Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	USP22	Gene	0	28.85	228.17	189.59	144.46	160.92	190.68	107.66	254.76	334.80	406.13	284.70	151.49	144.27	255.20	138.56	204.23	266.20	702.71	407.15	501.94	328.46	212.24	174.89
2	455117	Transcript	0	0.00	0.00	0.20	0.00	0.00	0.10	0.00	0.19	0.41	3.82	0.75	0.00	0.00	1.62	0.00	0.00	0.55	0.10	1.24	4.49	1.35	0.00	2.12
3	261497	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	476111	Transcript	0	0.00	1.97	1.53	0.05	0.02	1.59	0.01	0.03	0.09	1.37	0.27	0.04	0.04	3.25	2.74	12.00	7.98	1.78	0.15	0.33	2.02	0.14	0.03
5	478443	Transcript	0	17.15	17.97	20.78	22.59	20.98	9.86	20.13	22.72	23.65	26.68	11.15	7.39	17.01	13.14	19.50	17.77	18.96	35.59	14.25	20.61	14.06	12.13	21.22
6	463692	Transcript	0	9.15	29.68	50.58	45.31	41.05	32.35	30.16	52.84	50.10	59.92	39.38	14.68	14.10	29.88	24.76	41.85	37.38	119.92	45.64	49.13	52.56	37.61	38.30
7	ER1a	ExonRegion	0	0.00	0.00	0.20	0.00	0.00	0.10	0.00	0.19	0.41	3.82	0.75	0.00	0.00	1.62	0.00	0.00	0.55	0.10	1.24	4.49	1.35	0.00	2.12
8	ER1b	ExonRegion	0	9.59	53.08	52.95	24.86	27.41	92.63	29.31	97.82	135.55	183.84	163.19	48.52	51.82	126.23	59.29	108.43	141.72	413.24	185.52	317.39	211.84	68.32	83.62
9	E1a_E3a	KnownJunction	0	26.60	311.72	240.97	137.88	182.51	225.84	97.03	393.74	567.24	685.28	468.54	173.61	175.64	435.99	210.64	225.50	449.65	1120.94	559.92	1014.56	616.60	287.49	225.53
10	E1a_E4a	NovelJunction	0	0.00	2.70	13.90	7.49	0.00	2.90	4.33	4.44	10.10	4.49	11.63	0.00	0.00	12.13	0.00	7.86	4.77	41.16	14.31	11.70	7.85	8.94	3.76
11	ER2a	ExonRegion	0	0.00	0.72	0.05	0.10	0.05	0.68	0.02	0.06	0.18	1.08	0.54	0.08	0.09	1.62	1.02	7.60	3.24	1.57	0.29	0.67	1.02	0.27	0.05
12	E2a_E3a	KnownJunction	0	0.00	3.22	3.02	0.00	0.00	2.50	0.00	0.00	0.00	1.67	0.00	0.00	0.00	4.89	4.45	16.41	12.72	1.99	0.00	0.00	3.03	0.00	0.00
13	ER3a	ExonRegion	0	57.38	466.21	321.02	206.70	293.67	419.66	254.63	500.15	764.92	927.62	667.43	409.87	397.07	581.69	297.74	307.09	641.29	972.28	636.45	1312.63	813.45	405.08	243.32
14	E3_Da	NovelBoundary	0	16.00	2.96	27.02	12.32	4.24	5.68	16.38	21.65	23.15	31.43	2.68	6.30	13.64	0.00	5.07	4.10	13.00	41.16	3.48	25.12	23.41	0.00	15.45
15	E3a_E4a	KnownJunction	0	91.65	759.14	446.11	350.27	506.62	473.19	386.60	738.47	1085.67	1181.20	912.13	697.28	688.59	693.39	234.50	519.09	810.85	1949.51	1139.89	1766.29	966.63	751.76	502.96
