Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF286 Gene 0 44.08 137.74 107.62 101.16 151.50 192.80 92.14 110.03 93.67 131.96 14.66 19.13 17.59 13.31 22.56 29.05 34.68 78.95 73.65 120.56 18.97 29.06 27.51 2 421016 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 412988 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 439334 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 472486 Transcript 0 2.89 0.00 0.00 0.00 33.11 50.60 11.70 1.73 7.61 2.82 0.00 0.00 0.00 0.00 0.00 8.20 0.00 0.00 7.91 2.94 2.59 3.12 7.09 6 464847 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 413242 Transcript 0 0.00 0.00 0.00 0.04 0.46 1.10 0.00 0.04 0.67 0.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.17 0.00 0.00 0.03 0.20 8 395894 Transcript 0 0.37 2.51 1.87 0.48 1.10 14.02 4.21 2.19 0.91 1.11 0.34 0.00 0.00 3.15 1.02 0.61 1.17 6.63 3.00 1.38 1.69 0.55 1.99 9 395893 Transcript 0 1.50 3.28 3.83 4.31 11.05 3.49 9.69 2.84 4.66 1.81 4.43 8.38 4.69 3.51 0.00 0.00 4.90 0.00 4.11 9.61 0.00 1.41 4.45 10 481540 Transcript 0 16.12 49.37 28.12 27.97 80.36 87.37 104.16 39.50 12.76 39.87 12.74 10.91 11.05 7.35 9.64 14.44 23.35 29.23 29.46 59.85 12.34 20.95 13.85 11 ER1a ExonRegion 0 2.32 2.99 1.80 2.12 0.49 4.41 2.17 0.17 0.43 3.26 5.17 0.00 1.21 0.66 2.63 2.46 1.78 7.54 2.81 4.80 0.00 1.10 1.14 12 E1_Ab KnownBoundary 0 0.00 0.00 6.00 4.89 0.00 0.00 0.00 0.00 0.00 12.25 4.74 0.00 0.00 0.00 0.00 0.00 4.58 20.06 0.00 3.07 0.00 2.94 4.10 13 E1_Ac KnownBoundary 0 6.08 24.67 1.27 0.00 7.47 64.85 19.34 1.85 4.08 0.00 2.68 0.00 5.84 0.00 0.00 0.00 0.00 3.86 9.60 0.00 0.00 0.00 0.00 14 ER1b ExonRegion 0 10.58 23.39 6.13 4.77 28.10 100.86 27.80 3.46 9.26 9.18 15.46 0.00 0.00 3.25 2.90 2.97 9.90 29.56 15.93 11.70 0.00 2.08 5.87 15 ER1c ExonRegion 0 25.69 77.28 6.84 9.69 72.99 314.29 101.43 10.56 21.75 24.15 15.95 0.00 0.00 16.92 14.59 21.22 19.35 88.49 50.61 32.56 10.10 9.09 35.73 16 E1_Da NovelBoundary 0 3.41 3.35 3.87 1.40 4.33 18.28 2.25 2.51 0.00 0.00 4.74 0.00 0.00 4.59 0.00 0.00 13.74 36.23 19.29 21.60 2.84 0.00 3.59 17 E1a_E2b KnownJunction 0 16.97 110.24 7.24 13.58 54.50 546.50 187.43 14.33 30.29 28.12 11.63 0.00 0.00 33.08 45.00 18.63 44.97 87.55 93.74 49.28 25.08 11.33 82.72 18 E1a_E2c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E1a_E3a KnownJunction 0 2.89 0.00 0.00 0.00 33.11 50.60 11.70 1.73 7.61 2.82 0.00 0.00 0.00 0.00 0.00 8.20 0.00 0.00 7.91 2.94 2.59 3.12 7.09 20 E2_Aa NovelBoundary 0 3.78 10.06 19.69 7.39 3.99 4.54 1.68 27.68 13.25 20.71 5.16 0.00 0.00 2.47 9.15 50.76 17.77 194.46 193.98 108.02 