Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MRM1 Gene 0 15.55 8.76 32.78 10.54 11.30 27.70 4.79 9.32 7.78 10.34 59.46 9.73 11.50 81.44 97.68 45.05 39.29 10.50 13.02 141.76 19.46 7.65 12.73 2 250156 Transcript 0 18.17 12.08 31.85 14.21 19.85 32.77 5.96 12.57 6.98 14.40 69.01 11.40 13.76 95.86 108.94 52.09 41.73 8.00 18.67 135.57 22.23 12.60 15.89 3 IG7 Intergenic 0 0.14 0.27 0.61 0.00 0.36 0.86 1.06 1.20 0.00 2.28 1.80 0.48 0.26 0.24 0.27 0.40 0.00 0.00 1.27 81.42 0.73 0.00 0.39 4 IG7_SR1 SilentIntergenicRegion 0 0.00 0.27 1.21 0.00 0.36 0.59 1.22 1.17 0.00 1.51 3.08 0.95 0.51 0.30 0.54 0.03 0.00 0.00 1.27 91.05 0.48 0.00 0.78 5 IG7_AR1 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 5.50 3.97 3.46 0.00 4.21 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.00 2.97 124.11 2.20 0.00 0.00 6 IG7_SR2 SilentIntergenicRegion 0 0.30 0.28 0.00 0.00 0.37 0.95 0.78 1.14 0.00 3.02 0.54 0.00 0.00 0.19 0.00 0.68 0.00 0.00 1.22 69.94 0.95 0.00 0.00 7 ER1a ExonRegion 0 7.96 6.99 27.25 7.58 6.48 22.93 4.09 7.66 6.95 9.11 51.46 7.48 7.75 63.57 69.93 37.61 34.87 11.87 12.45 124.64 20.52 4.34 8.01 8 E1_Da NovelBoundary 0 9.63 9.08 11.41 6.76 0.00 9.60 2.25 3.70 0.00 8.54 14.27 7.65 6.17 31.02 51.67 24.01 0.00 4.15 7.53 108.47 2.41 2.33 15.19 9 E1a_E2a KnownJunction 0 13.41 27.23 32.67 20.11 33.36 50.14 10.33 15.12 10.56 13.91 91.08 36.01 26.30 109.95 47.35 54.00 43.38 6.18 26.17 122.27 33.61 14.33 15.45 10 I1 Intron 0 5.40 2.07 4.66 5.18 5.46 12.17 3.38 4.60 3.29 2.18 7.39 0.00 2.95 21.58 19.50 19.71 10.10 9.83 4.87 86.81 2.81 0.53 3.74 11 I1_SR1 SilentIntronRegion 0 5.51 2.12 4.75 5.28 5.53 12.42 3.44 4.69 3.35 2.22 7.54 0.00 3.02 21.98 19.86 20.02 10.31 10.03 4.97 88.48 2.87 0.54 3.82 12 E2_Aa NovelBoundary 0 26.67 17.50 5.62 1.96 0.00 19.65 12.06 8.67 4.22 5.26 12.00 0.00 0.00 20.95 42.90 19.82 17.11 3.44 12.99 122.53 0.00 2.88 11.18 13 ER2a ExonRegion 0 20.02 12.76 33.85 18.22 23.57 36.54 4.38 12.52 6.35 14.30 74.07 13.40 13.82 127.68 121.54 55.21 53.90 12.97 23.45 183.34 34.60 15.32 20.62 14 E2_Da NovelBoundary 0 29.12 0.00 2.34 1.76 0.00 7.44 0.00 1.64 1.13 2.79 11.58 6.15 0.00 12.13 17.80 12.22 23.47 5.97 0.00 66.03 5.68 0.00 7.09 15 E2a_E3a KnownJunction 0 16.08 11.71 24.30 5.96 37.35 8.18 8.30 15.16 4.28 16.17 78.13 0.00 7.63 118.55 135.86 42.64 27.58 1.70 16.57 94.53 15.57 28.84 26.63 16 I2 Intron 0 8.26 6.17 8.03 4.40 7.13 