16	I3	Intron	0	12.63	18.76	25.19	21.92	31.37	5.68	31.53	30.49	19.97	29.60	2.55	5.69	8.20	1.48	9.01	9.21	10.11	18.34	12.78	24.37	8.54	2.95	13.71
17	I3_SR1	SilentIntronRegion	0	13.78	16.81	28.69	24.31	33.06	4.82	32.81	35.05	20.31	26.67	3.25	4.52	8.02	1.47	9.95	10.69	11.99	20.81	14.54	25.13	8.97	2.75	15.38
18	I3_AR1	ActiveIntronRegion	0	18.89	33.88	32.22	29.88	34.67	6.95	35.22	33.46	23.71	40.07	0.75	6.56	10.32	1.95	15.31	8.10	13.89	13.81	12.05	26.46	5.98	2.53	12.50
19	I3_SR2	SilentIntronRegion	0	9.63	17.24	19.36	17.12	29.34	6.64	29.92	24.78	19.13	31.29	2.30	7.18	8.08	1.40	6.13	7.99	6.83	17.26	11.20	23.65	9.11	3.45	12.46
20	ER4a	ExonRegion	0	61.94	531.85	612.21	451.90	489.19	485.30	291.79	928.79	1267.72	1397.12	1032.81	844.09	743.21	989.96	463.36	788.89	984.13	2440.15	1523.41	2132.56	1013.80	874.15	691.27
21	E4a_E5a	KnownJunction	0	101.94	607.00	1032.16	690.22	751.87	651.73	429.44	1319.91	1761.47	1998.69	1739.28	978.32	797.51	1201.90	652.95	978.12	1460.31	3303.54	2061.61	3024.18	1591.20	1300.17	942.32
22	I4	Intron	0	7.38	17.60	13.57	18.17	16.52	8.34	24.28	26.56	19.88	30.75	3.59	7.84	6.88	2.96	5.56	7.56	8.59	17.82	9.92	24.07	9.00	2.32	13.93
23	I4_SR1	SilentIntronRegion	0	11.42	8.22	11.93	19.74	8.53	10.14	12.51	19.09	14.09	17.39	2.66	6.42	1.86	0.75	3.89	6.11	14.22	18.80	17.85	25.27	10.15	0.41	20.27
24	I4_AR2	ActiveIntronRegion	0	9.31	19.54	10.19	15.85	27.23	10.48	33.85	29.95	20.06	35.93	3.08	10.63	13.23	3.48	7.74	4.90	10.39	7.03	5.31	20.80	3.87	2.17	13.04
25	I4_SR3	SilentIntronRegion	0	7.94	26.06	16.52	26.16	19.02	7.12	29.22	29.75	27.72	37.03	3.18	13.26	7.43	2.25	5.36	12.51	6.81	21.10	9.81	28.27	10.43	3.97	13.28
26	I4_AR3	ActiveIntronRegion	0	11.19	48.22	9.98	16.94	19.49	4.98	10.59	40.50	26.47	22.45	8.56	4.33	0.00	1.16	5.80	5.10	3.30	25.87	10.47	28.88	9.76	4.17	18.04
27	ER5a	ExonRegion	0	63.54	568.60	797.81	549.52	540.26	642.35	334.21	1086.06	1477.38	1656.92	1348.65	958.85	736.33	1046.65	428.56	909.50	1189.03	3201.97	1704.14	2266.39	1381.94	967.10	731.28
28	E5a_E6a	KnownJunction	0	84.68	700.73	925.40	555.57	728.52	929.41	519.84	1118.12	1434.22	1631.84	1202.94	953.71	901.89	942.20	388.28	746.64	1136.70	3519.18	1894.83	2051.10	1279.16	830.39	818.63
29	ER6a	ExonRegion	0	73.03	729.78	664.30	443.15	614.23	741.58	394.24	914.96	1264.50	1483.31	1145.44	879.72	688.39	963.73	475.67	887.86	1063.78	3401.04	1717.36	2056.65	1257.63	902.96	776.05
