Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C17orf76 Gene 0 18.90 25.20 31.95 28.53 23.96 106.14 23.75 28.98 27.27 28.96 4.49 9.26 4.13 3.62 8.29 10.67 7.94 56.27 22.35 32.95 12.24 9.52 17.01 2 325618 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 409083 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 470794 Transcript 0 0.00 4.70 9.39 1.61 2.16 45.12 2.83 17.13 21.90 17.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49.66 0.00 5.85 6.89 7.38 3.97 5 409887 Transcript 0 5.36 8.54 7.37 9.54 5.00 14.57 5.37 6.78 4.33 6.37 2.22 2.65 1.43 1.20 3.76 4.50 3.20 15.54 7.02 10.65 3.71 2.82 6.37 6 IG28_SR3 SilentIntergenicRegion 0 2.61 38.96 5.08 10.55 17.04 29.84 12.54 14.47 10.05 16.39 0.10 2.29 0.21 0.50 0.16 0.32 0.53 1.67 1.53 10.47 1.06 2.57 0.00 7 IG28_AR3 ActiveIntergenicRegion 0 6.61 23.05 17.63 25.84 26.16 26.60 8.95 17.46 10.22 25.74 0.82 1.01 1.64 0.95 1.93 0.55 0.00 3.07 4.96 13.04 1.97 2.42 0.83 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 8.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.07 0.00 0.00 1.67 0.00 0.00 10 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 21.64 2.16 2.38 1.68 2.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.53 0.00 0.00 0.00 0.00 0.00 11 ER1c ExonRegion 0 0.00 0.76 2.49 1.17 1.95 11.78 1.07 2.15 5.75 7.19 0.00 0.06 0.58 0.00 0.00 0.00 1.23 14.04 1.66 1.13 1.86 0.65 0.60 12 E1a_E2a KnownJunction 0 0.00 0.00 3.10 6.96 0.00 31.12 5.92 7.48 18.26 21.19 0.00 0.00 7.79 0.00 0.00 0.00 0.00 47.55 4.33 3.13 3.15 3.12 8.71 13 I1 Intron 0 3.36 5.41 7.58 16.44 11.62 10.29 4.80 5.16 7.02 5.65 1.44 1.24 0.40 0.47 0.49 0.57 0.67 8.00 10.06 6.58 2.08 1.58 2.07 14 I1_AR3 ActiveIntronRegion 0 2.13 8.19 9.80 39.52 26.48 7.38 5.55 7.77 6.48 10.90 0.00 0.00 0.00 0.27 0.00 0.00 0.00 10.30 9.08 4.64 2.22 1.75 1.97 15 I1_SR4 SilentIntronRegion 0 2.99 6.78 8.60 25.01 18.86 14.39 4.78 11.81 7.45 8.94 0.16 0.58 0.00 0.52 0.33 0.00 0.00 11.13 10.68 3.73 1.42 1.68 2.74 16 I1_AR4 ActiveIntronRegion 0 3.64 5.22 8.55 27.72 12.56 10.61 3.96 6.31 7.74 10.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.43 13.94 4.12 2.34 0.55 4.25 17 I1_AR7 ActiveIntronRegion 0 2.70 4.23 2.66 16.49 14.15 9.66 5.73 6.89 9.38 4.46 0.00 2.23 0.00 0.00 0.00 2.02 0.00 5.91 15.59 3.32 3.34 0.31 1.71 18 I1_AR9 ActiveIntronRegion 0 21.25 39.11 61.24 138.49 74.86 62.21 28.62 35.65 41.25 25.21 6.03 4.58 1.74 2.67 4.68 2.36 2.06 18.92 42.11 26.56 7.13 10.28 8.00 19 I1_SR7 SilentIntronRegion 0 13.16 26.06 26.41 60.55 60.08 59.32 21.66 14.38 21.95 19.73 9.56 6.53 0.59 4.46 2.86 2.26 7.12 34.38 66.27 24.56 14.82 9.52 10.44 20 I1_AR11 ActiveIntronRegion 0 11.27 25.06 19.29 48.54 51.29 63.81 19.29 12.90 27.29 20.33 11.40 5.95 3.21 1.75 0.62 2.98 3.64 26.57 55.43 24.62 10.74 8.77 9.73 21 I1_AR12 ActiveIntronRegion 0 1.67 16.00 6.27 16.80 6.54 5.47 5.53 4.53 8.63 5.32 1.05 5.32 1.92 0.99 0.00 1.56 0.70 5.27 9.76 6.14 3.76 1.91 1.59 22 I1_SR9 SilentIntronRegion 0 6.40 7.59 9.49 14.69 14.54 11.72 9.54 4.76 7.76 8.94 3.45 5.84 1.70 0.98 0.14 1.09 1.53 11.52 13.21 9.78 2.80 2.56 1.41 23 E2_Aa NovelBoundary 0 0.00 0.00 14.61 18.81 7.39 8.57 7.77 6.16 4.72 3.04 2.53 0.00 0.00 0.00 0.00 0.00 4.77 16.75 31.34 10.48 2.59 2.82 0.00 24 ER2a ExonRegion 0 4.18 7.31 8.99 14.79 7.51 65.70 4.37 9.79 20.62 26.52 2.29 2.99 0.62 2.04 2.47 2.35 1.31 63.34 5.33 19.10 7.99 4.85 8.40 25 E2_Da NovelBoundary 0 0.00 0.00 18.60 7.89 4.33 10.11 3.62 0.00 14.67 8.89 2.11 0.00 0.00 2.18 0.00 0.00 4.77 17.66 12.89 14.32 8.34 5.76 6.66 26 E2a_E3b KnownJunction 0 0.00 0.00 7.48 3.23 0.00 54.17 2.25 6.57 17.48 11.