Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CCDC144NL Gene 0 2.92 68.35 164.50 6.43 17.61 10.53 66.00 30.07 20.38 19.44 0.00 0.32 0.28 0.07 0.00 0.00 0.00 2.11 4.80 25.94 1.68 0.00 0.00 2 327925 Transcript 0 1.67 22.46 47.22 1.27 7.10 11.91 27.68 20.63 18.00 14.59 0.00 0.06 0.05 0.01 0.00 0.00 0.00 0.85 2.44 12.40 1.89 0.00 0.00 3 ER1a ExonRegion 0 8.37 34.42 77.07 0.45 14.71 8.67 25.03 16.37 16.34 83.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.51 6.65 47.23 2.98 0.00 0.00 4 E1_Da NovelBoundary 0 18.37 118.47 77.11 0.00 16.64 0.00 41.65 0.00 1.30 69.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 32.66 0.00 0.00 0.00 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 0 5.68 139.44 82.13 0.17 56.59 0.00 58.80 0.42 1.35 48.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.45 7.77 47.59 0.00 0.00 0.00 7 Ix_SR1 SilentIntronRegion 0 5.69 139.66 82.26 0.17 56.68 0.00 58.89 0.42 1.35 48.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.45 7.79 47.67 0.00 0.00 0.00 8 Ix Intron 0 8.12 56.56 42.79 0.49 32.09 0.00 36.82 1.10 0.22 29.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.34 0.78 19.55 0.00 0.00 0.00 9 Ix_SR1 SilentIntronRegion 0 8.13 56.69 42.89 0.50 32.16 0.00 36.90 1.10 0.22 29.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.34 0.78 19.60 0.00 0.00 0.00 10 E2_Aa NovelBoundary 0 0.00 124.32 53.37 0.00 27.67 0.00 36.66 2.55 1.79 43.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30.42 0.00 0.00 0.00 11 ER2a ExonRegion 0 0.00 0.00 0.03 0.00 0.00 15.96 3.30 15.60 17.78 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.03 3.51 0.00 0.00 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 20.16 6.71 27.56 29.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.00 13 Ix Intron 0 2.68 41.66 15.09 0.32 13.18 0.29 13.03 2.05 0.29 7.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.52 9.46 0.00 0.00 0.00 14 Ix_SR1 SilentIntronRegion 0 2.69 41.76 15.13 0.32 13.22 0.29 13.07 2.05 0.29 7.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 9.47 0.00 0.00 0.00 15 Ix Intron 0 5.14 73.94 48.98 0.49 28.31 2.77 59.30 9.36 7.66 25.55 0.04 0.14 0.00 0.01 0.02 0.00 0.03 0.21 3.77 89.35 0.49 0.00 0.00 16 Ix_SR2 SilentIntronRegion 0 8.27 90.69 35.60 0.98 36.32 1.66 57.38 10.65 7.38 34.38 0.00 0.37 0.00 0.00 0.00 0.00 0.00 0.32 6.23 81.21 0.51 0.00 0.00 17 Ix_AR1 ActiveIntronRegion 0 9.35 131.65 29.92 0.00 61.02 3.83 100.10 14.15 10.05 69.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.37 5.96 165.67 1.99 0.00 0.00 18 Ix_SR1 SilentIntronRegion 0 4.52 69.64 51.65 0.43 26.11 2.91 58.48 9.02 7.64 22.91 0.05 0.11 0.00 0.01 0.02 0.00 0.04 0.19 3.31 88.53 0.45 0.00 0.00 19 E3_Aa NovelBoundary 0 0.00 5.85 149.34 5.39 8.49 5.22 23.54 27.93 33.16 6.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.38 9.60 12.72 0.00 0.00 0.00 20 ER3a ExonRegion 0 1.38 12.15 31.40 0.00 6.88 18.00 39.32 22.64 25.30 4.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.33 1.88 14.12 2.50 0.00 0.00 21 E3a_E4a KnownJunction 0 0.00 28.42 23.00 0.00 8.49 10.39 40.36 28.14 16.15 7.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.45 3.76 2.43 0.00 0.00 0.00 22 ER4a ExonRegion 0 1.94 82.23 199.02 8.43 19.62 10.21 79.06 34.11 20.99 7.21 0.00 0.43 0.37 0.10 0.00 0.00 0.00 2.66 4.77 23.01 1.28 0.00 0.00 23 IG9 Intergenic 0 0.92 18.30 25.62 0.16 6.47 6.19 30.23 15.25 12.46 1.67 0.00 0.00 0.00 0.01 0.02 0.00 0.00 0.04 0.42 4.31 0.32 0.00 0.00 24 IG9_SR4 SilentIntergenicRegion 0 1.81 43.96 49.81 0.23 12.64 10.81 74.17 25.34 18.38 3.19 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.07 1.20 9.99 0.12 0.00 0.00 25 IG9_AR9 ActiveIntergenicRegion 0 8.33 59.75 96.74 0.00 25.27 24.08 107.70 52.47 24.51 4.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.06 7.08 0.00 0.00 0.00 26 IG9_AR8 ActiveIntergenicRegion 0 3.87 40.71 35.79 0.37 18.94 11.51 55.06 24.31 14.03 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.62 2.68 5.36 1.48 0.00 0.00 27 IG9_SR3 SilentIntergenicRegion 0 7.39 58.51 31.71 3.92 32.77 19.27 84.11 38.03 13.63 3.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.40 8.88 0.00 0.00 0.00 28 IG9_AR7 ActiveIntergenicRegion 0 2.41 34.71 30.04 1.08 21.78 17.33 85.69 36.30 15.50 3.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.93 0.00 0.00 0.00 29 IG9_AR6 ActiveIntergenicRegion 0 0.00 30.00 47.18 0.00 4.35 4.81 76.79 40.40 19.14 2.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.27 0.00 0.00 0.00 30 IG9_AR5 ActiveIntergenicRegion 0 0.00 49.62 52.81 0.00 16.05 5.32 97.44 46.32 20.13 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.85 0.00 0.00 0.00 31 IG9_AR4 ActiveIntergenicRegion 0 2.12 68.71 59.59 0.00 26.62 9.94 149.61 50.76 32.24 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.75 0.00 0.00 0.00 32 IG9_SR2 SilentIntergenicRegion 0 0.85 16.20 39.53 0.17 6.48 7.81 28.18 21.65 17.33 1.77 0.00 0.00 0.00 0.00 0.06 0.00 0.00 0.07 0.13 5.31 0.57 0.00 0.00