Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NLE1 Gene 0 17.29 59.69 80.36 53.00 26.63 68.03 19.77 31.04 33.26 52.66 106.36 23.79 24.86 94.75 90.91 76.98 78.33 121.06 81.99 68.14 63.34 32.30 32.41 2 262335 Transcript 0 0.00 0.00 0.31 0.00 0.00 0.00 0.00 0.00 0.15 0.72 0.72 0.00 0.00 0.00 0.00 0.37 0.00 0.00 0.00 0.00 0.55 0.00 0.00 3 360831 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 442241 Transcript 0 0.00 4.07 1.23 2.04 2.01 4.58 1.99 3.46 1.54 2.01 1.93 0.00 0.00 2.03 0.73 0.00 0.00 1.39 8.76 5.85 1.10 0.00 0.00 5 473567 Transcript 0 1.02 17.43 26.50 10.66 10.74 16.64 4.43 4.67 21.46 16.11 15.07 6.29 0.65 16.79 14.39 24.05 9.91 42.85 21.53 18.20 14.54 7.63 1.82 6 479807 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 436188 Transcript 0 11.49 7.51 1.81 2.70 4.60 14.50 8.49 1.27 2.83 1.76 10.58 2.54 17.97 17.44 17.57 12.07 20.48 16.15 10.92 19.01 7.92 6.71 4.35 8 ER1a ExonRegion 0 0.24 1.81 0.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.72 0.00 0.00 0.00 4.35 0.00 4.40 0.00 0.00 0.00 0.00 0.00 0.00 9 E1_Da KnownBoundary 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E1a_E1d KnownJunction 0 6.82 23.81 29.86 22.18 7.81 12.15 11.84 4.39 8.04 12.44 34.54 0.00 0.00 2.94 6.18 8.54 11.41 1.70 0.00 2.62 7.78 5.27 11.35 11 ER1b ExonRegion 1 2.12 3.05 1.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.87 0.00 2.35 0.00 29.01 0.00 6.60 0.00 0.00 0.00 0.00 0.00 0.00 12 ER1c ExonRegion 1 2.12 4.07 5.42 5.08 0.41 0.00 1.12 0.00 1.81 3.62 6.84 0.00 4.69 0.00 31.69 0.00 6.60 0.00 0.00 0.74 0.00 0.00 0.00 13 ER1d ExonRegion 0 0.02 16.16 7.22 2.71 5.94 8.94 2.00 3.13 1.83 4.32 2.97 0.00 0.03 0.92 1.77 2.23 5.05 7.93 4.40 9.29 2.67 0.78 1.10 14 E1_Ad KnownBoundary 0 3.26 11.12 6.30 4.03 7.64 5.39 0.00 3.82 5.87 2.34 2.00 0.00 0.00 2.30 0.00 0.00 12.53 13.72 8.19 8.25 7.91 0.00 0.00 15 ER1e ExonRegion 1 3.32 9.16 23.48 13.16 6.03 9.22 1.43 9.74 11.38 20.84 45.58 7.78 5.54 19.34 18.69 10.23 60.55 39.46 19.78 32.38 33.90 6.83 10.99 16 E1b_E2a KnownJunction 1 0.00 12.30 52.81 36.89 4.33 5.00 2.25 19.02 13.60 39.62 199.26 10.80 6.49 53.39 35.48 15.64 193.36 82.70 31.53 62.00 116.88 5.76 4.35 17 E2_Aa NovelBoundary 0 14.52 0.00 6.36 4.99 7.98 8.46 8.70 8.46 1.62 3.33 8.48 0.00 0.00 19.31 8.90 15.81 16.92 2.20 4.80 2.81 0.00 5.76 3.41 18 ER2a ExonRegion 0 6.50 39.06 69.04 49.51 23.20 67.06 19.69 28.50 33.71 47.96 137.09 19.34 25.43 117.67 122.62 104.76 99.87 124.29 105.89 88.43 74.07 34.49 47.27 19 E2_Da NovelBoundary 0 6.67 25.72 22.94 12.52 16.21 23.05 18.81 11.01 10.62 15.63 9.37 12.90 6.33 24.55 8.90 18.97 0.00 38.22 24.66 17.77 5.62 8.63 4.18 20 E2a_E3a KnownJunction 0 10.08 94.65 90.15 52.57 10.87 123.22 34.01 15.90 22.77 40.72 171.83 38.26 34.90 80.46 155.76 84.08 81.81 130.00 87.72 74.72 55.48 22.84 23.65 21 E2b_E3a KnownJunction 0 0.00 15.92 30.57 8.86 8.66 16.01 0.00 1.77 25.55 17.11 15.74 7.05 0.00 15.66 9.77 25.04 12.53 46.26 22.97 19.81 17.61 6.06 0.00 22 ER2b ExonRegion 0 2.04 18.93 22.44 12.45 12.83 17.26 8.86 7.57 17.38 15.11 14.40 5.52 1.29 17.92 19.01 23.06 7.28 39.44 20.10 16.58 11.47 9.20 3.65 