Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 STARD3 Gene 0 80.42 32.34 124.67 123.67 65.45 108.96 62.01 78.96 77.07 108.28 80.96 27.19 31.24 87.30 94.90 75.10 62.57 83.34 64.51 69.32 86.86 67.89 71.07 2 336308 Transcript 0 23.16 5.28 6.60 4.10 12.43 70.41 22.39 1.56 7.54 9.73 9.24 0.00 0.00 11.46 21.42 25.86 11.93 11.69 16.32 8.24 13.24 6.87 21.88 3 394250 Transcript 0 0.00 3.16 0.00 3.36 0.00 0.00 2.16 10.10 5.96 7.63 4.95 0.00 0.00 2.41 4.45 3.93 0.00 0.00 9.32 3.07 2.97 8.02 0.00 4 488876 Transcript 0 0.00 0.00 0.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.10 5 484773 Transcript 0 0.00 0.00 0.35 0.63 1.12 0.30 0.00 0.00 0.62 1.29 0.00 0.00 0.00 0.00 0.24 1.25 1.96 0.60 0.00 1.52 2.28 0.00 0.00 6 443521 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 460894 Transcript 0 10.74 1.19 3.80 2.88 6.10 5.23 7.70 4.80 4.06 4.08 5.44 0.41 0.63 6.51 4.72 7.81 8.30 4.15 4.39 2.84 5.50 3.13 2.12 8 481171 Transcript 0 33.12 9.37 39.50 39.69 19.80 32.50 18.10 23.58 29.58 33.30 13.18 3.52 7.82 18.75 20.72 21.56 15.41 25.82 17.95 19.90 20.14 12.67 9.40 9 471896 Transcript 0 3.36 1.74 4.53 3.61 4.29 4.92 2.65 4.23 3.59 4.44 4.30 0.89 1.41 3.89 2.35 5.43 2.88 3.55 2.93 4.49 6.54 3.17 3.12 10 ER1a ExonRegion 0 23.16 5.28 6.60 4.10 12.43 70.41 22.39 1.56 7.54 9.73 9.24 0.00 0.00 11.46 21.42 25.86 11.93 11.69 16.32 8.24 13.24 6.87 21.88 11 E1_Ab KnownBoundary 0 159.88 29.40 30.37 26.80 82.26 418.45 140.57 17.79 35.39 36.64 51.64 0.00 0.00 87.00 173.06 128.60 94.06 120.34 67.95 52.48 68.88 46.60 178.24 12 ER1b ExonRegion 1 128.00 29.28 54.66 30.44 103.89 339.31 152.80 41.29 33.21 57.47 77.68 0.00 4.76 60.22 128.44 109.07 87.19 61.80 104.71 48.80 93.61 57.58 148.46 13 E1a_E3a KnownJunction 0 78.61 8.95 60.85 56.30 77.59 136.46 93.45 62.88 41.90 90.36 48.49 0.00 6.82 53.45 53.03 110.31 52.83 109.15 71.72 50.05 47.45 62.70 116.86 14 ER2a ExonRegion 0 0.00 0.00 0.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.10 15 ER2b ExonRegion 0 0.00 0.00 1.23 0.58 2.29 0.52 0.00 0.00 0.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.67 1.67 0.00 0.20 0.00 0.00 2.94 16 ER2c ExonRegion 0 0.00 0.00 1.23 1.36 4.30 1.83 0.00 0.00 1.24 0.49 0.06 0.00 0.00 0.00 2.64 1.80 9.20 2.24 0.00 6.32 0.47 0.00 2.22 17 E2_Da KnownBoundary 0 0.00 2.76 1.54 2.06 4.24 2.44 0.00 0.00 1.79 3.92 0.00 0.00 0.00 2.24 4.45 4.36 12.34 4.27 0.00 9.33 2.35 0.00 0.00 18 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER2d ExonRegion 0 0.00 0.00 0.70 1.25 2.24 0.59 0.00 0.00 1.24 1.15 0.00 0.00 0.00 0.00 0.47 2.49 3.93 1.20 0.00 3.05 2.20 0.00 0.00 20 E2b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.35 0.00 0.00 21 