26.50 7.35 74.10 21 ER2a ExonRegion 0 0.37 2.51 1.87 0.48 1.10 14.02 4.21 2.19 0.91 1.11 0.34 0.00 0.00 3.15 1.02 0.61 1.17 6.63 3.00 1.38 1.69 0.55 1.99 22 E2_Ab KnownBoundary 0 0.00 2.89 11.29 8.09 15.45 5.79 5.92 15.16 15.65 13.67 5.37 0.00 0.00 7.24 0.00 0.00 9.07 80.63 22.31 24.61 14.52 0.00 11.69 23 ER2b ExonRegion 0 6.81 39.53 6.18 12.67 21.99 187.26 60.14 13.85 20.85 30.12 3.27 0.00 0.70 10.64 11.74 9.94 17.19 71.00 40.46 18.59 11.27 8.36 27.78 24 E2_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER2c ExonRegion 0 10.33 49.18 36.16 36.05 34.90 142.78 53.53 43.38 55.42 83.03 15.30 9.00 6.66 12.71 20.90 37.69 30.97 150.28 74.81 92.53 17.95 19.98 35.06 26 E2a_E3a KnownJunction 0 15.11 113.86 98.34 94.16 202.72 543.49 212.38 98.29 127.31 163.21 39.54 31.96 39.28 24.02 56.99 83.65 87.42 291.54 176.01 238.92 45.41 34.41 59.41 27 E3_Aa NovelBoundary 0 3.41 21.58 19.37 3.60 14.77 11.58 24.42 6.37 6.94 10.37 6.16 6.00 0.00 0.00 0.00 11.19 8.98 24.83 31.25 16.81 2.53 0.00 16.56 28 ER3a ExonRegion 0 7.41 83.55 69.31 67.04 150.79 417.49 161.72 82.10 96.57 139.28 30.36 17.41 40.65 19.73 27.14 65.02 81.22 197.48 112.62 181.38 38.11 29.30 58.12 29 E3_Ab KnownBoundary 0 6.67 52.29 75.25 66.92 46.60 112.78 69.87 103.63 90.22 160.47 9.32 18.16 25.65 9.95 25.47 39.99 29.08 196.49 71.91 114.48 13.59 11.27 49.25 30 ER3b ExonRegion 0 8.41 64.78 54.27 55.05 61.22 111.50 98.49 64.46 74.20 120.06 16.45 22.18 21.05 16.20 36.16 46.18 44.84 113.84 120.73 121.02 38.75 51.53 31.37 31 E3_Da NovelBoundary 0 0.00 9.54 10.61 15.55 0.00 24.19 8.26 3.45 1.62 15.55 0.00 0.00 6.82 0.00 0.00 0.00 4.39 15.67 25.51 20.77 3.09 3.06 12.98 32 E3a_E4a KnownJunction 0 9.71 114.91 71.38 69.09 101.27 177.85 161.81 73.52 94.67 151.50 26.01 42.91 27.27 31.26 44.75 58.10 78.73 142.02 223.35 224.54 48.12 61.48 32.18 33 I3_AR2 ActiveIntronRegion 0 3.49 14.54 9.79 6.42 22.81 20.67 17.65 8.50 7.34 8.22 1.33 4.27 2.69 0.16 1.41 1.23 3.18 8.09 8.75 27.79 2.73 4.30 4.04 34 E4_Aa NovelBoundary 0 3.78 8.88 13.22 5.23 37.35 5.11 28.53 16.59 5.73 6.34 2.00 0.00 6.66 0.00 5.07 8.46 4.30 3.48 26.64 59.89 8.53 5.57 7.77 35 ER4a ExonRegion 0 31.21 151.81 64.09 59.36 117.03 187.65 101.05 99.68 95.43 153.13 31.55 16.79 25.82 35.87 48.36 64.20 91.51 183.96 194.72 237.56 58.62 45.46 48.95 36 E4_Da NovelBoundary 0 0.00 21.38 9.61 8.42 29.37 7.33 22.92 9.78 1.50 6.26 2.53 7.65 0.00 0.00 0.00 0.00 0.00 3.52 0.00 11.51 8.34 9.37 0.00 37 E4a_E5a KnownJunction 0 49.42 178.72 72.65 67.06 131.58 185.97 103.65 95.09 116.38 151.42 25.95 5.40 47.56 26.90 50.81 55.37 97.62 149.44 