Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C17orf51 Gene 0 7.82 34.82 27.02 11.80 20.98 24.38 26.21 20.89 37.35 46.27 1.59 1.96 1.78 0.08 0.36 0.07 4.26 29.58 13.12 51.04 67.33 56.16 50.97 2 468381 Transcript 0 1.78 11.36 19.09 8.63 4.44 11.20 10.15 8.48 20.05 28.95 0.00 0.00 0.00 0.00 0.17 0.19 0.00 15.82 15.19 46.57 16.77 10.24 10.28 3 391411 Transcript 0 4.44 17.37 12.54 6.17 10.90 11.80 18.15 10.57 21.64 23.04 1.56 1.04 0.87 0.05 0.07 0.00 3.69 22.70 6.48 27.69 60.53 58.03 54.22 4 ER1a ExonRegion 0 1.89 14.65 13.02 5.30 5.39 13.34 12.28 4.89 10.45 9.15 0.00 0.00 0.00 0.00 0.46 0.66 0.00 7.66 8.97 28.33 11.99 6.01 3.03 5 E1_Da NovelBoundary 0 0.00 0.00 14.22 8.72 3.40 33.45 1.90 10.68 9.58 5.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.07 13.37 11.89 0.00 0.00 0.00 6 E1a_E2a KnownJunction 0 0.00 6.31 35.10 16.12 0.00 2.90 6.36 10.88 21.50 36.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.12 49.04 83.54 23.35 22.47 11.35 7 E2_Aa NovelBoundary 0 0.00 6.31 13.01 7.56 19.61 13.91 5.96 4.48 20.25 7.04 0.00 6.30 6.82 4.94 4.33 3.85 4.49 26.12 9.22 18.15 0.00 3.12 0.00 8 ER2a ExonRegion 0 4.20 26.09 37.39 16.18 9.07 24.77 20.44 20.16 45.17 58.44 0.00 0.00 0.00 0.00 0.41 0.30 0.00 27.40 17.96 71.63 27.94 20.22 17.91 9 E2_Da NovelBoundary 0 0.00 0.00 17.30 0.00 0.00 0.00 0.00 1.85 13.28 11.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.53 0.00 8.56 0.00 0.00 0.00 10 E2a_E4a KnownJunction 0 2.82 9.74 9.93 5.56 7.72 14.99 11.66 6.45 23.15 40.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.91 0.00 49.34 20.57 2.51 19.12 11 ER3a ExonRegion 0 3.07 7.52 6.46 2.88 4.04 6.95 9.40 5.38 12.02 13.68 1.98 0.86 0.82 0.00 0.00 0.00 4.58 13.26 5.31 16.12 54.31 32.75 31.97 12 E3a_E4a KnownJunction 0 9.85 32.89 19.19 9.89 20.97 16.69 37.41 17.13 34.78 29.28 2.37 0.00 0.00 0.00 0.00 0.00 4.77 42.08 7.44 37.46 103.54 137.96 122.07 13 ER4a ExonRegion 0 4.58 36.99 32.09 11.95 17.33 26.88 33.18 31.16 42.55 64.06 0.44 3.98 6.51 0.61 0.00 0.00 4.22 46.03 23.39 68.70 114.97 104.68 107.25 14 E4_Da KnownBoundary 0 0.00 24.40 32.58 11.59 0.00 13.17 14.57 20.50 37.79 58.40 2.21 19.06 6.33 0.00 0.00 0.00 21.41 42.28 8.47 53.75 108.67 79.48 82.46 15 E4a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER4b ExonRegion 0 4.82 27.03 23.30 10.55 18.61 23.57 25.79 18.04 38.51 48.03 1.89 3.31 2.67 0.19 0.30 0.00 5.42 35.44 13.19 55.06 84.26 61.41 59.91 17 E4_Ab KnownBoundary 0 6.08 49.27 26.94 15.88 29.71 24.47 27.91 31.91 54.60 52.68 2.21 5.85 6.82 0.00 0.00 0.00 8.32 34.70 12.05 41.48 68.94 83.52 57.96 18 ER4c ExonRegion 0 15.67 62.16 38.87 16.83 38.72 35.14 38.62 33.32 49.62 60.57 2.02 2.01 1.93 0.00 0.61 0.00 5.19 34.70 14.97 58.82 76.25 79.67 66.60 19 ER4d ExonRegion 0 0.00 2.03 1.23 1.36 0.00 0.00 0.00 1.73 1.24 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 0.00 0.00 2.94 20 IG18_AR5 ActiveIntergenicRegion 0 7.29 38.39 32.17 13.21 30.29 24.44 29.97 22.17 27.99 39.99 0.15 1.65 0.15 0.05 0.06 0.00 1.05 14.89 10.73 36.64 38.22 35.25 41.02 21 IG18_SR4 SilentIntergenicRegion 0 15.64 29.54 36.16 9.10 35.30 22.64 32.89 13.37 19.48 34.42 0.00 0.00 0.00 0.00 0.69 0.00 0.00 12.41 3.52 38.33 30.55 20.85 47.99 22 IG18_AR4 ActiveIntergenicRegion 0 14.02 63.63 37.97 22.70 66.64 27.73 38.47 32.00 27.79 46.57 0.16 0.30 0.00 0.00 0.03 0.00 0.42 5.16 3.36 23.46 5.89 26.92 16.85 23 IG18_SR3 SilentIntergenicRegion 0 8.18 20.20 8.86 1.33 34.42 29.47 22.69 11.98 8.81 13.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.57 0.00 4.59 0.90 2.79 3.00