Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C17orf78 Gene 0 3.95 12.10 9.01 17.49 14.23 11.26 22.04 8.19 5.55 7.08 1.17 2.15 4.59 1.31 3.36 7.50 3.26 12.66 7.07 27.36 2.66 1.37 4.35 2 300618 Transcript 0 1.24 7.30 4.06 7.37 7.98 5.62 11.14 2.33 0.91 1.56 0.17 1.19 2.99 0.64 1.87 1.21 1.11 1.29 1.93 8.46 1.31 0.00 1.21 3 321564 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 0 1.00 9.60 6.09 3.84 16.43 11.26 24.38 2.42 1.75 6.37 0.00 1.68 7.30 0.00 0.05 2.81 3.06 15.18 12.03 18.10 7.26 1.93 2.77 5 E1_Da NovelBoundary 0 10.08 12.83 24.72 29.93 24.11 10.33 47.74 25.18 2.55 13.83 0.00 0.00 6.82 0.00 5.19 8.72 0.00 29.64 12.71 66.41 16.06 0.00 3.84 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 Ix Intron 0 7.74 14.46 7.62 17.58 17.37 10.11 19.98 10.48 4.74 8.54 0.20 3.16 10.30 1.00 2.07 4.13 3.23 15.77 6.57 27.84 1.82 2.25 4.39 8 Ix_SR1 SilentIntronRegion 0 7.76 14.49 7.63 17.61 17.40 10.13 20.02 10.50 4.75 8.56 0.20 3.17 10.32 1.01 2.08 4.14 3.24 15.80 6.58 27.89 1.82 2.26 4.40 9 E2_Aa NovelBoundary 0 9.63 5.92 5.97 4.99 15.20 7.33 7.60 3.74 4.95 5.72 0.00 18.91 0.00 0.00 0.00 3.93 0.00 4.56 21.27 23.07 0.00 0.00 4.27 10 ER2a ExonRegion 0 0.00 0.00 1.00 0.06 3.14 2.17 10.03 1.67 1.06 3.12 0.00 1.79 2.26 0.19 2.33 1.74 2.01 1.72 0.00 8.78 0.00 0.05 0.20 11 E2_Da NovelBoundary 0 0.00 3.16 1.33 8.66 0.00 5.79 15.19 9.04 7.18 10.64 0.00 0.00 0.00 0.00 0.00 3.59 9.35 13.51 0.00 36.18 0.00 5.94 0.00 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 Ix Intron 0 2.12 7.52 7.67 7.92 26.49 16.32 21.19 7.21 5.34 5.81 0.19 0.00 2.40 0.27 3.11 6.54 2.64 8.63 4.78 22.98 1.98 0.63 3.52 14 Ix_SR1 SilentIntronRegion 0 2.12 7.55 7.70 7.95 26.59 16.39 21.27 7.24 5.36 5.83 0.19 0.00 2.41 0.27 3.12 6.56 2.65 8.67 4.80 23.07 1.99 0.63 3.53 15 E3_Aa NovelBoundary 0 3.56 12.37 13.36 14.55 18.08 4.94 24.33 13.88 17.30 10.21 0.00 0.00 0.00 0.00 12.11 7.95 4.49 16.95 9.22 32.53 9.02 2.94 8.19 16 ER3a ExonRegion 0 1.78 10.99 5.70 9.72 12.78 11.06 14.68 6.34 5.37 5.66 1.20 0.05 1.60 1.39 2.98 8.01 3.46 18.65 5.28 21.67 4.56 1.72 6.63 17 E3_Da NovelBoundary 0 0.00 17.76 18.83 8.59 3.90 17.21 3.93 7.27 3.30 4.78 0.00 0.00 0.00 0.00 4.45 4.36 4.39 11.94 0.00 27.68 5.87 0.00 3.24 18 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E3a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 Ix Intron 0 7.94 18.42 9.51 16.87 22.85 12.65 22.08 9.00 4.92 8.30 0.27 1.67 7.25 1.07 3.34 3.56 3.02 8.43 7.92 22.71 2.17 0.68 4.34 21 Ix_SR1 SilentIntronRegion 0 9.22 15.27 6.19 13.31 23.89 12.38 21.61 8.23 4.35 7.99 0.15 2.43 8.31 0.38 2.81 3.29 2.39 8.14 6.76 19.68 2.09 0.62 4.82 22 Ix_AR1 ActiveIntronRegion 0 5.92 