Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PEMT Gene 0 19.79 42.50 102.74 61.25 29.07 83.04 21.91 57.95 39.09 73.24 63.32 16.08 18.05 38.30 63.42 32.63 25.20 119.28 125.39 57.48 86.66 72.61 93.35 2 343219 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 395781 Transcript 0 0.00 2.96 3.46 5.49 0.00 2.33 0.00 4.23 1.39 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 472446 Transcript 0 0.00 0.00 1.27 1.53 0.00 2.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.94 0.00 0.00 0.00 4.42 0.00 6.12 0.00 4.35 5 461404 Transcript 0 0.00 0.00 0.00 0.00 0.81 0.00 0.00 0.00 0.01 0.03 0.00 0.00 0.00 0.00 0.02 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 255389 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 435340 Transcript 0 0.00 0.25 3.28 3.08 8.92 1.15 0.17 2.30 2.24 2.98 0.00 0.00 0.00 2.25 0.00 0.00 0.00 2.32 0.00 4.77 0.00 0.00 3.52 8 421096 Transcript 0 0.00 0.00 0.00 0.80 0.00 2.34 1.13 0.00 0.00 0.00 0.81 0.00 0.00 0.57 0.82 0.00 0.00 2.01 1.35 1.81 0.92 2.62 2.47 9 395783 Transcript 0 0.65 0.63 0.28 0.00 0.00 0.00 0.00 0.00 0.28 0.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.34 0.00 0.45 10 395782 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.02 0.00 0.00 0.00 0.00 0.00 11 448294 Transcript 0 0.47 1.13 5.79 3.10 1.34 2.45 0.51 3.94 1.85 5.99 8.05 0.48 0.52 1.71 2.10 1.49 4.95 5.44 7.43 3.55 7.10 3.01 3.26 12 490392 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.10 0.00 0.00 5.80 0.00 0.63 0.00 0.00 0.00 0.00 0.00 0.02 1.04 0.00 0.00 13 484838 Transcript 0 0.32 0.31 0.28 0.00 0.02 0.83 0.20 1.06 7.10 3.29 0.00 0.00 0.00 0.00 0.00 0.45 0.00 4.02 4.83 1.61 1.33 0.63 3.10 14 482906 Transcript 0 0.00 1.23 1.63 2.47 0.81 1.11 0.40 0.78 0.00 0.99 1.77 0.00 0.00 1.29 1.45 1.80 3.01 0.00 1.93 0.65 2.01 0.63 1.78 15 477595 Transcript 0 0.75 1.44 0.60 0.00 1.90 1.95 1.88 0.00 0.00 0.00 0.68 0.00 1.37 0.00 0.00 0.00 0.00 0.65 1.13 0.00 2.26 1.48 2.08 16 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.53 0.00 0.00 0.00 0.96 1.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.65 1.77 1.84 0.00 2.45 17 ER1b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.83 2.21 0.00 0.00 1.15 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.19 2.13 2.20 0.00 2.94 18 ER1c ExonRegion 0 4.43 4.94 4.32 2.21 8.66 38.16 15.45 2.80 4.59 7.05 10.77 0.00 0.00 8.66 7.18 8.21 2.67 12.05 27.76 11.85 13.12 14.88 24.47 19 E1_Ae KnownBoundary 1 153.88 231.74 87.79 91.70 112.14 398.69 141.94 45.26 53.65 110.16 144.72 0.00 13.31 47.50 177.02 217.89 70.59 311.94 424.11 98.24 122.38 132.33 306.11 20 ER1d ExonRegion 1 54.23 91.02 