Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FLOT2 Gene 0 183.48 91.38 231.57 99.33 114.20 266.12 68.99 157.35 143.97 198.04 419.80 68.48 231.42 851.02 384.30 104.99 165.53 236.56 142.62 125.79 186.76 124.32 105.39 2 394910 Transcript 0 3.17 4.07 0.00 0.00 2.68 0.00 1.99 0.00 0.00 0.00 5.80 0.00 0.00 10.56 8.70 0.00 0.00 0.00 2.39 0.00 2.20 2.60 0.73 3 465427 Transcript 0 0.00 6.05 19.22 9.02 3.74 36.06 9.76 9.28 12.36 12.63 26.43 0.00 6.82 81.11 25.59 11.36 4.30 25.54 0.00 15.28 5.44 11.33 0.00 4 394908 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 394906 Transcript 0 2.95 3.25 0.88 0.93 4.85 6.35 3.52 1.15 2.52 4.15 5.28 0.82 6.97 14.60 10.53 0.00 3.02 5.47 2.94 3.95 3.03 2.38 1.35 6 ER1a ExonRegion 0 3.17 4.07 0.00 0.00 2.68 0.00 1.99 0.00 0.00 0.00 5.80 0.00 0.00 10.56 8.70 0.00 0.00 0.00 2.39 0.00 2.20 2.60 0.73 7 ER1b ExonRegion 1 52.91 36.58 22.81 6.41 29.78 185.71 29.06 9.90 17.06 42.61 114.70 1.32 23.12 128.59 110.42 39.41 50.56 44.54 63.86 21.05 85.45 30.27 40.77 8 E1_Ac KnownBoundary 1 87.27 99.98 72.68 32.86 82.85 412.04 67.26 61.16 59.43 122.52 203.42 6.30 26.95 302.43 195.93 55.80 62.65 169.54 81.70 82.84 102.49 40.05 51.05 9 ER1c ExonRegion 1 46.51 50.37 50.62 17.37 29.85 182.96 28.66 34.17 51.06 83.63 176.64 7.25 27.29 231.60 128.32 30.80 69.44 104.54 63.98 50.94 107.00 26.11 33.54 10 E1a_E2a KnownJunction 1 20.52 19.86 54.67 14.65 8.06 31.40 9.36 35.78 53.62 128.53 251.59 0.00 32.30 220.14 143.89 12.13 158.30 18.16 19.11 49.98 173.53 38.88 20.40 11 I1 Intron 0 63.74 44.23 52.01 26.22 51.63 40.96 25.23 37.94 26.97 47.01 27.05 10.30 33.79 50.44 29.83 11.24 18.30 61.45 27.70 38.40 13.76 10.54 18.13 12 I1_AR1 ActiveIntronRegion 0 24.68 35.10 44.01 23.16 41.14 39.99 22.36 40.94 23.43 58.19 25.14 4.40 15.90 52.13 25.46 10.81 16.13 66.93 27.65 37.64 12.39 9.94 15.50 13 I1_AR2 ActiveIntronRegion 0 66.14 84.22 77.50 46.68 82.06 63.11 33.21 84.98 47.04 107.71 36.73 21.29 21.89 88.79 31.19 9.91 30.53 99.47 51.50 75.89 17.81 25.70 38.42 14 I1_SR2 SilentIntronRegion 0 93.31 121.28 104.61 48.27 104.11 82.42 51.31 74.45 51.80 95.42 39.89 25.09 40.52 66.07 34.62 15.66 17.64 109.05 40.91 63.88 21.43 19.71 21.88 15 I1_AR3 ActiveIntronRegion 0 107.10 83.65 118.20 41.36 72.98 81.56 40.02 84.11 64.89 121.22 56.71 16.32 34.03 69.94 48.09 19.87 30.96 101.22 56.74 68.33 27.45 18.78 30.48 16 I1_AR4 ActiveIntronRegion 0 48.90 42.87 44.82 25.34 53.25 62.45 21.06 35.35 29.52 43.71 22.85 7.47 24.20 40.73 20.96 12.56 12.79 57.40 36.12 38.04 7.71 11.31 22.56 17 I1_AR5 ActiveIntronRegion 0 45.68 24.96 61.56 30.78 52.69 26.12 19.13 24.27 22.30 29.53 25.75 2.89 12.97 41.23 31.13 9.09 24.41 46.14 20.37 33.29 