.00 0.25 0.92 6.57 5.20 6.57 11.69 10.44 2.38 3.96 0.00 0.00 0.00 0.00 2.08 0.00 61 ER6e ExonRegion 0 0.00 0.00 0.00 0.00 2.68 0.00 1.32 0.00 0.00 0.00 4.35 0.00 0.00 2.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.00 62 IG23_AR9 ActiveIntergenicRegion 0 29.72 1.23 3.03 4.77 20.56 6.33 6.27 6.90 11.90 6.53 35.31 73.68 44.31 54.12 14.97 24.30 20.72 0.00 0.00 0.00 5.43 9.12 9.31 63 IG23_SR6 SilentIntergenicRegion 0 22.59 0.45 3.79 4.90 17.96 7.60 6.78 7.26 9.20 5.79 54.96 57.62 26.91 72.75 18.08 37.94 25.99 0.00 0.00 0.00 21.61 6.17 7.27 64 IG23_AR8 ActiveIntergenicRegion 0 37.63 0.55 6.70 7.27 11.49 5.44 8.34 12.45 14.24 4.89 60.66 52.87 50.60 94.85 30.20 44.81 31.39 0.00 0.00 0.00 24.27 9.16 11.11 65 IG23_SR5 SilentIntergenicRegion 0 8.78 0.48 2.51 1.21 3.51 2.39 1.47 0.92 1.72 0.61 12.53 19.36 14.23 29.30 12.31 12.44 5.86 0.00 0.00 0.00 9.67 3.47 1.16 66 IG23_AR7 ActiveIntergenicRegion 0 25.38 1.30 6.92 5.47 14.64 4.68 3.09 4.20 7.04 5.84 34.48 26.80 22.07 35.62 20.56 22.48 15.37 0.00 0.00 0.25 7.44 5.80 3.19 67 IG23_SR4 SilentIntergenicRegion 0 6.49 1.82 2.68 2.34 10.52 1.98 3.56 4.39 5.59 3.29 14.29 32.74 26.49 13.83 8.24 4.80 2.06 0.00 0.00 0.00 0.40 2.88 0.35 68 IG23_AR6 ActiveIntergenicRegion 0 12.96 0.51 9.80 2.90 11.04 8.94 14.89 8.64 5.40 3.44 20.05 63.32 23.45 13.81 9.07 2.97 6.60 0.00 0.00 0.00 2.20 0.00 0.00 69 IG23_AR5 ActiveIntergenicRegion 0 9.57 0.00 4.83 3.90 22.52 7.53 8.37 8.43 2.60 2.45 9.55 37.63 42.35 12.44 2.68 6.31 5.74 0.00 0.00 0.00 3.59 1.67 2.30 70 IG23_AR4 ActiveIntergenicRegion 0 23.01 3.78 3.72 3.75 9.60 3.38 2.97 4.21 4.19 3.35 8.92 34.39 27.62 17.34 9.06 4.51 1.96 0.00 0.00 0.00 1.24 5.25 1.49 71 IG23_SR3 SilentIntergenicRegion 0 18.07 8.13 2.45 5.45 10.50 7.34 6.31 5.05 4.66 1.15 17.10 61.28 29.58 13.37 7.59 8.92 0.76 0.00 0.00 0.00 0.00 6.25 5.87 72 IG23_AR3 ActiveIntergenicRegion 0 12.17 8.13 2.45 5.45 10.03 5.65 4.08 3.17 4.94 1.15 14.17 52.31 21.50 8.80 1.93 5.94 0.00 0.00 0.00 0.00 0.00 5.90 5.87 73 IG23_SR2 SilentIntergenicRegion 0 11.86 1.14 0.51 5.22 12.90 2.41 2.36 3.27 2.91 1.88 15.54 31.30 25.38 6.51 3.20 5.83 4.96 0.00 0.00 0.00 1.01 3.70 1.26 74 IG23_AR2 ActiveIntergenicRegion 0 40.36 1.67 1.74 7.83 13.07 3.68 3.81 6.30 3.89 3.25 32.27 38.89 28.28 19.89 17.40 8.20 7.96 0.00 0.00 0.00 3.38 4.96 1.96 75 IG23_AR1 ActiveIntergenicRegion 0 2.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.56 0.00 3.43 0.00 11.27 15.93 2.57 24.98 12.56 0.00 0.00 0.00 0.00 0.94 1.89