38.37 27.63 41.52 206.21 67.98 17.17 24.02 50.50 87.38 0.00 4.85 38.19 82.54 109.05 34.15 84.81 219.02 47.62 72.95 84.71 153.11 21 ER1e ExonRegion 1 47.72 115.72 77.27 44.62 38.52 192.48 57.06 39.33 33.46 76.19 71.55 0.82 9.82 27.12 70.78 67.18 41.48 128.92 210.11 63.51 79.13 58.02 153.04 22 E1_Da KnownBoundary 1 30.67 103.99 79.39 35.33 24.45 168.31 49.37 45.96 20.95 52.11 58.91 0.00 6.82 22.37 38.94 11.96 0.00 111.39 191.63 60.21 66.66 36.74 120.53 23 E1a_E4b KnownJunction 0 0.00 0.00 4.11 1.53 12.82 5.56 1.81 6.33 3.24 4.94 2.58 0.00 0.00 0.00 0.00 0.00 4.77 3.94 27.48 6.07 5.50 2.33 0.00 24 ER1f ExonRegion 0 14.53 55.83 89.21 42.08 19.01 108.44 24.27 49.52 21.35 70.93 63.58 6.49 8.03 16.59 46.42 17.52 14.60 112.94 160.28 66.41 93.69 51.96 95.62 25 E1b_E4b KnownJunction 1 0.00 23.29 112.44 58.90 25.21 42.93 11.79 70.36 29.34 100.65 134.93 6.30 14.28 34.67 54.39 37.68 65.73 82.37 101.18 69.29 126.15 26.15 49.77 26 E2_Aa NovelBoundary 0 0.00 6.38 1.77 3.50 0.00 2.50 16.30 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.01 27 ER2a ExonRegion 0 1.31 1.26 0.56 0.00 0.00 0.00 0.00 0.00 0.57 0.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.68 0.00 0.91 28 E2a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.04 0.00 0.00 0.00 0.00 0.00 30 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E4_Ab NovelBoundary 0 11.26 0.00 3.67 0.00 0.00 0.00 0.00 2.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.18 8.82 8.62 32 ER4a ExonRegion 0 0.47 1.13 5.79 3.10 1.34 2.45 0.51 3.94 1.85 5.99 8.05 0.48 0.52 1.71 2.10 1.49 4.95 5.44 7.43 3.55 7.10 3.01 3.26 33 ER4b ExonRegion 0 11.29 15.55 139.17 92.69 25.58 62.50 13.05 76.47 50.51 122.58 111.51 17.08 24.28 54.64 115.37 67.91 50.22 263.71 281.00 91.39 143.71 98.55 201.09 34 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 E4a_E6a KnownJunction 0 15.93 27.36 206.70 102.98 113.41 174.67 29.46 121.00 76.39 142.48 101.76 17.71 32.79 81.99 113.85 41.36 39.18 302.73 293.37 136.46 183.42 111.08 230.91 36 E4a_E9a KnownJunction 0 0.00 0.00 1.27 1.53 0.00 2.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.94 0.00 0.00 0.00 4.42 0.00 6.12 0.00 4.35 37 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 2.44 0.00 0.00 0.00 0.02 0.10 0.00 0.00 0.00 0.00 0.05 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 ER6a ExonRegion 0 12.28 56.50 171.43 98.06 90.19 231.03 64.78 120.63 68.23 133.28 103.24 24.78 33.84 70.93 111.50 43.74 43.40 255.67 212.38 125.37 155.29 143.12 186.35 40 E6a_E9a KnownJunction 0 10.00 140.90 241.74 143.74 45.25 259.68 74.81 146.88 97.86 180.70 65.33 18.91 33.76 65.34 88.39 36.66 43.20 