30	E6a_E7a	KnownJunction	0	113.72	821.17	648.41	479.46	610.70	785.12	478.90	920.59	1246.80	1502.58	1124.13	568.99	628.21	1123.20	428.58	910.02	1009.82	3451.95	1938.13	2058.64	1269.15	733.88	825.12
31	E6a_E8a	NovelJunction	0	0.00	3.29	5.00	0.00	20.63	5.28	0.00	1.77	0.00	4.38	5.00	13.50	0.00	9.65	0.00	0.00	0.00	0.00	0.00	3.26	0.00	2.63	4.35
32	ER7a	ExonRegion	0	58.05	459.67	541.00	328.51	330.51	537.19	262.84	678.22	1051.52	1276.50	913.93	484.72	480.41	760.82	391.71	630.29	838.67	2652.81	1324.92	1597.98	1013.45	630.31	610.56
33	E7a_E8a	KnownJunction	0	135.43	677.05	545.58	351.60	442.28	810.84	378.47	749.07	1184.16	1325.15	1116.18	606.05	639.73	843.96	394.34	776.12	865.54	2253.94	1624.61	2078.71	1165.74	662.85	691.19
34	I7	Intron	0	8.64	19.82	19.86	23.59	36.60	18.67	32.88	28.19	31.21	37.74	9.90	15.09	12.62	13.09	10.84	19.49	23.44	37.64	20.96	37.05	21.43	13.98	29.14
35	I7_AR1	ActiveIntronRegion	0	8.25	6.98	13.54	11.97	36.18	21.24	34.50	17.79	19.38	16.73	7.35	3.90	5.30	13.06	9.34	20.30	15.91	30.80	12.39	37.30	22.26	8.25	14.80
36	I7_SR1	SilentIntronRegion	0	6.18	11.01	24.30	20.58	32.78	23.77	33.13	35.80	38.52	41.94	9.82	11.54	13.69	15.03	10.61	36.57	27.54	51.86	31.21	48.48	31.03	19.24	47.81
37	I7_AR2	ActiveIntronRegion	0	6.86	10.35	12.59	14.77	25.86	15.19	31.25	16.74	24.83	31.20	7.01	15.24	10.69	10.70	9.11	16.20	19.12	40.37	22.80	34.10	21.72	10.03	37.37
38	I7_AR3	ActiveIntronRegion	0	10.50	17.15	16.56	14.36	30.07	11.39	24.11	17.38	18.02	33.77	6.18	0.00	1.85	11.63	16.91	25.11	12.16	45.51	16.97	31.24	35.00	7.90	24.88
39	I7_AR4	ActiveIntronRegion	0	13.04	39.03	29.05	17.50	34.61	23.31	22.93	24.09	23.47	44.21	6.05	4.19	8.93	14.25	8.70	17.55	25.13	41.13	14.18	38.78	25.80	17.74	15.91
40	I7_AR5	ActiveIntronRegion	0	16.63	52.00	28.18	20.05	17.97	21.22	28.18	25.93	27.17	39.32	2.49	8.66	18.76	21.11	14.92	23.35	17.92	50.15	18.20	29.18	33.06	27.09	23.49
41	I7_SR2	SilentIntronRegion	0	8.99	26.16	20.41	27.79	42.10	17.12	33.86	27.95	30.91	37.34	10.97	17.16	15.74	13.88	11.41	14.76	23.01	32.79	18.33	36.60	17.60	13.37	23.98
42	I7_AR6	ActiveIntronRegion	0	10.88	16.85	23.53	27.44	33.89	24.32	33.80	41.65	40.89	50.29	11.62	19.42	6.88	10.84	9.91	23.17	31.51	39.13	23.68	32.22	22.14	18.51	28.75
43	E8_Aa	NovelBoundary	0	14.22	22.63	31.93	45.52	56.11	32.20	52.20	50.69	40.71	58.64	24.80	37.66	45.78	11.48	18.54	60.58	38.71	70.47	58.83	41.74	37.44	20.39	51.82