11.63 8.73 20.21 18 I1_SR5 SilentIntronRegion 0 101.82 38.73 42.67 24.82 51.65 33.66 26.76 33.15 23.61 31.74 27.04 14.25 62.42 57.47 36.47 11.68 22.24 54.38 26.14 36.66 15.41 10.35 19.02 19 ER2a ExonRegion 1 46.36 24.75 123.63 37.13 35.70 70.87 20.25 84.59 83.66 171.15 432.07 27.88 108.16 618.47 291.47 103.84 148.94 141.08 137.94 113.93 223.46 122.50 122.09 20 E2a_E3a KnownJunction 0 3.11 24.40 76.17 34.66 8.57 40.20 10.33 29.74 40.94 95.12 24.22 0.00 8.28 58.45 13.72 8.29 4.77 126.18 49.32 44.55 14.39 25.04 15.19 21 E2a_E5a KnownJunction 0 21.71 21.11 125.60 58.10 25.81 64.34 13.38 85.56 65.39 106.88 441.90 103.68 259.40 902.53 489.15 228.57 129.31 201.84 163.02 87.63 190.58 186.27 261.89 22 E2a_E6a NovelJunction 0 3.56 3.29 29.60 15.35 7.98 30.21 0.00 28.34 27.63 23.88 7.42 0.00 0.00 40.91 6.18 7.86 4.21 36.85 39.91 20.33 2.84 9.25 27.74 23 I2_AR1 ActiveIntronRegion 0 34.69 18.20 19.80 14.96 22.05 19.99 17.99 18.89 15.23 29.47 21.12 4.07 10.98 49.47 23.87 16.15 19.78 36.75 23.54 19.77 9.95 10.19 16.12 24 I2_SR2 SilentIntronRegion 0 25.76 9.28 19.94 11.79 17.10 22.62 12.92 22.54 21.07 30.80 28.75 12.52 39.97 63.76 26.81 12.83 15.45 49.12 22.83 27.54 19.29 12.77 15.27 25 ER3a ExonRegion 0 16.79 20.38 51.10 30.99 25.20 68.70 16.73 28.30 41.34 74.67 36.05 12.56 13.76 122.22 26.33 11.59 18.75 92.39 56.15 43.77 13.27 30.34 14.88 26 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E3a_E5a KnownJunction 0 0.00 6.05 19.22 9.02 3.74 36.06 9.76 9.28 12.36 12.63 26.43 0.00 6.82 81.11 25.59 11.36 4.30 25.54 0.00 15.28 5.44 11.33 0.00 28 E3a_E6a NovelJunction 0 0.00 21.71 84.03 25.47 8.66 202.78 7.82 42.14 54.34 89.24 7.53 0.00 6.82 22.90 0.00 11.19 0.00 67.90 30.31 26.01 11.24 11.33 3.50 29 ER4a ExonRegion 0 8.84 9.76 0.81 2.78 14.54 19.06 10.56 3.46 7.56 9.16 15.83 2.46 20.92 39.02 31.60 0.00 9.06 14.58 8.82 11.85 9.08 7.15 4.05 30 E4_Da NovelBoundary 0 33.49 24.80 17.95 17.18 62.22 74.39 58.07 35.45 44.73 37.42 68.81 14.25 33.93 85.41 43.88 12.73 30.01 65.79 60.52 29.85 21.19 13.72 7.68 31 E4a_E5a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 3.28 0.00 0.00 0.00 4.77 0.00 0.00 0.00 1.82 0.00 0.00 0.00 0.00 0.00 32 I4 Intron 0 52.56 16.54 22.79 22.99 32.59 49.48 17.44 32.15 32.24 43.99 40.93 15.04 76.63 87.99 37.84 13.69 21.59 65.30 31.53 34.52 20.96 16.59 20.10 33 I4_SR1 SilentIntronRegion 0 55.53 17.36 21.15 21.65 38.34 48.72 19.89 30.93 30.30 38.98 41.23 17.72 73.26 89.48 38.20 15.61 19.65 64.84 29.09 34.51 18.61 18.21 19.17 34 I4_AR1 ActiveIntronRegion 0 26.81 13.71 28.82 32.15 22.35 54.78 7.87 34.73 49.91 71.94 82.54 26.54 99.01 126.71 45.13 14.42 31.85 75.93 50.20 40.70 35.83 18.17 23.55 35 I4_AR2 