234.21 123.20 108.02 138.69 124.00 121.04 41 E7_Aa NovelBoundary 0 12.00 2.70 7.51 1.66 10.53 0.00 0.00 5.22 3.79 3.98 7.37 5.25 0.00 4.83 0.00 7.95 0.00 23.55 8.94 23.39 13.41 2.57 12.63 42 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.57 0.00 0.00 5.29 0.00 1.26 0.00 0.00 0.00 0.00 0.00 0.04 2.08 0.00 0.00 43 E7a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER8a ExonRegion 0 0.64 0.61 0.55 0.00 0.03 1.66 0.40 0.24 5.04 2.72 0.00 0.00 0.00 0.00 0.00 0.90 0.00 8.05 9.67 3.22 2.66 1.26 6.20 45 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.89 9.17 3.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 ER9a ExonRegion 0 44.48 115.01 207.86 107.76 36.30 136.22 32.01 130.00 90.82 159.87 139.25 31.84 26.51 93.45 137.94 54.83 54.45 240.99 201.29 122.53 182.02 125.81 158.54 47 E9_Da NovelBoundary 0 19.56 24.60 112.71 60.60 6.45 27.77 7.07 59.19 46.27 77.36 53.65 5.70 17.69 23.60 31.77 12.90 17.67 125.85 63.91 60.47 69.81 53.27 64.19 48 E9b_E11a KnownJunction 0 131.88 127.54 254.22 172.01 62.90 128.05 32.55 149.76 114.87 159.13 165.41 45.61 47.40 168.99 177.51 36.91 83.96 303.73 230.88 141.83 172.36 159.45 182.51 49 ER9b ExonRegion 0 90.16 93.14 223.51 147.74 47.09 93.52 22.77 133.78 106.47 156.44 152.70 43.29 39.40 159.16 167.11 51.12 75.26 324.10 232.53 131.49 182.91 146.26 182.07 50 ER10a ExonRegion 0 0.00 2.47 3.27 4.93 1.62 2.23 0.80 1.56 0.00 1.98 3.54 0.00 0.00 2.57 2.90 3.61 6.01 0.00 3.87 1.29 4.01 1.26 3.57 51 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 E11_Aa NovelBoundary 0 0.00 0.00 8.99 0.00 8.32 17.26 1.85 2.46 5.27 13.73 2.68 0.00 0.00 3.00 0.00 4.36 4.77 39.13 0.00 8.05 11.55 5.76 8.37 53 ER11a ExonRegion 0 69.96 140.86 253.17 151.83 67.13 194.60 48.01 163.26 102.39 177.60 165.80 35.52 28.52 94.53 159.13 69.47 62.16 297.34 217.20 137.08 207.80 164.91 151.34 54 E11_Da NovelBoundary 0 2.89 24.40 11.56 28.30 10.53 27.14 4.50 18.11 1.79 7.68 7.74 0.00 0.00 7.12 8.78 3.50 8.70 13.76 14.21 15.34 5.37 5.39 7.51 55 E11a_E12a KnownJunction 0 0.00 0.00 0.00 1.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.45 0.00 0.00 0.00 0.00 0.00 56 E11a_E13a KnownJunction 0 0.00 0.00 3.49 2.06 12.48 0.00 0.00 2.01 1.71 1.67 0.00 0.00 0.00 2.06 0.00 0.00 0.00 2.32 0.00 5.82 0.00 0.00 4.10 57 E11a_E13b KnownJunction 0 0.00 2.96 3.46 5.49 0.00 2.33 0.00 4.23 1.39 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 E11a_E15a KnownJunction 1 51.27 83.41 275.63 132.45 146.18 367.80 96.05 169.23 72.08 148.90 172.41 24.61 12.66 88.12 115.95 90.75 39.93 292.83 213.37 107.70 205.16 146.65 183.10 59 I11 Intron 0 1.70 9.23 9.26 10.30 8.22 