44	ER8a	ExonRegion	0	73.58	480.92	567.36	339.71	402.57	578.56	305.14	709.76	1031.33	1252.08	880.64	486.17	427.41	861.87	489.55	626.39	871.03	2266.35	1403.51	1579.82	1086.47	688.68	570.01
45	E8_Da	NovelBoundary	0	20.82	9.08	13.72	16.78	23.09	8.35	28.48	26.94	30.70	37.15	22.11	31.36	6.33	2.59	24.11	30.16	16.83	43.57	43.30	46.66	24.65	16.10	51.64
46	E8a_E9b	KnownJunction	0	114.76	564.64	609.80	333.02	413.50	475.29	266.52	740.40	1086.74	1311.29	960.77	280.59	470.91	563.07	469.38	570.19	882.65	2758.35	1332.56	1615.44	1064.36	537.94	536.59
47	I8	Intron	0	16.30	35.33	19.38	26.71	42.97	20.50	36.56	31.69	35.78	35.64	22.33	10.17	13.81	16.59	14.81	27.08	20.46	47.71	28.13	45.56	27.50	18.98	25.10
48	I8_AR1	ActiveIntronRegion	0	11.25	19.05	13.21	17.56	40.29	17.80	43.34	18.89	30.10	26.56	17.13	2.59	6.17	16.60	10.62	27.18	24.10	52.19	30.78	38.34	24.13	8.60	20.37
49	I8_SR1	SilentIntronRegion	0	17.98	30.35	20.82	22.16	27.96	13.44	20.86	33.46	35.40	36.50	26.39	10.92	10.71	14.30	14.03	27.95	16.14	39.72	28.61	44.08	23.37	18.75	23.65
50	I8_AR2	ActiveIntronRegion	0	18.12	45.00	21.83	32.81	49.96	24.46	39.30	37.20	38.73	39.73	23.36	13.50	18.60	17.48	17.13	26.80	20.41	48.72	26.80	49.68	30.72	24.04	27.96
51	E9_Aa	NovelBoundary	0	14.60	28.81	32.91	37.99	24.28	37.76	46.90	64.53	38.89	62.99	32.01	0.00	20.45	16.95	13.35	56.22	30.29	55.34	30.97	44.17	28.17	23.33	42.00
52	ER9a	ExonRegion	0	0.96	4.04	2.05	1.62	1.16	3.19	1.61	3.18	3.75	4.85	3.11	0.98	2.50	2.66	1.84	2.54	2.70	10.41	3.99	5.17	4.52	1.67	2.50
53	E9_Ab	KnownBoundary	0	21.49	20.98	8.07	20.14	23.34	36.57	49.15	17.91	10.53	24.93	7.16	0.00	19.32	19.60	5.44	34.01	8.51	79.05	38.59	25.95	11.43	2.63	15.71
54	ER9b	ExonRegion	0	39.54	392.73	460.71	316.07	226.00	457.37	237.08	629.53	877.03	1047.25	690.67	313.17	376.48	639.65	400.12	464.23	699.96	1821.59	1076.41	1328.73	901.46	531.06	431.35
55	E9a_E10a	KnownJunction	0	48.90	395.85	533.93	468.77	385.23	634.35	318.59	757.28	945.19	1108.32	664.43	316.60	444.61	575.85	456.89	483.63	737.54	2116.49	1014.05	1407.97	886.57	496.79	432.79
56	I9	Intron	0	18.38	30.94	24.57	25.44	41.39	15.77	36.27	32.04	29.33	31.59	6.85	13.35	8.73	6.53	12.44	14.41	15.86	36.29	18.80	38.20	15.41	13.00	19.56
57	I9_SR1	SilentIntronRegion	0	18.41	30.99	24.61	25.48	41.45	15.80	36.33	32.09	29.37	31.64	6.86	13.38	8.75	6.54	12.45	14.43	15.88	36.35	18.83	38.27	15.44	13.02	19.59