ActiveIntronRegion 0 55.34 16.71 26.39 25.81 26.65 53.23 15.48 36.97 36.19 52.59 38.03 9.37 85.59 86.07 38.91 11.29 25.73 69.74 35.41 36.28 24.69 14.72 23.01 36 E5_Aa NovelBoundary 0 32.38 5.85 31.52 25.17 45.16 86.94 15.94 27.97 28.41 29.44 17.85 0.00 53.08 66.04 30.04 8.20 15.99 31.50 4.71 15.66 11.06 8.51 8.71 37 ER5a ExonRegion 0 30.07 28.09 164.56 65.88 70.69 153.58 41.46 107.09 80.35 145.20 420.48 67.18 262.90 1070.51 424.48 133.48 161.53 175.64 92.48 131.70 204.53 127.69 153.29 38 E5_Da NovelBoundary 0 14.89 15.26 23.65 19.74 51.87 45.14 16.47 17.54 26.62 32.23 21.90 0.00 14.45 34.38 28.93 7.69 4.77 45.72 13.65 17.32 6.30 5.94 7.77 39 E5a_E6a KnownJunction 0 58.97 33.42 220.31 65.96 116.13 285.80 64.30 122.15 98.96 174.50 597.57 56.87 257.29 1077.29 466.78 95.87 161.38 177.84 101.37 125.41 240.50 138.51 145.63 40 ER6a ExonRegion 0 86.18 108.29 294.83 122.41 96.13 420.12 88.84 207.33 196.52 288.95 708.94 89.07 281.89 1314.96 524.10 137.53 243.49 267.03 182.52 195.50 311.56 203.01 136.17 41 E6a_E7a KnownJunction 0 138.77 151.55 367.61 139.01 101.36 376.83 66.38 262.26 238.11 323.15 855.22 151.40 386.01 1615.11 669.88 108.43 284.62 364.17 212.81 226.20 329.09 188.29 171.15 42 I6 Intron 0 41.52 8.98 15.89 7.22 36.08 35.52 9.74 18.95 13.99 22.00 37.91 5.25 28.11 79.52 34.17 11.30 9.31 36.82 14.45 14.35 17.29 8.17 16.20 43 I6_SR1 SilentIntronRegion 0 41.72 9.01 15.97 7.26 36.25 35.69 9.79 19.04 14.06 22.11 38.09 5.27 28.24 79.88 34.32 11.35 9.34 37.00 14.52 14.41 17.37 8.21 16.28 44 E7_Aa NovelBoundary 0 69.79 18.35 17.47 5.56 48.98 43.16 12.90 21.24 19.13 50.26 34.69 6.30 75.32 99.48 51.80 3.93 24.87 32.08 40.10 15.60 18.16 11.94 28.60 45 ER7a ExonRegion 0 191.45 127.47 329.77 138.69 96.80 345.25 79.92 239.33 229.44 330.14 835.69 119.70 376.98 1609.58 633.74 163.57 294.22 421.88 204.80 235.94 337.17 201.17 179.31 46 E7a_E8a KnownJunction 0 324.58 136.42 344.93 161.65 229.37 450.37 142.91 261.97 273.12 346.25 855.32 188.16 478.86 1803.29 734.29 161.58 318.56 417.06 212.90 231.25 385.86 194.54 187.97 47 ER8a ExonRegion 0 179.24 109.26 358.89 155.58 170.19 366.87 108.12 259.75 263.82 335.86 849.34 141.85 470.24 1635.83 635.50 164.38 312.95 417.69 207.19 232.75 356.27 185.27 157.16 48 E8a_E9a KnownJunction 0 241.97 114.39 437.63 149.07 105.01 383.98 88.63 299.43 286.77 354.12 871.27 139.70 516.20 1750.91 718.59 167.73 276.58 446.83 183.25 239.50 361.09 216.03 178.32 49 ER9a ExonRegion 0 155.12 127.22 425.77 194.29 161.41 501.71 100.16 302.02 310.74 377.86 917.10 133.42 488.04 1804.63 726.74 174.88 303.21 491.53 214.88 264.08 424.43 227.09 175.83 50 E9a_E10a KnownJunction 0 239.89 169.25 495.78 192.92 201.44 