E3_Ab NovelBoundary 0 9.63 0.00 21.58 26.70 4.16 19.59 14.09 36.35 23.00 54.48 24.32 6.15 0.00 2.12 8.90 17.86 20.10 62.10 20.99 14.76 17.17 23.94 15.19 22 ER3a ExonRegion 0 34.92 5.08 45.22 31.21 39.60 85.73 51.04 51.85 29.15 73.06 34.70 2.81 9.38 29.32 27.71 65.68 40.11 74.56 54.47 39.04 32.28 47.40 78.85 23 ER3b ExonRegion 0 31.25 19.16 110.33 97.66 53.09 106.98 34.75 77.37 82.45 135.77 103.08 21.21 30.86 96.21 116.41 93.73 100.91 107.35 89.14 95.11 132.44 75.63 104.10 24 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E3a_E4b KnownJunction 0 64.97 85.71 207.80 208.20 240.66 447.53 197.67 109.63 129.31 225.88 145.19 68.57 48.37 139.62 221.28 151.58 93.13 148.65 118.03 150.65 147.40 115.92 106.19 26 E4_Aa NovelBoundary 0 35.34 3.22 13.33 8.56 3.31 10.85 6.27 13.60 14.12 11.26 7.74 0.00 0.00 9.65 13.23 14.78 0.00 9.16 13.65 5.62 8.59 2.39 8.28 27 ER4a ExonRegion 0 21.49 2.38 7.60 5.76 12.20 10.46 15.40 9.61 8.12 8.15 10.88 0.82 1.27 13.02 9.44 15.61 16.59 8.31 8.78 5.67 11.00 6.27 4.23 28 E4_Ab KnownBoundary 0 25.63 0.00 16.26 10.59 10.78 23.00 24.69 13.35 12.88 15.50 4.63 5.70 6.82 29.20 15.45 30.59 16.55 15.75 12.14 5.75 2.53 11.14 11.78 29 ER4b ExonRegion 0 111.93 75.90 270.87 217.50 173.58 450.50 264.02 166.27 158.30 257.49 234.99 82.09 68.52 199.20 199.96 149.57 187.08 167.09 180.90 186.10 233.59 197.80 167.88 30 E4a_E5a KnownJunction 0 96.68 86.10 306.20 217.99 146.60 324.02 201.65 174.15 162.70 269.53 276.91 138.04 119.47 164.22 152.54 133.73 201.40 170.25 178.26 180.25 284.30 163.43 175.42 31 ER5a ExonRegion 0 92.90 69.62 246.53 185.17 113.23 216.39 123.83 134.23 155.27 229.80 232.20 90.24 100.47 180.79 160.26 134.92 167.74 190.42 141.25 150.67 217.94 117.28 164.14 32 E5_Da KnownBoundary 0 126.47 79.53 267.79 226.94 131.15 162.24 77.15 127.33 178.88 234.88 163.20 87.63 58.28 172.23 112.12 160.13 127.26 211.58 108.61 135.63 172.54 85.11 172.43 33 ER5b ExonRegion 0 57.62 49.37 202.19 195.88 75.12 99.67 42.47 109.50 136.76 213.09 142.89 94.60 58.04 147.79 103.43 135.75 102.41 193.64 71.67 136.01 139.60 127.72 131.05 34 E5_Db NovelBoundary 1 3.26 3.35 7.78 10.99 12.90 7.67 11.35 7.35 6.19 5.16 0.00 19.66 0.00 2.47 10.38 8.72 9.54 15.17 0.00 3.20 2.59 3.12 4.18 35 E5b_E6b KnownJunction 0 46.82 42.62 208.39 220.95 57.13 79.67 34.31 108.93 109.43 190.08 139.93 42.76 31.49 134.03 87.27 143.38 75.92 184.84 50.17 151.61 141.78 153.70 131.03 36 E5b_E6c KnownJunction 0 0.00 3.16 0.00 3.36 0.00 0.00 2.16 10.10 5.96 7.63 4.95 0.00 0.00 2.41 4.45 3.93 0.00 0.00 9.32 3.07 2.97 8.02 0.00 37 ER6a ExonRegion 0 7.22 1.52 8.71 4.69 11.85 11.79 4.03 4.06 4.51 3.93 7.55 1.51 0.74 10.39 14.23 3.21 6.71 8.39 3.24 