Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C17orf39 Gene 0 31.08 43.66 48.26 29.56 45.11 61.64 27.94 26.86 24.41 35.80 22.20 35.33 33.96 30.95 26.77 26.49 25.64 22.66 21.32 25.75 33.79 37.31 35.25 2 268719 Transcript 0 22.00 29.42 32.24 19.87 30.90 43.97 18.71 17.94 16.23 23.75 16.59 18.99 20.33 20.05 15.93 17.45 16.38 13.90 16.06 16.08 23.70 25.17 23.49 3 376345 Transcript 0 3.88 9.38 3.50 2.03 4.66 4.30 5.22 1.10 1.46 1.31 3.33 5.85 8.17 4.03 9.87 5.16 4.75 3.97 3.90 6.17 5.33 2.55 5.35 4 459843 Transcript 0 4.43 4.93 4.99 6.85 4.37 15.74 7.57 3.29 2.64 4.27 0.47 2.16 1.89 3.47 1.86 4.66 2.43 4.92 4.96 6.07 2.44 1.06 0.78 5 481836 Transcript 0 0.00 1.53 1.84 0.00 5.67 0.00 0.00 0.00 0.00 0.00 0.48 3.15 0.00 0.00 3.63 0.00 0.00 0.00 0.00 0.00 2.03 0.52 0.00 6 ER1a ExonRegion 0 0.00 0.36 0.56 0.00 0.00 1.73 0.09 0.00 0.00 2.84 6.24 0.84 2.87 3.47 0.08 4.21 4.68 1.66 6.75 1.51 6.48 2.44 2.86 7 E1_Ab KnownBoundary 0 0.00 5.46 1.54 0.00 0.00 0.00 1.68 0.00 0.00 6.12 7.21 0.00 0.00 6.71 0.00 3.59 0.00 10.82 8.28 0.00 5.62 5.27 3.76 8 ER1b ExonRegion 0 4.77 14.76 16.55 5.15 7.00 11.28 5.68 7.94 5.66 16.05 8.17 8.17 4.92 18.73 15.40 9.70 11.88 11.69 13.11 14.61 20.38 9.40 13.86 9 E1a_E2a KnownJunction 1 8.89 61.90 55.88 10.12 33.87 32.14 18.59 23.37 17.62 33.71 8.05 50.12 14.12 37.44 28.06 11.19 40.39 24.50 4.61 37.97 35.21 41.88 19.38 10 ER2a ExonRegion 0 23.28 47.25 72.95 24.12 36.93 32.15 14.10 30.51 23.63 57.54 22.42 44.23 35.18 43.69 33.32 33.39 49.46 31.04 12.21 33.55 44.59 40.59 37.10 11 E2a_E3a KnownJunction 0 23.34 54.92 124.09 35.29 31.07 72.63 23.85 42.55 41.78 83.25 39.22 57.77 19.64 48.38 61.07 41.19 80.50 34.28 20.80 34.20 63.94 30.43 63.68 12 E3_Ab NovelBoundary 0 18.45 33.09 68.48 29.93 22.07 69.62 24.51 30.81 30.53 50.34 17.11 18.01 0.00 33.26 14.71 34.78 27.12 22.34 18.73 40.91 32.56 20.08 20.66 13 ER3a ExonRegion 0 36.40 50.84 100.73 42.66 35.86 88.02 36.94 43.21 34.58 78.79 46.97 47.19 14.07 56.36 42.94 53.50 69.98 41.20 38.86 50.85 65.89 39.59 65.19 14 ER3b ExonRegion 0 42.15 53.55 98.64 43.50 46.83 95.82 51.30 40.33 34.89 75.12 56.54 38.60 14.46 65.24 41.83 56.22 56.94 31.87 48.58 55.67 70.52 38.02 61.67 15 ER3c ExonRegion 0 35.41 59.99 97.12 47.75 48.41 54.48 34.87 54.73 45.37 81.64 49.24 89.36 104.00 76.39 38.56 52.91 70.12 45.10 32.04 50.62 51.45 71.15 53.75 16 E3b_E4b KnownJunction 0 0.00 8.81 4.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 17 E3b_E5a KnownJunction 0 48.16 79.99 48.99 45.72 35.99 52.41 39.17 62.15 44.21 63.50 59.91 139.25 104.05 64.57 43.76 61.35 53.76 34.70 12.52 49.60 47.14 116.47 44.90 18 ER4a ExonRegion 0 0.00 3.05 1.84 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.97 0.00 0.00 0.00 7.25 0.00 0.00 0.00 0.00 0.00 1.10 1.04 0.00 19 ER4b ExonRegion 0 0.00 4.39 4.77 2.41 5.83 2.95 1.21 0.65 0.00 1.04 0.52 0.39 1.34 0.67 9.84 2.23 3.01 0.89 2.73 4.75 2.95 3.83 