58	E10_Aa	NovelBoundary	0	27.04	58.48	50.53	61.53	59.51	38.05	51.76	48.18	42.48	41.85	5.11	30.61	58.44	4.94	9.77	10.34	12.34	49.41	38.50	61.36	20.63	11.82	39.61
59	ER10a	ExonRegion	0	77.06	490.11	575.13	497.34	542.80	583.18	356.21	882.90	1077.09	1275.26	889.16	346.49	499.14	780.97	440.26	571.19	795.23	2091.87	1355.54	1531.73	1062.29	639.59	519.46
60	E10_Da	NovelBoundary	0	6.52	26.31	14.49	12.52	37.44	5.00	51.67	10.02	15.39	18.72	0.00	0.00	0.00	7.18	4.82	4.27	13.84	10.40	4.80	18.86	2.29	0.00	3.59
61	E10a_E11a	KnownJunction	0	115.28	763.09	699.59	607.68	708.66	832.42	562.85	1159.48	1306.09	1518.16	1088.70	399.88	469.13	912.83	534.89	756.98	937.07	2861.90	1865.47	2036.15	1377.45	868.23	651.32
62	I10	Intron	0	10.69	15.98	16.52	9.97	33.04	5.53	28.70	15.72	16.66	20.50	2.98	2.52	7.04	2.52	5.76	7.30	9.96	10.83	7.82	12.24	3.71	2.05	10.92
63	I10_SR1	SilentIntronRegion	0	11.85	18.58	21.53	13.17	39.44	9.73	32.39	17.46	16.82	21.92	4.56	2.67	6.79	3.30	4.30	10.08	13.14	13.43	9.38	14.74	6.18	3.07	17.31
64	I10_SR2	SilentIntronRegion	0	9.68	13.68	12.04	7.10	27.36	1.73	25.48	14.21	16.59	19.32	1.56	2.40	7.31	1.83	7.12	4.80	7.11	8.53	6.43	10.02	1.48	1.12	5.14
65	E11_Aa	NovelBoundary	0	23.71	9.01	13.99	6.89	20.20	0.00	27.65	10.56	14.70	14.53	2.16	5.40	6.82	4.59	8.90	4.36	3.55	13.68	13.08	8.44	5.62	10.10	15.45
66	ER11a	ExonRegion	0	52.18	528.42	630.44	512.90	515.02	625.35	369.66	912.55	1113.01	1376.41	966.18	399.11	475.22	834.41	469.25	686.98	805.74	2597.51	1354.47	1583.97	1110.48	708.58	522.95
67	E11_Da	KnownBoundary	0	23.19	8.88	55.38	21.91	0.00	10.62	20.27	9.82	17.27	27.37	24.90	12.60	28.24	34.38	15.70	7.52	26.83	33.74	17.04	17.83	14.46	33.80	21.34
68	E11a_E12b	KnownJunction	0	84.90	563.72	608.52	557.07	789.73	769.90	361.07	884.78	1108.09	1350.65	1078.06	396.28	660.18	802.52	388.03	671.88	652.64	2385.43	1432.98	1731.26	1092.04	682.75	608.30
69	ER11b	ExonRegion	0	33.34	31.90	39.51	43.56	40.81	16.53	38.65	42.25	43.54	48.52	19.19	13.80	31.51	23.62	37.17	32.99	35.22	60.77	24.51	36.05	23.59	22.59	39.93
70	E11_Db	NovelBoundary	0	140.17	90.77	25.90	12.82	89.90	23.57	82.45	31.34	33.07	42.98	25.48	25.21	19.80	40.73	50.31	26.32	25.15	17.49	28.99	36.69	13.47	59.03	57.11
71	I11	Intron	0	27.66	43.26	67.95	57.01	70.25	28.51	50.93	49.89	55.38	61.84	34.98	27.47	29.23	30.58	25.56	45.32	31.92	92.81	53.95	51.44	44.10	41.62	55.84