6.05 7.94 6.05 4.61 38 E6_Ab KnownBoundary 0 26.52 3.35 10.56 4.86 32.26 5.79 9.19 5.22 2.58 1.37 2.26 6.15 0.00 13.54 0.00 3.59 8.88 10.16 3.95 10.74 11.61 8.08 0.00 39 ER6b ExonRegion 0 96.28 49.61 243.39 253.60 85.37 138.37 76.19 155.85 133.35 253.77 207.37 78.67 92.38 201.61 180.92 215.73 159.94 260.53 150.19 160.86 179.87 201.20 178.36 40 E6_Da KnownBoundary 1 32.67 25.19 85.72 116.04 29.29 64.51 48.80 41.85 37.79 52.09 23.53 13.05 62.50 20.66 30.04 21.79 16.55 28.89 62.68 11.31 23.54 33.25 16.30 41 E6a_E6c KnownJunction 0 119.72 21.84 232.31 197.88 92.95 137.53 98.79 156.90 129.95 235.96 219.00 73.82 66.07 221.79 180.98 231.05 154.84 234.96 210.26 150.27 184.53 268.75 197.36 42 ER6c ExonRegion 0 57.62 18.90 82.69 103.65 37.81 75.97 39.84 38.18 55.33 58.52 26.54 10.09 11.81 32.66 31.25 38.75 14.27 46.91 55.45 27.41 30.67 25.57 32.95 43 E6_Ac KnownBoundary 0 64.75 39.60 82.61 97.06 71.82 92.45 24.82 29.90 49.02 62.48 14.79 7.05 37.17 46.91 32.26 45.12 21.88 50.49 25.88 33.17 33.92 17.15 32.52 44 ER6d ExonRegion 0 160.60 61.25 284.99 240.02 177.08 281.29 120.71 184.49 167.64 285.71 225.03 84.85 81.29 226.34 173.98 177.16 161.94 212.10 161.17 150.92 213.82 156.96 170.65 45 E6_Db KnownBoundary 0 50.01 12.43 50.59 100.42 55.09 72.46 39.44 50.77 69.36 57.16 30.17 0.00 6.66 43.20 34.86 39.65 13.18 58.16 27.95 36.82 29.84 32.27 36.36 46 E6b_E6d KnownJunction 1 147.29 49.07 169.07 158.45 130.98 165.98 119.86 100.10 93.17 175.84 180.57 49.07 60.71 183.94 69.35 145.26 108.74 186.25 56.94 106.42 149.50 114.94 150.58 47 E6b_E7b NovelJunction 0 3.26 0.00 15.40 13.62 16.13 10.56 12.85 13.84 12.24 11.79 13.06 0.00 6.49 19.37 22.99 24.87 8.79 6.80 3.95 9.08 11.12 5.57 14.51 48 ER6e ExonRegion 0 57.44 13.65 71.09 82.98 46.16 65.74 40.29 50.89 60.13 71.64 33.21 4.33 13.69 36.49 35.05 28.17 20.98 55.53 47.80 41.17 43.43 29.83 34.09 49 E6_Dc KnownBoundary 0 67.64 15.26 59.16 59.97 15.45 63.32 16.03 33.56 51.65 54.91 17.21 0.00 26.46 31.61 35.48 11.45 43.10 42.53 26.45 41.87 26.93 28.90 14.68 50 E6_Ad KnownBoundary 1 169.51 27.10 66.70 89.77 69.69 74.05 59.84 51.14 59.81 50.82 28.22 5.85 8.28 28.78 39.43 61.86 13.93 43.69 67.39 27.74 45.04 17.51 23.73 51 ER6f ExonRegion 0 77.14 20.27 89.16 99.82 39.58 71.96 37.66 49.53 74.19 80.28 27.79 6.57 20.86 33.77 37.82 48.37 33.24 55.31 45.58 42.48 49.24 29.24 19.34 52 ER6g ExonRegion 0 183.03 81.75 247.49 252.61 149.77 225.69 144.64 149.64 188.54 266.88 189.42 71.76 55.11 191.97 151.66 183.08 117.35 302.06 160.54 110.11 192.88 148.03 151.97 53 E6_Dd KnownBoundary 0 246.86 135.96 232.25 254.88 195.76 339.92 176.21 152.06 191.29 276.60 206.53 54.32 45.45 164.58 187.03 241.22 170.17 