482.45 130.94 313.97 322.68 429.33 953.03 203.02 490.23 1649.19 762.10 240.88 242.17 480.57 216.48 281.04 312.96 249.71 162.02 51 ER10a ExonRegion 0 218.65 174.33 448.53 166.11 229.06 458.49 137.82 286.92 275.38 373.54 771.11 157.87 557.35 1729.01 728.31 164.78 278.04 467.78 216.93 236.88 356.32 197.46 164.74 52 E10a_E11a KnownJunction 0 266.42 155.96 609.47 215.02 296.10 637.13 125.82 362.77 321.26 451.90 902.49 184.26 384.23 1817.48 836.77 184.31 386.25 436.17 280.38 288.33 411.25 210.83 195.57 53 ER11a ExonRegion 0 316.34 151.08 514.06 188.91 295.83 708.88 123.58 340.25 297.15 441.25 1006.33 160.08 476.78 1780.31 815.54 160.28 446.91 363.11 259.10 272.50 435.37 207.69 158.94 54 E11_Da KnownBoundary 0 423.48 219.30 563.91 194.55 392.28 865.01 178.46 343.63 307.72 480.18 1043.79 197.46 618.30 2020.32 1055.44 187.98 483.87 476.05 267.96 304.31 463.14 247.44 163.73 55 ER11b ExonRegion 0 435.68 201.62 540.05 226.44 227.81 475.97 142.02 388.84 319.24 461.29 887.59 140.90 556.41 1710.74 843.90 215.99 370.21 506.04 266.72 271.57 399.98 242.65 199.20 56 E11b_E12a KnownJunction 0 659.89 310.01 659.65 281.18 279.29 637.19 198.51 400.60 360.33 513.87 1079.22 152.75 638.27 1699.46 1072.50 232.33 457.41 579.15 299.11 296.38 441.21 260.49 176.10 57 E12_Aa NovelBoundary 0 111.87 2.83 6.15 1.33 32.09 31.06 6.76 9.04 14.21 8.33 12.53 0.00 0.00 19.48 13.35 3.25 16.64 1.53 3.67 15.02 0.00 3.06 8.71 58 ER12a ExonRegion 0 445.80 267.83 569.75 228.81 258.46 573.78 186.34 370.98 320.17 457.53 989.36 132.13 495.23 1726.14 973.21 217.74 385.72 515.45 258.13 254.14 410.05 223.01 164.02 59 ER12b ExonRegion 0 402.91 242.99 509.47 219.55 331.27 616.66 159.96 364.34 298.00 406.82 888.24 172.76 463.36 1743.17 797.75 234.29 380.81 454.29 272.28 261.01 342.45 243.28 202.51 60 E12b_E13a KnownJunction 0 384.81 226.34 484.64 296.53 519.02 912.49 187.43 406.72 307.55 387.48 786.30 232.58 777.38 1814.59 939.24 419.38 348.01 812.57 304.86 241.48 354.91 242.12 358.87 61 ER13a ExonRegion 0 168.00 56.95 135.32 63.52 74.61 156.80 42.95 89.16 77.52 99.23 162.11 30.93 98.53 374.50 193.50 64.19 76.38 133.59 100.16 55.13 71.77 78.16 67.60 62 E13_Ab KnownBoundary 1 1637.55 254.03 316.52 213.23 355.09 564.79 164.82 136.82 142.79 134.39 459.01 12.30 67.85 327.51 173.06 164.06 198.50 182.89 337.14 94.47 193.42 158.59 155.70 63 ER13b ExonRegion 1 953.49 161.61 181.20 128.75 191.90 356.22 97.44 66.76 80.75 71.43 300.08 17.32 180.86 701.32 472.90 111.73 144.83 60.11 233.13 63.23 144.00 108.67 100.58 64 ER13c ExonRegion 1 446.16 73.01 78.30 60.10 84.55 155.69 41.57 24.89 31.99 29.36 123.32 6.49 79.26 289.26 215.27 53.50 67.01 24.76 100.34 23.19 61.70 34.59 44.05