6.93 5.99 3.03 3.54 3.60 10.06 13.87 11.40 20.12 20.77 18.97 11.05 5.23 6.12 95.45 4.92 2.71 6.37 17 I2_SR1 SilentIntronRegion 0 8.28 6.19 8.05 4.42 7.15 6.95 6.00 3.04 3.54 3.61 10.08 13.90 11.43 20.16 20.82 19.01 11.07 5.25 6.13 95.68 4.93 2.72 6.38 18 E3_Aa NovelBoundary 0 7.11 15.13 19.96 10.62 20.54 45.54 8.97 4.56 5.06 5.32 19.00 6.30 26.95 36.67 49.82 26.83 12.81 6.30 0.00 94.34 11.06 5.51 16.39 19 ER3a ExonRegion 0 22.45 13.65 40.85 12.72 14.47 26.68 9.42 18.53 8.84 15.38 73.58 8.20 15.16 92.65 122.55 70.37 47.50 12.84 19.52 144.81 19.55 10.51 16.23 20 E3_Da NovelBoundary 0 17.56 5.66 40.92 6.13 31.58 11.19 1.99 4.48 5.44 5.26 22.27 13.05 0.00 29.73 23.73 23.24 30.01 4.48 0.00 71.97 10.56 9.25 4.10 21 E3a_E4a KnownJunction 0 27.12 2.96 40.15 21.24 8.15 34.87 6.05 15.32 2.89 21.89 56.75 18.61 25.81 85.59 136.60 62.04 47.87 8.33 25.13 136.85 22.24 11.76 12.29 22 I3 Intron 0 4.50 0.00 2.91 4.32 9.95 0.00 0.70 5.47 0.98 1.82 9.24 1.89 6.16 10.10 21.49 12.63 3.51 4.39 10.15 27.13 2.34 1.11 4.68 23 I3_SR1 SilentIntronRegion 0 4.53 0.00 2.97 4.41 10.16 0.00 0.72 5.59 1.00 1.85 9.44 1.93 6.29 10.28 21.91 12.90 3.58 4.48 10.37 27.70 2.37 1.13 4.78 24 E4_Aa NovelBoundary 0 14.45 9.54 20.70 3.96 28.69 14.37 6.58 7.23 4.72 4.14 0.00 0.00 18.83 26.08 37.83 15.55 21.88 10.65 0.00 29.40 2.29 6.12 0.00 25 ER4a ExonRegion 0 20.20 13.22 33.94 13.94 24.01 59.45 6.67 13.71 9.53 16.06 78.54 6.39 13.05 114.23 128.89 66.06 52.43 6.93 15.63 152.64 20.64 14.05 22.17 26 E4_Da NovelBoundary 0 27.26 6.71 16.59 12.42 16.21 25.38 15.41 6.08 6.48 3.12 11.42 0.00 0.00 15.25 15.08 31.96 12.81 1.87 13.08 50.81 0.00 2.51 10.93 27 E4a_E5a KnownJunction 0 15.11 11.71 16.65 16.35 19.02 29.59 0.00 6.82 5.01 13.51 57.01 0.00 0.00 63.28 102.85 37.26 29.55 2.36 18.45 108.53 17.24 5.63 7.00 28 I4 Intron 0 9.64 0.93 15.80 6.01 6.09 10.02 5.12 3.52 4.19 3.50 13.20 4.06 6.53 18.60 16.44 10.83 9.02 6.06 5.08 46.99 1.00 3.32 4.01 29 I4_SR1 SilentIntronRegion 0 9.72 0.93 15.94 6.07 6.15 10.11 5.17 3.55 4.23 3.53 13.32 4.10 6.59 18.76 16.58 10.92 9.10 6.12 5.12 47.40 1.01 3.35 4.05 30 E5_Aa NovelBoundary 0 21.56 0.00 18.07 5.49 3.23 13.74 3.89 0.00 5.67 2.34 5.37 0.00 6.82 4.89 25.59 21.11 12.16 2.57 0.00 26.91 2.41 0.00 0.00 31 ER5a ExonRegion 0 21.15 8.51 36.95 11.78 12.24 26.61 4.43 8.26 8.37 9.27 60.44 12.54 14.34 87.26 114.90 43.63 38.45 8.85 10.63 152.55 16.13 8.65 14.61