72	I11_SR1	SilentIntronRegion	0	27.72	43.35	68.08	57.12	70.39	28.57	51.03	50.00	55.50	61.97	35.05	27.52	29.29	30.64	25.60	45.41	31.98	93.01	54.06	51.55	44.19	41.70	55.95
73	E12_Aa	NovelBoundary	0	7.04	21.97	87.70	59.53	43.55	25.55	38.29	50.93	41.55	56.95	39.59	10.95	33.44	23.60	17.80	49.56	27.02	90.78	44.61	44.55	61.47	34.66	28.68
74	ER12a	ExonRegion	0	9.15	29.68	50.58	45.31	41.05	32.35	30.16	52.84	50.10	59.92	39.38	14.68	14.10	29.88	24.76	41.85	37.38	119.92	45.64	49.13	52.56	37.61	38.30
75	E12_Ab	KnownBoundary	0	14.00	17.89	88.64	50.31	32.00	20.16	40.98	64.98	51.42	79.75	52.12	6.30	13.64	29.25	27.57	38.02	55.45	96.88	36.99	63.09	58.87	37.23	28.68
76	ER12b	ExonRegion	0	57.38	378.15	590.39	545.48	500.71	540.53	239.30	918.53	1113.46	1356.09	1125.63	425.82	544.27	848.97	499.06	626.88	825.28	2511.87	1384.45	1676.73	1220.18	767.47	579.09
77	E12a_E13a	KnownJunction	0	45.42	385.39	657.90	628.59	425.47	462.23	203.55	962.16	1186.56	1462.18	1032.21	621.50	624.63	958.39	442.18	725.45	978.40	2772.82	1509.97	1754.78	1317.22	751.34	585.68
78	ER13a	ExonRegion	0	44.98	345.54	630.32	546.12	381.05	449.92	222.57	806.99	1024.62	1316.80	988.44	483.92	510.64	784.44	415.30	717.00	915.27	2391.21	1636.79	1442.32	1110.39	728.63	550.89
79	E13_Da	NovelBoundary	0	26.30	237.39	394.28	284.08	303.31	383.02	168.52	555.73	653.81	878.20	615.63	252.23	182.29	347.76	227.33	307.36	538.01	942.36	477.85	743.74	773.64	255.59	235.52
80	E13b_E14a	KnownJunction	0	27.56	310.47	382.96	353.63	457.64	558.94	277.39	497.94	714.06	942.75	627.74	311.35	228.07	519.22	322.02	385.20	628.52	1146.56	751.74	983.30	862.23	417.49	315.42
81	ER13b	ExonRegion	0	23.16	277.24	413.56	341.18	370.44	495.13	222.94	555.31	731.33	1005.96	731.28	317.98	242.58	504.65	280.29	385.72	697.41	1240.66	673.00	930.49	923.97	362.19	311.94
82	ER14a	ExonRegion	0	22.47	199.06	98.48	82.22	106.20	107.74	64.85	120.48	145.96	184.12	109.62	45.11	38.37	114.56	66.12	89.00	107.88	254.38	162.08	194.73	131.49	89.22	73.49
83	IG10	Intergenic	0	38.44	176.78	32.80	4.14	162.88	1.09	25.79	6.44	2.54	115.51	2.16	16.91	2.09	0.47	0.38	1.96	1.30	2.54	11.95	51.94	0.29	0.00	5.22
84	IG10_AR1	ActiveIntergenicRegion	0	41.92	193.23	37.12	4.82	175.46	1.29	27.35	7.17	2.86	129.32	2.31	18.20	2.25	0.54	0.45	2.26	1.54	3.01	13.92	57.81	0.34	0.00	5.71