17.38 5.83 10.32 5.41 9.13 4.90 3.33 1.25 5.65 4.03 2.38 2.20 15.09 9.36 8.24 8.83 9.74 9.02 60 I11_SR1 SilentIntronRegion 0 1.83 10.97 8.89 12.65 10.05 20.77 8.76 12.42 4.38 11.85 4.06 2.07 1.36 4.47 4.24 5.05 3.88 16.82 11.76 8.23 7.29 12.07 10.53 61 I11_AR1 ActiveIntronRegion 0 2.82 16.07 12.13 15.49 11.24 27.75 4.19 23.80 7.41 17.78 7.60 2.89 4.69 10.56 14.31 0.10 3.30 23.16 5.95 13.05 17.12 15.77 11.75 62 E12_Aa NovelBoundary 0 13.78 12.56 14.19 29.70 35.99 10.73 11.26 12.36 7.70 15.50 2.68 6.30 0.00 5.47 4.45 7.69 0.00 15.84 25.32 5.62 17.73 8.88 8.37 63 ER12a ExonRegion 0 0.00 0.00 0.00 0.23 0.00 4.68 2.25 0.00 0.00 0.00 1.61 0.00 0.00 1.14 1.64 0.00 0.00 1.57 2.71 3.62 1.84 5.24 4.94 64 E12_Da NovelBoundary 0 10.22 18.48 13.19 26.34 15.87 29.76 4.50 12.32 8.97 24.71 10.27 0.00 6.82 11.42 13.85 11.88 7.95 21.76 28.80 15.02 19.52 18.86 10.76 65 I12 Intron 0 4.69 7.32 19.77 19.56 6.80 14.53 5.63 14.22 8.29 11.43 6.53 2.65 3.04 5.96 5.57 3.46 4.44 21.76 12.03 10.75 10.00 11.74 10.88 66 I12_SR1 SilentIntronRegion 0 9.45 11.41 33.06 32.24 14.62 20.64 6.73 22.62 13.97 21.86 7.98 5.35 4.75 8.12 9.14 5.78 6.13 32.12 18.23 14.47 11.92 20.49 13.71 67 I12_AR2 ActiveIntronRegion 0 3.97 5.59 18.07 19.59 2.68 9.40 1.32 10.59 12.66 16.06 2.66 0.00 0.00 8.93 5.08 0.00 9.90 13.86 8.76 7.98 13.22 16.15 19.46 68 I12_AR3 ActiveIntronRegion 0 3.74 9.22 16.37 20.22 5.46 15.10 6.33 12.85 8.79 8.11 8.05 4.03 5.50 7.12 5.17 3.56 6.30 23.21 10.95 9.48 8.74 10.19 11.71 69 I12_SR3 SilentIntronRegion 0 2.01 1.09 14.39 13.55 3.30 8.61 3.92 16.52 5.41 7.32 6.28 0.00 1.84 4.92 3.88 1.42 2.13 13.09 6.31 6.60 10.14 9.43 8.41 70 I12_AR4 ActiveIntronRegion 0 3.39 4.90 19.38 17.01 2.92 15.54 5.14 12.60 5.52 8.50 6.19 0.00 0.75 3.73 5.85 3.16 4.13 19.31 10.85 10.02 12.22 9.95 10.41 71 I12_AR5 ActiveIntronRegion 0 2.12 6.63 14.84 22.56 9.32 12.84 5.10 10.95 6.77 13.64 7.59 0.00 0.00 6.20 1.83 3.30 0.00 15.95 13.45 16.31 16.73 11.19 15.88 72 I12_AR7 ActiveIntronRegion 0 1.63 6.10 15.55 6.08 7.20 17.07 5.30 13.69 9.12 13.15 1.93 0.00 0.00 6.50 2.68 2.97 3.81 21.32 13.97 14.73 0.51 7.05 3.84 73 I12_AR8 ActiveIntronRegion 0 3.08 2.96 23.39 7.68 7.78 16.50 4.57 13.36 6.62 11.05 2.46 0.00 0.00 4.87 0.00 1.89 6.60 20.16 13.61 12.96 1.20 8.90 5.87 74 ER13a ExonRegion 0 0.00 0.51 3.06 4.09 5.35 2.29 0.33 2.59 2.78 4.30 0.00 0.00 0.00 2.44 0.00 0.00 0.00 2.31 0.00 3.72 0.00 0.00 2.94 75 E13a_E15a KnownJunction 0 0.00 2.83 4.11 2.06 7.81 5.62 2.25 0.00 1.79 8.81 0.00 0.00 0.00 2.12 5.19 0.00 0.00 3.69 0.00 6.39 0.00 0.00 4.35 76 ER13b ExonRegion 0 0.00 2.30 5.19 6.00 5.17 4.03 1.50 3.46 3.42 8.22 0.00 