Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RHBDL3 Gene 0 2.66 9.72 70.71 4.80 8.75 27.57 5.14 41.04 7.63 3.55 1.23 0.28 0.48 3.97 4.77 4.81 5.13 25.03 0.84 4.45 3.30 8.34 8.29 2 269051 Transcript 0 2.99 4.75 55.77 2.25 5.73 18.49 3.05 29.49 6.04 1.98 3.42 0.00 0.00 6.48 1.03 5.96 6.05 29.18 0.54 5.31 0.00 4.61 1.91 3 431505 Transcript 0 0.00 0.00 1.36 4.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 4 IG40_AR5 ActiveIntergenicRegion 0 10.40 24.37 12.16 14.35 14.80 6.95 8.81 9.76 10.17 8.40 0.00 2.19 6.19 0.71 2.18 2.13 3.04 7.15 1.63 5.01 1.13 0.00 5.71 5 ER1a ExonRegion 0 0.00 3.50 5.22 0.28 0.00 2.83 0.54 2.12 1.66 0.91 0.00 0.00 0.00 0.00 0.84 2.43 0.00 3.71 0.00 0.87 0.00 2.05 0.00 6 E2a_E3a KnownJunction 0 0.00 3.03 19.04 1.80 0.00 19.25 0.00 10.72 1.77 1.61 0.00 0.00 0.00 4.94 0.00 0.00 0.00 6.96 0.00 0.00 2.41 0.00 0.00 7 ER2a ExonRegion 0 0.09 8.64 7.30 1.36 0.00 12.76 0.00 7.49 1.24 1.43 0.00 0.00 0.00 3.05 0.00 0.00 0.00 6.01 0.00 0.00 0.00 2.60 0.00 8 I2 Intron 0 0.72 1.79 17.41 1.03 1.64 2.34 2.12 5.74 1.09 0.73 0.22 0.40 0.51 0.82 0.95 1.43 1.70 8.06 0.33 1.55 0.48 1.15 2.69 9 I2_SR1 SilentIntronRegion 0 1.10 1.21 26.00 1.21 2.09 1.77 2.66 5.94 1.42 0.76 0.00 0.00 0.41 1.08 1.38 2.21 1.81 7.31 0.35 2.16 0.25 0.51 3.91 10 I2_AR1 ActiveIntronRegion 0 0.28 4.56 25.67 1.61 3.17 1.21 2.79 7.08 1.26 0.45 0.00 0.00 0.00 0.35 1.71 0.00 0.55 6.52 0.00 3.54 0.29 1.75 3.15 11 I2_SR2 SilentIntronRegion 0 1.39 3.77 26.87 1.22 2.74 2.73 3.40 10.32 1.52 0.99 0.35 1.67 1.18 0.92 1.07 2.16 2.45 10.74 0.67 1.51 0.58 1.64 3.18 12 I2_AR2 ActiveIntronRegion 0 0.00 1.25 22.71 2.69 1.54 2.48 2.12 6.80 1.22 0.98 0.00 0.00 0.56 1.47 0.89 1.00 3.19 11.06 0.46 1.85 1.58 1.82 2.87 13 I2_SR3 SilentIntronRegion 0 0.34 2.04 14.47 1.27 1.58 1.60 1.86 4.20 1.23 0.82 0.00 0.00 0.13 0.99 0.80 1.78 2.21 7.63 0.64 1.78 0.59 0.76 1.31 14 I2_AR5 ActiveIntronRegion 0 0.38 0.98 22.20 1.26 0.96 3.17 1.49 7.93 0.66 0.31 0.69 0.00 0.00 0.60 1.83 0.53 1.18 11.81 0.00 2.62 0.00 1.41 2.52 15 E3_Aa NovelBoundary 0 0.00 0.00 13.07 0.00 0.00 8.63 0.00 3.53 0.00 0.00 0.00 0.00 0.00 0.00 5.69 0.00 0.00 16.17 0.00 0.00 0.00 2.69 0.00 16 ER3a ExonRegion 0 1.34 3.27 28.88 2.37 0.00 6.01 0.96 12.99 5.47 2.79 0.97 0.00 1.50 2.26 0.66 1.08 5.65 16.10 1.02 4.60 0.71 3.34 2.27 17 E3a_E4a KnownJunction 0 0.00 8.81 38.59 1.76 0.00 7.55 3.97 7.06 1.27 4.46 2.68 0.00 0.00 0.00 0.00 3.25 8.23 43.65 0.00 2.81 0.00 5.39 4.35 18 I3_AR1 ActiveIntronRegion 0 0.00 0.69 19.35 0.89 1.06 3.81 1.25 4.31 0.90 0.39 0.00 0.00 0.00 0.33 0.90 2.39 0.65 9.15 0.32 2.21 0.44 0.62 2.33 19 ER4a ExonRegion 0 0.96 7.92 51.60 3.28 3.69 22.36 4.64 23.95 4.36 4.40 1.07 0.00 0.88 7.95 1.12 5.77 9.83 33.88 0.72 4.04 4.32 8.75 12.43 20 E4a_E5a KnownJunction 0 0.00 17.63 39.15 3.06 0.00 20.95 6.58 30.76 5.79 1.16 0.00 0.00 0.00 4.77 0.00 3.93 8.04 16.58 0.00 0.00 5.31 8.70 8.45 21 I4 Intron 0 1.34 4.13 16.65 1.74 2.42 2.73 2.63 7.56 1.08 1.00 0.09 0.16 0.35 0.66 0.37 