335.40 238.69 123.36 206.58 208.81 177.81 54 ER6h ExonRegion 0 185.01 114.30 216.74 224.29 183.52 343.52 172.48 166.89 176.66 249.14 230.48 54.79 60.49 235.44 175.18 187.09 200.33 244.83 200.02 144.28 220.37 204.44 193.97 55 E6e_E7b KnownJunction 0 249.82 108.73 228.79 227.58 315.11 356.04 207.52 185.82 179.92 234.77 174.15 71.12 61.52 236.10 140.92 139.88 174.29 130.12 170.83 160.43 238.83 178.31 163.90 56 ER7a ExonRegion 0 3.36 1.74 4.53 3.61 4.29 4.92 2.65 4.23 3.59 4.44 4.30 0.89 1.41 3.89 2.35 5.43 2.88 3.55 2.93 4.49 6.54 3.17 3.12 57 E7_Ab KnownBoundary 0 0.00 0.00 1.77 0.00 0.00 0.00 0.00 2.55 1.65 1.64 2.63 0.00 0.00 0.00 0.00 4.19 0.00 2.57 0.00 9.33 3.09 0.00 0.00 58 ER7b ExonRegion 0 202.22 92.62 279.72 247.45 203.55 298.74 157.53 190.35 171.95 247.36 210.93 80.21 79.39 217.16 180.09 113.32 148.84 156.19 128.69 148.94 253.35 169.14 188.05 59 E7a_E8a KnownJunction 0 233.08 84.13 311.31 273.52 123.68 223.51 156.42 184.01 151.04 226.98 171.41 74.72 81.65 165.99 203.23 120.57 147.83 148.98 113.23 155.51 236.11 213.89 149.47 60 ER8a ExonRegion 0 175.58 89.00 304.02 403.46 136.66 289.15 138.57 193.07 195.44 261.01 172.09 85.19 96.62 206.53 196.75 149.37 153.40 175.97 165.54 172.80 218.52 196.97 170.74 61 E8_Da KnownBoundary 0 55.71 16.64 46.27 65.99 46.86 13.91 36.66 61.78 55.21 65.49 44.33 29.86 14.61 48.80 49.69 56.31 46.75 54.88 22.21 46.92 28.91 57.99 25.69 62 E8a_E8b KnownJunction 0 247.23 128.33 330.89 437.51 257.47 426.52 195.91 214.45 190.48 255.40 240.90 120.04 119.96 219.08 260.71 142.01 209.44 151.43 184.38 196.67 237.47 216.15 249.77 63 ER8b ExonRegion 0 45.39 11.94 41.64 55.57 34.15 25.64 29.96 39.42 31.95 50.60 39.78 18.26 13.67 33.48 29.43 37.55 32.36 28.61 29.09 27.23 31.85 21.42 23.07 64 E8_Ab KnownBoundary 0 90.16 12.76 62.21 78.18 38.62 52.36 35.37 37.54 34.52 32.96 37.59 6.30 19.64 38.85 18.30 29.56 20.20 34.24 22.31 24.93 35.89 13.72 31.50 65 ER8c ExonRegion 0 223.87 103.61 364.43 405.59 201.89 311.33 170.64 201.84 196.48 246.09 258.73 83.31 84.50 240.84 243.38 195.25 216.90 202.24 181.67 212.59 286.98 202.74 249.95 66 E8_Db KnownBoundary 0 20.08 9.67 24.16 39.52 3.31 19.82 1.90 11.17 10.53 25.95 21.37 6.15 0.00 11.54 13.35 8.12 8.98 28.98 12.89 8.63 19.83 11.02 20.91 67 E8b_E8c KnownJunction 0 184.40 80.18 384.46 362.36 130.22 229.81 164.86 179.25 162.87 219.84 146.62 94.23 113.95 215.26 255.02 214.47 115.57 190.60 86.78 245.06 234.51 149.47 195.82 68 ER8d ExonRegion 0 26.19 6.11 34.25 24.14 9.92 8.22 22.89 16.49 20.54 22.94 16.39 4.41 8.31 23.09 23.52 15.01 15.25 24.03 8.37 9.20 19.35 8.32 12.36 69 E8_Ac KnownBoundary 0 31.04 12.63 23.89 37.22 7.30 5.34 3.93 13.39 21.79 