23 ER3a ExonRegion 0 28.68 101.91 99.09 77.55 25.75 64.00 19.40 30.72 34.54 55.71 206.31 29.60 44.67 157.24 186.08 133.93 104.31 152.44 168.74 94.33 103.66 42.58 45.11 24 E3a_E4a KnownJunction 0 27.41 68.80 74.24 86.97 21.65 58.55 19.56 37.87 24.16 61.33 183.73 18.46 42.04 130.73 164.16 92.71 95.56 159.97 100.80 107.89 107.12 72.38 19.21 25 ER4a ExonRegion 0 21.25 51.61 75.35 63.08 29.26 60.28 19.00 30.44 31.98 55.78 157.97 42.62 32.28 140.73 125.28 99.59 96.58 148.73 89.36 73.20 83.34 44.94 30.55 26 E4a_E5a KnownJunction 0 18.89 70.97 73.89 74.32 15.87 61.61 16.16 33.43 37.73 49.10 166.62 24.76 26.78 147.21 197.54 82.12 97.34 149.69 84.52 69.48 68.33 47.15 21.43 27 E4a_E6a NovelJunction 0 0.00 3.35 9.31 0.00 7.89 2.33 2.25 5.01 2.46 1.13 7.48 0.00 0.00 4.89 0.00 3.50 0.00 11.81 0.00 9.65 0.00 3.06 0.00 28 E4b_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER4b ExonRegion 0 0.00 0.00 0.61 0.00 0.00 0.00 0.00 0.00 0.31 1.43 1.45 0.00 0.00 0.00 0.00 0.74 0.00 0.00 0.00 0.00 1.10 0.00 0.00 30 ER5a ExonRegion 0 13.81 45.51 59.86 60.35 20.43 58.43 19.97 27.47 36.55 49.97 129.61 34.34 26.11 146.87 127.62 125.07 97.29 156.46 89.02 61.39 91.19 39.90 40.44 31 E5a_E6a KnownJunction 0 37.93 68.61 72.65 69.52 23.51 78.25 30.21 37.34 28.10 53.78 103.55 18.76 13.47 112.90 65.52 93.91 109.30 119.88 77.46 62.45 68.39 44.52 41.32 32 ER5b ExonRegion 0 17.02 50.08 66.37 66.84 25.20 51.73 28.63 34.79 37.62 49.84 112.43 19.48 23.25 131.49 84.14 102.04 106.59 135.27 96.09 61.52 75.11 42.19 41.72 33 E6_Ab NovelBoundary 0 15.71 47.43 62.95 53.27 22.84 73.31 17.93 28.01 24.04 57.86 118.82 18.31 31.98 126.08 81.34 70.41 84.53 123.03 88.00 47.04 78.64 26.09 26.55 34 ER6a ExonRegion 0 18.58 56.71 61.77 56.38 25.07 66.42 19.81 31.94 26.49 56.54 118.55 16.36 21.71 125.00 101.65 86.74 102.45 136.32 84.00 54.53 75.25 37.58 33.61 35 ER6b ExonRegion 0 10.43 64.50 79.54 57.00 20.10 60.66 19.92 28.39 39.03 51.89 138.82 20.84 16.58 149.37 115.32 107.43 110.28 129.04 97.15 59.83 93.17 42.21 40.39 36 E6a_E7a KnownJunction 0 13.93 85.18 74.78 66.19 7.89 86.71 33.96 26.45 40.22 52.25 163.94 25.96 21.43 134.97 80.97 85.45 120.06 122.99 81.88 62.13 100.08 43.29 24.24 37 ER7a ExonRegion 0 24.19 59.89 93.48 65.99 19.61 79.68 30.45 36.85 37.45 66.95 160.77 23.47 22.73 142.20 127.72 117.14 129.69 145.49 108.50 72.58 95.65 42.53 49.14 38 E7b_E8a KnownJunction 0 56.38 57.42 71.35 46.91 41.77 110.28 33.03 40.17 36.46 65.84 187.47 18.91 39.12 174.41 140.18 168.76 170.17 162.83 149.56 77.66 128.56 86.34 36.88 39 ER7b ExonRegion 1 35.98 44.33 83.33 52.88 35.86 89.86 37.87 36.99 34.58 83.04 165.84 12.99 37.52 182.23 133.46 161.68 146.56 145.60 118.50 66.81 119.44 69.59 42.29 40 ER7c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 ER8a ExonRegion 0 28.91 41.80 72.24 55.82 20.38 73.27 17.89 31.11 30.38 76.82 140.07 31.23 24.35 154.46 140.31 140.26 147.35 140.35 104.44 70.03 105.59 57.10 38.18 42 E8a_E9a KnownJunction 1 33.64 53.67 80.42 63.63 11.71 85.06 8.52 32.33 29.66 72.85 143.98 37.51 6.49 123.14 89.50 116.98 162.32 164.24 86.03 62.13 85.50 37.84 40.55 43 ER9a ExonRegion 