155.30 258.10 49.30 52.91 38.24 38 ER5a ExonRegion 0 38.07 164.13 71.37 58.78 164.46 252.33 134.50 132.46 123.82 199.68 43.19 24.58 45.69 35.57 54.16 79.77 97.36 184.26 286.96 284.30 80.61 76.28 72.44 39 E5_Da KnownBoundary 0 30.60 86.43 34.68 31.03 111.55 106.25 125.95 51.67 9.95 59.45 7.26 11.85 20.29 7.71 14.46 22.73 36.84 71.30 109.37 93.89 18.16 16.96 10.67 40 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 41 E5a_E7a KnownJunction 1 0.00 49.60 27.08 26.77 97.88 128.62 47.56 68.55 69.96 97.46 10.16 19.96 20.45 16.13 73.31 51.95 35.25 39.01 83.30 125.28 13.71 25.23 31.50 42 E5a_E7b KnownJunction 0 0.00 21.05 8.07 16.02 19.35 40.94 23.49 21.93 33.07 31.51 22.58 6.30 6.82 4.94 0.00 29.31 13.37 81.50 120.00 80.79 20.32 36.92 11.87 43 ER5b ExonRegion 0 16.12 49.37 28.12 27.97 80.36 87.37 104.16 39.50 12.76 39.87 12.74 10.91 11.05 7.35 9.64 14.44 23.35 29.23 29.46 59.85 12.34 20.95 13.85 44 E5_Db NovelBoundary 0 34.75 86.83 21.94 42.05 75.30 103.69 122.11 38.08 22.89 68.12 9.05 0.00 6.82 12.66 0.00 3.76 12.81 22.80 29.27 51.65 2.35 24.86 19.97 45 E6_Aa NovelBoundary 0 3.63 12.04 16.94 16.81 44.14 25.21 44.56 12.94 13.92 13.54 0.00 12.60 0.00 0.00 5.93 3.67 8.88 2.11 4.80 17.45 0.00 11.45 12.21 46 ER6a ExonRegion 0 3.01 10.19 12.67 7.48 12.33 18.00 24.55 7.46 4.52 7.78 4.94 7.25 4.84 1.94 1.45 3.30 7.28 1.02 7.44 25.05 0.69 4.26 6.74 47 E6_Da NovelBoundary 0 7.41 9.27 16.41 23.41 60.78 13.46 29.37 15.61 14.73 12.54 10.48 13.95 18.18 7.42 0.00 0.00 12.62 0.00 9.60 32.98 0.00 5.82 8.71 48 E6_Db NovelBoundary 0 3.56 14.47 21.23 6.19 19.35 5.62 46.99 19.43 28.79 9.13 7.42 0.00 6.82 2.47 0.00 16.06 17.77 6.47 13.27 41.80 8.09 8.57 0.00 49 ER6b ExonRegion 0 1.50 3.28 3.83 4.31 11.05 3.49 9.69 2.84 4.66 1.81 4.43 8.38 4.69 3.51 0.00 0.00 4.90 0.00 4.11 9.61 0.00 1.41 4.45 50 I6 Intron 0 4.62 13.48 5.27 10.06 21.39 29.60 21.27 11.15 13.28 19.78 2.03 6.90 5.08 0.89 1.12 1.97 3.73 6.79 7.08 24.06 0.95 7.96 3.66 51 I6_SR1 SilentIntronRegion 0 3.74 13.56 3.22 7.17 21.50 16.55 24.94 11.62 10.83 17.06 4.93 7.59 11.31 2.10 2.01 2.91 3.88 5.59 10.00 16.68 0.43 7.36 4.61 52 I6_SR2 SilentIntronRegion 0 4.82 14.24 6.16 11.56 22.92 35.38 21.09 11.69 14.91 22.09 1.43 7.29 3.82 0.62 0.97 1.88 4.00 7.67 6.88 27.82 1.16 8.78 3.56 53 ER7a ExonRegion 0 24.34 63.07 35.60 54.15 105.69 149.67 76.99 87.03 98.64 126.39 11.95 16.31 17.74 19.92 50.92 36.90 75.70 80.99 88.39 153.72 17.45 24.17 35.63 54 E7_Ab KnownBoundary 1 54.68 99.98 34.71 76.98 149.83 206.64 148.43 96.44 124.85 132.48 8.95 6.30 0.00 26.96 57.11 39.56 110.99 74.04 114.45 