16.89 16.94 22.57 26.10 13.98 27.17 16.29 7.90 7.49 0.00 0.08 3.61 1.29 5.65 2.45 5.99 9.41 4.93 38.19 2.57 1.81 2.42 23 Ix_SR2 SilentIntronRegion 0 5.94 27.35 13.60 22.60 18.38 12.60 20.37 6.73 4.63 9.59 0.75 0.69 6.73 2.70 3.35 4.89 2.87 8.64 12.64 21.41 2.13 0.20 4.26 24 E4_Aa NovelBoundary 0 16.97 47.95 26.02 25.14 25.81 0.00 18.50 6.28 0.00 12.03 0.00 6.15 0.00 2.12 0.00 0.00 4.77 0.00 0.00 17.58 2.78 3.12 3.24 25 ER4a ExonRegion 0 2.77 26.52 11.15 21.13 26.78 18.35 29.79 2.23 1.55 2.23 0.84 1.78 7.10 1.74 3.05 0.00 2.88 1.25 8.33 11.89 3.86 0.02 1.28 26 E4_Da NovelBoundary 0 3.19 76.04 19.63 35.89 4.33 0.00 14.00 8.95 0.00 22.83 0.00 6.15 6.66 2.12 5.19 7.26 4.77 3.52 17.32 24.10 0.00 0.00 4.35 27 E4a_E5a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 Ix Intron 0 5.87 18.70 12.97 16.38 17.73 13.38 20.68 10.05 3.97 10.53 0.89 4.58 3.74 2.64 4.00 8.25 2.20 16.00 9.65 22.77 3.50 0.64 4.52 29 Ix_SR1 SilentIntronRegion 0 5.89 18.73 12.99 16.41 17.76 13.41 20.72 10.07 3.98 10.55 0.90 4.59 3.75 2.65 4.00 8.27 2.21 16.03 9.67 22.81 3.51 0.64 4.53 30 E5_Aa NovelBoundary 0 9.71 11.91 18.24 12.95 30.39 19.65 61.52 5.87 9.69 14.88 4.32 0.00 0.00 0.00 0.00 12.13 0.00 20.85 9.22 33.75 2.47 2.39 4.35 31 ER5a ExonRegion 0 3.45 9.96 7.30 15.73 13.10 9.73 25.89 9.44 3.00 5.58 0.00 4.16 7.88 1.47 6.31 6.04 2.69 5.20 1.30 30.38 2.70 0.00 4.79 32 E5_Da NovelBoundary 0 20.30 36.64 17.03 33.10 41.34 20.05 42.00 21.77 19.53 16.12 0.00 0.00 19.48 2.47 0.00 0.00 3.83 17.49 27.67 44.04 2.47 0.00 16.22 33 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 E6_Aa NovelBoundary 0 6.82 8.35 11.77 14.15 16.04 23.57 12.50 6.37 11.31 9.83 0.00 6.30 6.82 0.00 9.27 14.70 0.00 22.59 7.62 38.16 0.00 6.25 3.33 35 ER6a ExonRegion 0 2.71 5.32 1.62 8.82 2.33 4.73 5.81 4.61 3.99 7.42 0.00 0.00 3.37 0.01 2.16 5.21 8.58 14.21 5.61 22.33 3.84 2.72 6.40 36 E6_Da NovelBoundary 0 3.78 5.92 3.28 11.15 24.45 11.92 18.28 10.93 8.13 11.42 0.00 0.00 0.00 0.00 4.45 4.36 0.00 31.50 13.27 29.34 3.09 0.00 4.10 37 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 Ix Intron 0 5.14 5.23 9.00 19.29 12.42 8.38 12.58 11.77 5.52 10.62 0.55 3.78 5.04 0.66 6.00 6.16 4.01 10.31 12.29 25.84 1.57 1.04 2.10 39 Ix_SR1 SilentIntronRegion 0 5.15 5.24 9.03 19.35 12.46 8.41 12.61 11.80 5.54 10.65 0.55 3.79 5.06 0.66 6.01 6.17 4.02 10.34 12.32 25.91 1.58 1.04 2.10 40 E7_Aa NovelBoundary 0 3.26 5.92 5.03 33.76 11.80 19.25 20.58 13.47 9.84 5.08 2.68 0.00 0.00 0.00 0.00 4.36 0.00 9.70 18.26 38.67 0.00 0.00 8.11 41 ER7a ExonRegion 0 5.40 13.01 11.52 22.87 15.32 12.17 24.97 10.65 7.26 8.47 1.68 2.75 4.67 1.60 3.68 9.58 2.86 13.87 8.27 33.05 1.70 1.50 4.38