0 23.04 67.94 86.25 61.77 27.15 101.51 28.05 33.92 31.36 72.02 162.99 39.41 27.40 136.19 130.57 111.21 112.34 152.12 83.43 83.69 86.62 36.76 50.91 44 E9a_E10a KnownJunction 0 3.33 2.57 0.00 5.29 0.00 9.71 0.00 1.81 1.45 1.10 12.42 0.00 6.33 7.36 11.00 15.72 9.26 15.79 8.85 13.61 5.99 0.00 0.00 45 E9a_E11a KnownJunction 0 27.26 64.33 82.94 58.77 17.40 102.50 13.65 40.29 26.71 70.24 95.13 42.61 33.60 151.33 138.82 100.57 102.57 189.65 74.45 76.76 66.16 27.80 46.44 46 ER10a ExonRegion 0 10.91 4.57 0.30 2.80 10.50 19.53 2.50 1.99 4.15 0.54 10.47 7.62 15.91 19.35 23.41 13.31 14.59 12.35 12.61 9.47 8.74 5.98 6.40 47 E10_Da NovelBoundary 1 1218.96 988.38 370.60 375.91 797.54 663.65 1057.70 362.44 361.40 400.59 287.34 357.42 428.38 239.98 361.70 882.08 727.16 558.58 860.07 842.49 443.07 327.72 876.85 48 E10a_E11a KnownJunction 0 20.23 15.39 5.12 0.00 3.31 14.25 22.96 0.00 2.89 3.65 8.84 0.00 31.65 25.60 18.30 7.18 37.59 20.31 11.29 33.94 9.02 14.14 6.66 49 ER11a ExonRegion 0 14.18 52.33 86.33 51.90 19.95 65.04 16.71 34.05 36.02 62.46 157.78 47.95 41.30 142.92 152.50 129.68 111.84 140.80 80.93 82.14 82.14 49.67 52.68 50 E11a_E12a KnownJunction 1 16.74 57.36 141.75 76.81 42.78 43.10 27.12 37.75 28.70 73.71 159.15 51.32 0.00 126.79 157.36 109.46 94.34 173.19 69.08 112.62 81.24 37.66 26.89 51 ER12a ExonRegion 0 25.16 69.20 113.68 69.66 26.27 82.52 31.91 41.87 47.44 88.73 163.70 26.10 28.80 149.74 141.63 134.25 149.28 202.91 99.60 87.98 103.42 52.44 45.50 52 E12a_E13a KnownJunction 0 82.98 122.22 121.64 65.93 49.58 231.40 54.76 61.94 64.47 99.90 245.43 25.21 61.36 186.47 270.10 273.26 204.86 250.54 192.95 117.35 144.56 84.13 62.14 53 E13_Aa NovelBoundary 0 12.45 0.00 8.25 3.36 0.00 4.54 0.00 1.56 1.53 1.58 7.48 0.00 0.00 0.00 11.25 3.25 9.07 11.07 13.46 5.88 5.50 0.00 8.19 54 ER13a ExonRegion 0 33.19 95.69 120.84 81.12 40.28 120.92 26.10 41.56 41.50 88.06 168.54 26.80 52.50 133.25 155.20 126.40 118.30 172.95 100.60 93.94 92.42 53.20 42.91 55 E13_Da KnownBoundary 0 30.15 71.76 125.01 84.60 47.54 57.18 12.32 55.70 64.99 93.26 99.97 17.71 35.55 92.71 125.84 106.30 62.18 156.69 78.68 103.42 67.15 52.48 14.68 56 ER13b ExonRegion 0 19.83 103.28 104.52 66.69 42.73 80.96 23.81 46.53 46.14 67.64 98.88 16.74 24.26 86.86 89.03 57.43 57.64 125.22 77.83 90.80 55.40 35.44 30.72 57 E13_Db KnownBoundary 0 38.01 155.63 104.46 72.29 102.38 149.69 51.05 41.65 51.33 74.46 67.17 19.21 47.89 79.11 73.92 92.11 57.50 132.03 94.21 74.53 43.55 36.19 33.29 58 ER13c ExonRegion 0 20.77 75.19 106.86 61.51 38.24 80.06 23.79 39.99 42.29 54.04 67.47 25.92 24.21 61.23 50.50 44.28 47.51 132.46 94.14 73.93 46.13 26.81 24.75 59 ER13d ExonRegion 0 0.00 4.07 1.23 2.04 2.01 4.58 1.99 3.46 1.54 2.01 1.93 0.00 0.00 2.03 0.73 0.00 0.00 1.39 8.76 5.85 1.10 0.00 0.00 60 IG17 Intergenic 0 8.54 39.34 59.13 29.41 27.40 37.37 10.14 18.65 21.90 21.75 27.39 20.34 15.95 30.40 20.30 18.75 24.93 46.27 38.23 46.22 19.60 11.85 8.51 61 IG17_AR1 ActiveIntergenicRegion 0 8.57 39.50 59.36 29.53 27.51 37.52 10.18 18.73 21.99 21.84 27.50 20.42 16.02 30.52 20.39 18.83 25.03 46.46 38.37 46.41 19.68 11.90 8.53