Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC122129.4 Gene 0 33.85 31.91 12.31 9.23 23.54 20.42 23.69 10.57 10.79 9.27 11.91 20.23 19.14 13.40 37.00 33.57 19.86 21.96 26.61 38.06 12.91 7.33 34.88 2 366333 Transcript 1 1396.45 1533.82 5614.77 5949.93 985.20 940.27 1598.40 6109.07 5851.41 5386.46 579.37 219.25 274.95 198.59 533.55 1611.48 1311.27 7337.62 1415.41 1795.81 960.70 887.43 1637.58 3 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 Ix Intron 0 22.39 13.44 13.80 14.58 10.61 8.66 5.75 8.76 12.17 7.75 0.37 6.88 14.54 1.23 7.58 6.74 1.25 17.52 11.43 7.64 11.66 2.75 8.32 5 Ix_SR1 SilentIntronRegion 0 22.47 13.49 13.84 14.63 10.65 8.69 5.77 8.79 12.21 7.78 0.37 6.90 14.59 1.23 7.59 6.76 1.25 17.58 11.47 7.66 11.70 2.77 8.35 6 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER3a ExonRegion 0 0.00 0.13 0.23 0.09 0.17 0.23 0.17 0.00 0.08 0.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.13 0.41 0.00 0.00 8 Ix Intron 0 24.94 20.03 8.03 12.87 24.00 6.46 6.75 11.32 13.60 9.61 1.36 2.51 4.90 2.97 7.47 7.84 5.22 17.77 6.16 6.74 7.36 3.66 6.71 9 Ix_AR1 ActiveIntronRegion 0 17.41 18.51 4.17 15.04 25.95 8.21 3.91 7.82 13.46 12.52 0.00 6.82 9.85 4.04 5.58 4.83 6.60 9.82 3.86 8.22 7.91 2.45 5.36 10 Ix_SR1 SilentIntronRegion 0 35.18 26.07 12.02 15.23 29.42 7.32 9.91 16.01 17.28 10.76 2.38 1.10 3.81 3.25 10.36 11.37 5.95 26.31 8.90 7.81 9.04 5.22 9.15 11 E4_Aa NovelBoundary 0 48.30 43.94 23.42 24.57 26.91 24.25 43.63 33.80 21.59 22.91 31.43 5.55 12.66 13.24 35.85 55.63 33.47 16.25 11.20 39.50 34.41 21.55 33.55 12 ER4a ExonRegion 0 64.18 60.89 20.72 15.07 44.70 40.24 46.49 21.66 12.68 19.94 29.33 18.59 14.35 17.91 38.40 70.81 37.86 29.62 40.38 82.98 25.41 14.52 61.06 13 E4_Da NovelBoundary 0 85.35 100.25 41.16 75.35 94.48 98.41 122.55 82.35 62.24 86.50 19.64 13.05 30.84 16.54 31.52 63.49 47.87 143.30 52.33 96.58 53.25 39.74 78.70 14 E4a_E5a KnownJunction 0 13655.24 15100.53 51036.40 53920.15 9536.85 9337.58 15734.07 54281.77 52680.62 48079.08 5675.07 2197.47 2712.00 1963.34 5329.14 15961.62 12761.09 66045.93 14421.40 17944.43 9636.22 9084.17 16604.66 15 Ix Intron 0 11.12 27.93 13.09 17.47 24.61 13.15 18.66 11.38 16.93 8.78 1.15 4.20 17.72 3.15 6.28 2.13 3.94 3.63 6.47 7.88 3.16 1.74 8.07 16 Ix_SR1 SilentIntronRegion 0 11.12 27.93 13.09 17.47 24.61 13.15 18.66 11.38 16.93 8.78 1.15 4.20 17.72 3.15 6.28 2.13 3.94 3.63 6.47 7.88 3.16 1.74 8.07 17 E5_Aa NovelBoundary 0 12.74 34.86 11.21 24.47 27.93 24.59 16.25 15.85 9.98 6.10 0.00 0.00 6.33 4.65 0.00 10.68 4.02 24.33 19.01 5.05 2.47 5.08 17.93 18 ER5a ExonRegion 0 58.75 58.67 29.49 16.72 35.21 35.74 42.59 21.08 20.97 19.63 19.29 29.46 32.50 23.06 55.07 62.52 30.68 40.22 47.24 72.09 21.05 9.93 59.60 19 E5_Da NovelBoundary 0 118.98 193.26 222.67 285.51 112.73 64.57 162.61 280.41 201.59 205.20 