1.15 20 E4_Da KnownBoundary 0 0.00 0.00 8.10 3.83 4.07 8.69 0.00 1.85 0.00 1.56 0.00 0.00 6.82 2.47 0.00 8.03 0.00 2.40 9.41 7.86 0.00 0.00 4.35 21 E4a_E5a KnownJunction 0 0.00 0.00 1.83 0.00 8.66 0.00 0.00 0.00 0.00 0.00 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.00 22 ER4c ExonRegion 0 7.77 9.95 2.68 4.05 9.32 8.61 10.43 2.19 2.92 2.63 4.18 11.70 16.34 8.05 19.74 10.31 9.51 7.94 7.80 12.34 8.25 5.10 10.70 23 E5_Aa NovelBoundary 0 2.89 12.50 10.85 1.23 0.00 2.21 4.11 1.89 4.37 3.25 0.00 0.00 0.00 2.47 0.00 3.42 13.46 1.66 0.00 8.69 2.35 0.00 0.00 24 ER5a ExonRegion 0 17.06 56.26 72.27 42.05 61.33 69.45 30.06 41.38 33.99 63.60 57.51 134.21 75.55 48.96 34.19 53.64 65.60 39.29 29.01 36.19 56.93 72.11 66.59 25 E5_Da NovelBoundary 0 13.71 30.65 14.25 15.02 30.31 14.25 14.18 6.86 9.14 12.60 0.00 0.00 0.00 7.06 4.45 8.03 4.30 18.82 17.13 17.71 5.50 2.57 0.00 26 E5a_E6a KnownJunction 0 6.67 57.36 87.25 50.28 33.28 62.75 23.01 34.67 33.85 78.79 43.75 94.08 48.05 52.62 31.15 58.70 87.80 44.89 44.61 36.43 49.05 33.62 54.21 27 E5a_E7a NovelJunction 0 0.00 0.00 13.19 3.80 0.00 0.00 0.00 2.01 1.68 6.23 0.00 0.00 0.00 2.47 0.00 7.26 8.79 1.99 0.00 0.00 0.00 2.33 6.91 28 I5_SR1 SilentIntronRegion 0 9.91 11.87 11.97 8.86 13.80 11.69 6.60 11.61 5.48 10.19 3.52 6.10 7.35 4.60 3.78 7.91 3.40 15.57 10.06 10.47 6.71 2.31 6.07 29 ER6a ExonRegion 1 20.11 49.61 65.65 38.97 59.81 55.56 25.61 42.53 34.40 73.71 40.81 117.85 105.26 61.93 30.08 61.87 62.94 48.42 39.71 39.29 69.90 64.92 61.76 30 E6_Da KnownBoundary 0 3.56 6.45 7.07 3.90 13.33 0.00 5.48 4.56 1.16 2.63 0.00 5.85 0.00 2.12 4.45 4.36 0.00 2.16 4.61 6.01 3.15 0.00 0.00 31 E6a_E7a KnownJunction 0 39.12 68.80 79.15 63.53 25.30 43.67 14.00 33.80 37.04 61.49 41.59 128.59 53.89 62.33 42.28 51.18 65.45 59.11 66.64 45.00 60.60 87.01 67.27 32 ER6b ExonRegion 0 4.43 4.93 4.99 6.85 4.37 15.74 7.57 3.29 2.64 4.27 0.47 2.16 1.89 3.47 1.86 4.66 2.43 4.92 4.96 6.07 2.44 1.06 0.78 33 E6_Db NovelBoundary 0 28.45 0.00 16.71 12.92 28.78 9.48 3.62 1.89 6.19 5.94 0.00 0.00 0.00 2.47 0.00 0.00 0.00 4.19 23.34 5.82 2.90 0.00 3.76 34 I6_AR1 ActiveIntronRegion 0 12.54 11.63 6.84 5.39 12.02 8.74 8.75 6.66 4.13 5.71 3.82 6.49 6.92 4.23 2.07 2.43 3.82 6.07 4.55 8.55 1.64 2.98 1.80 35 E7_Aa NovelBoundary 1 5.85 11.64 16.94 14.35 7.39 21.29 19.74 7.64 5.09 4.84 1.95 38.71 0.00 12.48 4.45 7.26 8.42 12.81 8.75 15.85 0.00 5.63 0.00 36 ER7a ExonRegion 1 30.87 53.95 68.33 43.14 50.48 79.05 35.11 27.90 43.26 62.66 40.00 116.48 74.54 68.43 39.22 53.78 55.32 62.40 47.41 41.80 68.25 74.47 59.66 37 E7_Da KnownBoundary 0 52.45 85.84 46.10 31.46 132.51 151.22 51.14 31.09 43.40 42.58 50.91 82.08 77.27 58.98 43.27 69.21 74.71 55.01 52.80 58.80 71.91 72.50 47.21 38 ER7b ExonRegion 0 44.00 58.48 63.91 39.73 61.80 86.21 37.33 35.87 32.47 44.67 26.94 37.14 37.80 36.63 31.79 30.69 28.09 26.14 25.36 30.65 40.92 47.90 44.12