19.53 16.32 6.15 13.47 29.02 13.97 24.52 11.78 38.47 4.80 5.82 8.34 11.27 21.51 70 ER8e ExonRegion 0 182.53 72.03 344.14 428.56 149.03 234.13 142.11 201.90 189.43 235.54 191.80 99.67 142.43 219.51 272.11 211.87 152.88 209.26 156.85 181.34 222.57 187.78 189.27 71 E8c_E9a KnownJunction 0 299.16 95.05 374.53 623.73 224.96 399.15 243.60 243.24 216.69 274.15 267.01 85.08 86.84 235.27 300.39 218.23 193.36 243.12 231.63 231.32 249.27 214.87 197.53 72 ER9a ExonRegion 0 150.19 66.50 293.57 343.36 130.48 222.88 139.13 169.09 170.11 209.61 176.96 83.07 65.66 206.43 248.06 174.98 140.37 180.06 158.67 176.17 171.31 178.66 166.47 73 E9a_E10a KnownJunction 0 228.71 83.27 304.87 286.31 102.80 204.20 138.36 162.04 158.62 237.35 178.31 62.87 97.88 180.82 204.59 182.69 130.90 164.16 98.45 180.95 171.25 123.75 150.58 74 ER10a ExonRegion 0 202.30 70.15 298.15 297.47 111.59 224.30 129.87 172.42 164.76 222.66 170.19 66.43 101.84 202.67 228.48 194.35 122.79 200.68 140.55 154.16 187.71 158.65 150.30 75 E10a_E11a KnownJunction 0 196.85 70.58 391.09 336.35 113.75 254.91 166.41 187.87 196.55 216.08 118.87 74.72 82.30 141.21 142.28 135.35 99.58 227.29 104.76 155.13 131.71 144.76 123.95 76 ER11a ExonRegion 0 241.15 97.07 292.11 263.56 134.87 239.41 156.78 166.61 163.73 225.67 162.38 43.62 79.63 185.01 193.00 151.48 106.44 189.87 110.98 123.49 148.16 135.32 137.93 77 E11_Da KnownBoundary 0 30.08 2.57 35.04 11.92 19.52 22.09 12.23 26.66 8.10 13.40 7.11 0.00 0.00 24.43 25.96 28.54 8.60 13.72 8.75 15.21 11.61 2.33 8.19 78 E11a_E11b KnownJunction 0 281.61 69.86 255.17 230.44 154.67 234.01 110.27 135.79 128.04 205.39 130.19 55.52 48.86 163.22 184.56 150.64 110.43 168.09 65.51 104.38 153.02 142.74 138.63 79 ER11b ExonRegion 0 14.99 6.34 20.62 14.55 7.97 13.75 12.61 17.15 10.03 15.69 4.20 2.48 1.87 12.08 10.11 13.08 6.28 13.76 5.03 11.17 3.24 2.70 4.24 80 E11_Ab KnownBoundary 0 16.74 3.22 26.17 27.14 12.99 17.77 6.32 24.60 16.84 17.25 0.00 0.00 0.00 9.54 4.45 7.18 3.83 10.28 4.24 14.57 9.08 3.12 7.09 81 ER11c ExonRegion 0 119.28 47.81 198.04 163.42 88.99 120.50 69.70 122.74 112.78 153.20 105.76 21.68 31.92 128.78 180.18 92.71 68.12 98.61 57.44 101.02 121.52 95.45 86.32 82 E11_Db KnownBoundary 0 212.70 68.54 130.39 99.99 157.05 119.19 85.72 128.03 83.27 132.70 53.22 50.27 26.46 114.78 139.19 58.87 64.80 42.49 82.54 33.88 64.56 58.36 51.47 83 ER11d ExonRegion 0 103.59 32.25 53.88 47.78 74.08 81.11 47.55 60.55 37.72 59.08 27.39 29.19 14.20 105.01 109.17 37.96 42.25 22.81 57.34 28.39 40.04 42.50 26.51 84 ER11e ExonRegion 0 22.29 4.34 12.50 5.36 6.07 23.96 8.74 13.48 7.99 9.94 6.57 3.75 0.63 18.19 20.89 5.15 7.04 2.71 16.14 8.65 5.73 11.25 3.13