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44.56 0.00 11.70 5.50 5.45 4.10 27 E2a_E5a KnownJunction 0 0.00 0.00 0.00 3.56 0.00 10.68 0.00 0.00 1.65 4.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.81 0.00 0.00 0.00 2.45 0.00 28 E3_Aa NovelBoundary 0 3.63 31.77 25.46 30.50 7.05 16.13 25.00 17.33 9.40 12.95 2.68 6.15 0.00 9.48 0.00 4.36 4.77 26.90 9.32 22.88 6.05 3.00 8.19 29 ER3a ExonRegion 0 6.44 16.94 16.16 19.64 11.34 24.32 9.33 14.25 10.19 17.05 3.53 5.36 4.30 3.32 7.35 3.17 2.51 33.98 17.27 25.42 10.83 3.50 12.54 30 E3_Ab KnownBoundary 0 0.00 16.64 18.83 10.62 10.70 42.82 9.76 9.00 10.21 20.95 2.00 12.15 7.95 0.00 10.75 0.00 0.00 40.58 4.80 18.92 2.47 0.00 0.00 31 ER3b ExonRegion 0 6.99 9.27 15.45 13.00 9.21 50.39 10.58 18.20 24.50 28.23 3.45 1.77 4.49 1.77 5.85 2.64 4.39 59.74 9.00 27.53 11.54 3.95 9.50 32 E3_Da NovelBoundary 0 10.30 13.29 25.04 17.81 8.06 19.31 1.99 10.72 8.30 10.26 0.00 5.85 5.84 0.00 5.19 0.00 0.00 28.77 17.98 13.49 12.48 0.00 8.71 33 E3a_E4a KnownJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 0.00 0.00 0.00 0.00 34 E3a_E5a KnownJunction 0 0.00 9.41 11.29 0.00 4.33 36.06 3.40 27.68 26.33 23.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54.76 0.00 0.00 8.28 9.31 3.84 35 E4_Aa NovelBoundary 0 11.04 3.16 29.04 31.13 7.47 5.34 0.00 9.32 14.64 16.95 4.37 0.00 6.66 2.24 4.33 8.12 13.93 46.43 39.34 25.95 6.30 3.12 3.67 36 ER4a ExonRegion 0 2.52 4.78 7.95 10.88 4.49 11.96 6.66 5.75 4.93 5.09 0.65 0.00 0.00 0.00 6.95 8.98 5.54 22.66 8.55 16.32 1.48 4.35 15.77 37 E4_Da NovelBoundary 0 2.82 3.35 16.03 37.22 7.47 5.00 15.19 4.39 10.33 11.79 2.63 6.30 0.00 0.00 10.51 11.71 4.77 9.66 17.88 21.48 3.15 3.12 8.11 38 E4a_E5a KnownJunction 0 0.00 0.00 0.00 1.70 0.00 8.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.32 0.00 2.62 0.00 2.57 0.00 39 E5_Aa NovelBoundary 0 10.59 17.37 24.25 43.42 4.33 2.90 14.13 21.03 9.09 14.42 2.58 0.00 0.00 4.94 23.73 8.72 8.79 68.61 24.66 26.21 8.09 2.88 12.46 40 ER5a ExonRegion 0 12.06 21.19 38.49 29.83 15.40 100.84 22.46 34.59 34.99 36.76 2.97 5.56 2.85 3.75 8.45 11.50 7.47 93.44 24.48 41.94 14.11 12.32 20.86 41 E5_Da KnownBoundary 0 24.82 54.66 73.06 43.35 39.05 246.62 32.15 45.76 64.00 46.90 5.21 5.85 12.82 4.94 4.45 11.36 9.07 102.06 37.27 50.17 27.37 23.57 20.49 42 ER5b ExonRegion 0 39.74 45.86 55.45 48.96 51.62 212.41 46.15 50.14 45.36 44.92 7.27 18.96 7.53 5.94 13.55 17.65 13.45 71.90 38.66 52.01 18.77 15.92 27.59 43 E5_Db KnownBoundary 0 31.41 188.52 1.48 9.72 54.92 66.10 16.03 0.00 1.30 4.84 19.85 0.00 0.00 0.00 5.69 31.87 12.90 1.87 17.04 15.21 2.78 30.80 3.93 44 ER5c ExonRegion 0 14.04 21.01 12.74 15.51 9.15 27.94 10.84 11.95 6.55 9.71 6.91 7.90 2.88 2.67 4.48 10.35 7.95 8.61 9.29 8.86 6.26 3.69 3.55