205.94 23.35 33.43 52.67 55 ER7b ExonRegion 0 10.39 70.91 48.17 55.15 83.37 120.13 68.88 91.64 129.53 170.05 19.97 22.44 22.37 16.54 22.94 28.94 52.17 68.21 64.49 127.26 14.38 29.23 19.70 56 E7_Da KnownBoundary 1 18.15 130.57 91.92 115.77 220.97 292.84 212.47 166.19 186.02 253.79 16.58 88.53 55.84 27.49 29.05 55.46 77.14 90.41 100.14 237.39 23.04 56.15 38.84 57 ER7c ExonRegion 0 13.97 79.57 67.62 65.55 96.38 167.48 104.28 107.04 126.04 149.37 18.14 31.44 32.02 15.09 15.25 24.86 49.87 59.06 65.20 135.88 12.44 31.97 20.35 58 E7_Db KnownBoundary 0 9.71 123.99 179.35 152.26 231.75 243.95 162.78 202.13 204.19 254.68 27.22 46.52 33.60 34.14 31.03 19.31 39.27 73.37 115.49 273.57 8.46 63.56 35.00 59 E7b_E8a KnownJunction 0 0.00 0.00 0.00 0.00 7.13 10.68 0.00 0.00 4.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.58 0.00 0.00 0.00 3.24 60 ER7d ExonRegion 0 95.92 281.03 224.40 208.69 307.66 360.20 162.89 210.31 161.95 233.78 22.89 32.05 27.22 21.42 40.21 49.67 51.75 135.04 125.47 207.00 32.97 50.36 48.68 61 ER7e ExonRegion 0 6.77 18.30 4.17 4.09 2.68 9.17 5.30 1.38 1.48 6.88 0.00 0.00 0.00 0.00 1.16 1.78 0.00 0.74 1.27 6.81 0.00 0.00 0.00 62 I7_SR1 SilentIntronRegion 0 8.56 12.57 7.26 5.98 43.61 9.61 14.35 1.37 3.50 2.29 0.00 1.94 0.00 0.00 0.00 0.00 0.00 0.72 4.52 20.96 0.00 0.00 0.00 63 ER8a ExonRegion 0 0.00 0.00 0.00 0.74 1.42 4.36 0.00 0.93 2.94 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.27 0.00 0.00 0.74 1.10 64 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 1.64 8.84 0.00 0.00 1.85 2.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 67 ER10a ExonRegion 0 0.00 0.00 0.00 0.11 0.00 0.29 0.07 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 69 ER11a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 71 ER12a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 72 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 73 ER13a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 74 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 75 ER14a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 76 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 77 ER15a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 78 E15a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 79 ER16a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 80 E16a_E17a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 81 ER17a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 82 E17a_E18a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 83 ER18a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00