0.00 0.00 1.30 2.03 0.00 0.00 1.91 0.00 4.47 0.00 0.14 5.78 77 E14_Aa NovelBoundary 0 0.00 6.51 22.97 30.50 4.33 8.01 3.49 7.23 9.23 11.74 4.69 0.00 0.00 0.00 4.45 0.00 0.00 14.63 7.62 5.43 5.25 2.88 15.79 78 ER14a ExonRegion 0 1.50 2.88 1.21 0.00 3.79 3.90 3.75 0.00 0.00 0.00 1.37 0.00 2.74 0.00 0.00 0.00 0.00 1.31 2.26 0.00 4.53 2.95 4.16 79 E14_Da NovelBoundary 0 10.00 13.02 25.46 19.41 11.97 28.17 6.49 4.97 1.77 8.95 4.42 0.00 0.00 19.31 4.45 0.00 9.16 19.19 9.60 9.78 6.30 13.59 0.00 80 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 81 I14 Intron 0 7.74 7.90 16.77 17.74 6.59 18.07 3.86 8.46 7.01 9.44 5.05 0.91 0.29 4.06 5.02 1.55 1.48 13.17 7.61 6.99 10.70 5.91 9.65 82 I14_SR1 SilentIntronRegion 0 7.95 8.11 17.25 18.30 6.74 18.51 3.98 8.76 7.12 9.68 5.15 0.94 0.30 4.16 5.16 1.61 1.53 13.59 7.88 7.23 10.91 6.12 9.98 83 E15_Aa NovelBoundary 0 2.96 2.43 23.36 33.13 22.84 15.50 4.28 20.45 7.29 14.32 2.16 0.00 0.00 6.47 4.45 4.36 17.30 26.82 11.48 11.51 11.74 15.06 12.72 84 ER15a ExonRegion 0 19.73 36.66 218.66 111.90 89.33 210.42 58.94 125.07 77.57 146.77 118.55 34.64 41.21 77.96 85.18 49.93 48.81 164.35 161.05 105.19 157.26 113.15 129.02 85 E15a_E16a KnownJunction 0 20.60 43.87 249.25 142.41 66.55 157.13 17.53 141.54 93.49 139.84 110.40 67.52 58.44 60.39 106.43 58.28 24.68 191.56 190.41 132.82 132.70 113.89 136.41 86 E16_Aa NovelBoundary 0 3.48 2.89 24.48 23.77 0.00 2.73 5.48 4.89 4.66 11.63 5.16 0.00 0.00 0.00 0.00 0.00 4.02 9.99 9.22 9.14 3.15 3.12 0.00 87 ER16a ExonRegion 0 11.54 33.90 221.55 137.82 22.07 56.35 10.79 111.12 77.65 138.49 101.97 35.87 38.10 66.19 118.66 59.47 39.42 176.40 215.69 99.50 157.84 159.90 157.33 88 E16_Da KnownBoundary 0 68.60 162.87 277.07 201.21 78.86 200.68 52.02 104.94 110.91 132.99 77.76 11.40 33.44 24.25 59.83 69.21 54.51 214.31 246.69 93.45 152.40 143.90 174.48 89 ER16b ExonRegion 0 117.25 162.44 202.29 150.96 123.27 276.00 81.61 67.48 60.13 100.52 114.57 60.38 82.81 77.71 117.92 72.63 37.98 244.84 364.79 77.44 165.04 180.70 255.89 90 ER16c ExonRegion 1 33.86 20.34 20.83 14.99 13.38 44.01 7.94 6.91 3.71 10.32 17.40 0.00 18.76 14.62 26.11 17.83 3.30 46.19 28.67 12.77 8.81 10.42 44.05 91 ER16d ExonRegion 0 9.52 7.12 4.29 4.09 1.34 13.75 1.32 2.59 0.62 2.29 1.93 0.00 0.00 2.44 4.35 2.97 1.65 10.16 0.00 1.06 2.20 2.08 8.81 92 IG4_SR4 SilentIntergenicRegion 0 0.92 5.39 2.48 1.77 1.04 6.95 0.19 3.71 11.47 1.92 0.00 0.00 0.56 0.19 0.60 0.00 0.00 5.94 3.24 2.93 7.93 1.91 2.79 93 IG4_AR4 ActiveIntergenicRegion 0 0.00 2.89 0.47 1.36 8.46 8.87 0.43 7.69 16.57 4.85 0.00 0.00 0.00 0.00 1.87 0.00 3.09 10.07 4.62 10.16 17.63 0.67 4.36