69.86 26.71 31.98 15.77 65.39 104.08 147.17 212.82 123.77 180.18 96.19 66.74 145.89 20 E5a_E6a KnownJunction 1 1038.33 962.26 8378.30 8935.89 889.13 595.85 1233.69 10352.38 9301.64 8999.86 486.44 52.97 117.20 98.48 278.88 1230.79 1288.54 11022.21 643.41 1093.11 633.71 404.08 772.28 21 Ix Intron 0 16.71 19.75 1.11 3.70 11.37 10.02 1.61 12.51 16.76 3.11 1.17 2.16 4.69 3.13 13.26 0.00 4.01 12.85 3.87 1.29 2.68 2.55 5.35 22 Ix_SR1 SilentIntronRegion 0 19.90 17.90 0.74 3.00 11.77 7.89 0.79 9.68 11.12 2.64 1.55 0.87 9.85 2.60 12.48 0.00 3.63 14.23 0.00 0.00 4.19 3.13 6.46 23 Ix_AR1 ActiveIntronRegion 0 27.51 27.79 1.23 4.09 18.73 12.71 2.38 13.83 18.03 3.44 1.93 4.33 9.38 6.28 22.63 0.00 6.60 14.78 0.00 0.00 4.41 2.08 8.81 24 Ix_AR2 ActiveIntronRegion 0 13.17 17.78 1.14 3.71 9.27 9.64 1.53 12.64 17.38 3.10 0.90 1.79 2.51 2.35 10.80 0.00 3.36 12.07 5.55 1.87 1.94 2.59 4.20 25 E6_Aa NovelBoundary 0 22.08 34.34 6.36 13.35 7.89 2.90 18.02 20.00 18.06 29.76 1.95 0.00 18.83 7.18 13.35 6.41 14.12 23.55 26.92 8.05 5.19 2.69 41.15 26 ER6a ExonRegion 1 24.01 22.68 3.32 6.43 18.56 10.75 16.88 4.84 8.83 1.58 4.26 26.36 18.82 11.59 41.09 20.65 16.88 17.05 24.56 19.63 8.42 7.94 27.14 27 E6_Da NovelBoundary 1 776.58 729.15 473.76 614.51 569.36 411.47 634.79 543.49 518.08 532.19 230.69 38.11 126.29 75.76 318.81 956.59 524.36 1055.98 679.17 936.90 456.10 617.97 960.42 28 E6a_E7a KnownJunction 0 492.46 647.91 2292.73 2544.37 287.01 303.01 494.71 2512.25 2330.16 2123.79 147.09 70.37 103.24 57.92 94.81 366.31 275.36 3534.94 372.15 526.81 228.76 237.22 453.62 29 E6a_E8a NovelJunction 0 548.76 503.73 2268.76 2466.72 355.01 259.57 548.50 2340.44 2359.32 2035.92 198.05 64.07 79.54 38.08 212.75 581.98 491.82 3639.61 499.12 649.02 321.24 269.37 562.71 30 Ix Intron 0 5.92 8.42 12.25 14.31 13.47 9.23 7.55 12.10 9.47 9.94 2.81 1.60 3.02 1.73 5.33 5.98 6.28 24.24 8.91 12.37 10.09 2.80 9.85 31 Ix_AR1 ActiveIntronRegion 0 5.94 8.45 12.31 14.37 13.53 9.27 7.59 12.15 9.51 9.98 2.82 1.60 3.04 1.74 5.35 6.01 6.30 24.35 8.95 12.43 10.14 2.81 9.90 32 Ix Intron 0 15.32 24.09 12.78 15.05 19.13 13.19 13.49 19.41 36.63 14.87 5.04 6.92 21.23 7.15 13.54 13.83 11.45 29.30 22.36 19.84 20.74 10.86 20.17 33 Ix_AR1 ActiveIntronRegion 0 15.33 24.11 12.79 15.06 19.15 13.20 13.50 19.43 36.66 14.88 5.04 6.92 21.25 7.16 13.56 13.84 11.46 29.33 22.38 19.86 20.75 10.87 20.19 34 ER7a ExonRegion 0 14.82 11.18 1.23 6.81 10.70 9.17 7.28 3.46 7.41 4.59 3.87 4.33 14.07 5.68 5.80 5.94 3.30 14.78 12.74 5.32 6.61 0.00 20.56 35 E8_Aa NovelBoundary 0 22.60 11.51 11.41 19.18 33.79 14.42 30.07 2.09 6.22 14.24 12.32 12.45 35.39 0.00 26.08 24.27 23.28 9.58 27.86 35.92 21.99 13.35 40.38 36 ER8a ExonRegion 0 13.16 7.79 0.10 3.65 14.89 10.43 6.56 2.33 3.14 2.58 7.73 12.26 12.26 6.56 25.83 7.59 10.22 9.08 7.60 9.46 7.06 3.84 14.47