1.88 1.49 5.06 0.14 0.86 0.10 0.94 2.65 22 I4_AR1 ActiveIntronRegion 0 1.45 1.68 20.08 2.79 2.94 3.28 3.82 9.91 1.27 1.17 0.00 0.00 0.00 0.53 0.00 1.63 2.72 10.74 0.44 2.05 0.30 0.57 3.63 23 I4_SR1 SilentIntronRegion 0 1.29 5.35 15.03 1.23 2.17 2.47 2.05 6.43 0.99 0.92 0.13 0.24 0.52 0.72 0.55 2.01 0.89 2.30 0.00 0.29 0.00 1.12 2.18 24 E5_Aa NovelBoundary 0 0.00 6.64 35.54 3.53 3.14 0.00 1.68 13.84 5.09 4.92 0.00 0.00 0.00 0.00 0.00 6.75 4.11 7.05 0.00 0.00 0.00 0.00 0.00 25 ER5a ExonRegion 0 3.28 11.29 82.97 12.47 7.90 23.51 7.74 41.27 10.17 3.71 2.66 0.00 0.85 7.73 5.02 7.34 5.12 37.50 1.09 2.37 4.57 10.73 12.18 26 E5a_E6a KnownJunction 0 3.41 14.21 76.52 9.56 3.90 41.17 12.23 45.67 11.26 5.61 0.00 0.00 6.82 14.48 0.00 3.42 0.00 42.78 0.00 8.12 2.59 7.04 23.22 27 E6_Aa NovelBoundary 0 0.00 0.00 5.68 0.00 0.00 0.00 0.00 0.00 1.79 1.05 0.00 0.00 0.00 0.00 14.96 0.00 0.00 4.15 0.00 0.00 0.00 0.00 0.00 28 ER6a ExonRegion 0 1.48 6.42 60.03 7.77 8.45 22.09 3.89 36.39 9.04 2.71 3.49 1.38 0.62 5.73 6.14 5.05 2.89 26.03 0.00 5.69 3.28 9.31 11.69 29 E6a_E7a KnownJunction 0 0.00 3.35 53.64 1.66 3.90 22.15 2.08 28.51 4.80 0.00 2.58 0.00 0.00 2.35 0.00 4.02 9.35 28.44 0.00 3.13 0.00 3.12 0.00 30 E6a_E8a KnownJunction 0 0.00 0.00 1.36 4.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 31 ER7a ExonRegion 0 1.84 8.19 54.72 3.58 5.64 19.01 4.82 29.25 10.32 2.65 2.85 0.00 0.00 7.61 3.10 6.09 4.67 24.53 1.61 6.28 0.00 5.20 1.45 32 E7a_E8a KnownJunction 0 7.11 2.70 58.96 1.50 7.64 14.31 2.25 30.72 3.01 3.30 4.84 0.00 0.00 9.48 0.00 7.78 4.11 34.57 0.00 6.52 0.00 5.51 4.27 33 E8_Aa NovelBoundary 0 0.00 0.00 19.63 1.76 0.00 11.64 0.00 11.75 0.00 0.00 0.00 0.00 0.00 9.65 4.45 0.00 0.00 10.78 0.00 0.00 0.00 0.00 0.00 34 ER8a ExonRegion 0 6.63 7.30 60.44 5.50 8.47 25.97 5.73 28.56 4.96 2.88 4.91 0.00 3.23 7.80 14.27 6.77 8.33 32.81 0.00 2.20 0.00 7.69 5.87 35 E8_Da NovelBoundary 0 0.00 0.00 5.50 0.00 0.00 7.67 2.03 5.79 0.00 0.00 0.00 0.00 6.82 2.47 15.58 3.33 13.46 0.00 0.00 0.00 0.00 0.00 0.00 36 E8a_E9a KnownJunction 0 10.00 9.87 72.91 4.83 3.74 23.79 10.07 34.05 8.07 3.22 0.00 0.00 0.00 4.94 9.02 7.60 4.11 36.48 0.00 5.18 0.00 2.45 7.26 37 ER9a ExonRegion 0 2.90 10.45 76.73 4.79 9.92 30.33 5.47 45.47 8.00 3.69 1.07 0.32 0.38 3.58 5.16 4.85 5.06 25.07 0.88 4.65 3.58 8.75 8.60 38 IG41 Intergenic 0 10.36 53.02 57.75 34.82 65.62 24.44 33.70 32.64 31.09 28.52 6.42 9.98 8.98 10.99 12.15 3.64 3.74 16.71 26.99 27.82 2.17 5.63 3.49 39 IG41_AR2 ActiveIntergenicRegion 0 2.33 9.70 22.22 3.73 9.82 2.69 6.90 18.04 13.00 13.80 5.67 2.62 4.29 5.54 9.64 1.09 0.00 7.09 7.01 14.83 2.43 5.35 2.15 40 IG41_SR2 SilentIntergenicRegion 0 22.34 102.38 119.50 72.83 134.27 48.70 67.81 63.73 62.41 58.48 11.96 18.54 15.68 21.34 23.01 6.81 6.57 32.78 51.81 51.08 3.81 10.18 6.61 41 IG41_AR3 ActiveIntergenicRegion 0 9.08 114.86 62.67 47.43 103.30 41.97 53.95 52.79 46.93 37.07 14.28 26.40 24.92 20.47 21.15 8.50 12.59 30.02 51.62 69.48 5.78 12.91 6.30