Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PMP22 Gene 0 216.21 43.35 278.79 254.21 290.83 1100.07 57.57 274.06 512.32 340.57 0.00 0.30 0.00 0.00 0.00 0.00 0.00 70.48 7.40 23.58 308.72 332.04 146.22 2 428538 Transcript 0 0.00 0.00 0.00 0.00 0.00 5.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 312280 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 494511 Transcript 0 0.00 0.00 0.00 0.00 0.00 2.50 0.00 4.44 4.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.81 0.00 0.00 9.39 0.00 0.00 5 471150 Transcript 0 2.06 0.33 4.01 2.80 2.45 5.06 1.40 9.32 10.89 4.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.22 0.00 0.17 10.31 0.84 2.49 6 395938 Transcript 0 15.16 1.62 4.10 3.45 14.74 117.40 4.16 0.74 10.28 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.66 0.00 1.09 25.95 18.96 13.48 7 395936 Transcript 0 0.76 0.04 0.74 0.00 1.29 10.31 0.52 0.00 2.60 0.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.21 0.00 0.00 6.56 1.23 0.00 8 426385 Transcript 0 12.57 1.14 7.89 5.79 5.18 20.40 1.74 9.94 17.68 14.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.35 0.00 0.53 27.96 8.33 6.24 9 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 5.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1b ExonRegion 0 0.00 0.00 0.00 0.00 3.06 53.44 0.00 3.46 1.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.26 0.00 0.00 4.72 0.30 0.00 11 ER1c ExonRegion 0 7.50 1.85 0.56 4.83 16.30 696.01 0.00 8.33 18.98 8.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.36 0.00 0.00 22.64 10.61 4.27 12 ER1d ExonRegion 0 12.14 1.21 2.52 28.54 22.62 1341.88 0.00 50.50 88.15 44.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.67 0.00 1.41 54.23 34.89 13.69 13 E1a_E3b KnownJunction 0 0.00 0.00 1.42 42.45 4.33 144.97 0.00 123.26 166.46 91.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.86 0.00 0.00 115.03 11.45 15.71 14 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.50 0.00 4.44 4.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.81 0.00 0.00 9.39 0.00 0.00 15 ER2a ExonRegion 0 15.16 1.62 4.10 3.45 14.74 117.40 4.16 0.74 10.28 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.66 0.00 1.09 25.95 18.96 13.48 16 E2_Ab KnownBoundary 0 27.04 5.66 17.77 11.29 47.45 346.96 19.30 1.97 27.89 2.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.28 0.00 3.07 63.14 43.90 35.43 17 ER2b ExonRegion 0 82.37 10.00 53.43 33.09 95.68 302.84 33.70 21.36 77.04 84.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63.22 0.00 13.16 116.46 82.43 84.98 18 E2a_E3b KnownJunction 0 43.42 3.03 98.37 51.11 44.31 86.94 8.21 15.85 89.58 112.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55.88 0.00 12.27 135.91 89.83 44.47 19 E3_Aa NovelBoundary 0 29.26 5.92 6.77 6.03 0.00 36.74 2.25 6.61 3.59 9.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.96 17.60 6.52 23.23 67.11 105.34 20 E3_Ab NovelBoundary 0 43.19 10.06 33.26 13.82 17.15 68.77 17.62 8.21 39.38 14.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.67 4.80 0.00 66.16 38.94 112.42 21 ER3a ExonRegion 0 12.57 1.14 7.89 5.79 5.18 20.40 1.74 9.94 17.68 14.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.35 0.00 0.53 27.96 8.33 6.24 22 ER3b ExonRegion 0 30.60 5.84 159.55 134.94 30.81 232.02 6.92 186.41 374.34 292.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 98.91 0.00 26.49 443.40 223.84 133.79 23 E3_Da KnownBoundary 0 0.00 0.00 2.96 0.00 8.23 0.00 0.00 7.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.49 0.00 0.00 10.93 0.00 7.77 24 E3a_E4a KnownJunction 0 27.56 0.00 281.98 216.59 71.14 679.15 10.42 215.84 499.07 399.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 130.16 0.00 54.52 523.69 289.08 195.31 25 ER3c ExonRegion 0 2.06 0.33 4.01 2.80 2.45 5.06 1.40 9.32 10.89 4.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.22 0.00 0.17 10.31 0.84 2.49 26 ER4a ExonRegion 0 57.29 10.98 317.87 254.82 138.76 2720.28 18.48 261.17 663.38 479.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 193.46 12.93 45.34 768.72 329.43 256.16 27 E4a_E5a KnownJunction 0 98.46 31.51 369.50 274.79 252.97 2086.87 50.83 339.44 682.34 411.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 181.90 12.89 52.60 798.23 284.00 285.97 28 ER5a ExonRegion 0 117.67 30.69 359.16 272.30 258.85 1401.84 71.60 314.77 734.45 488.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 152.31 5.56 49.12 808.89 341.92 226.29 29 E5a_E6a KnownJunction 0 0.00 2.83 0.00 1.63 3.31 2.90 0.00 0.00 3.12 1.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 8.59 9.19 0.00 30 E5a_E7a KnownJunction 0 421.04 76.30 407.94 337.52 315.62 1204.19 67.75 340.59 695.19 462.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 194.50 8.56 61.49 789.39 323.13 224.59 31 ER6a ExonRegion 0 1.73 2.03 1.23 0.65 2.25 13.37 1.05 0.00 3.58 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.15 0.00 1.68 15.60 10.14 0.00 32 E6b_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 7.72 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 2.41 0.00 0.00 33 ER6b ExonRegion 0 1.51 0.07 1.49 0.00 2.58 12.90 1.04 0.00 3.40 0.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.00 10.70 2.46 0.00 34 ER7a ExonRegion 0 278.32 68.76 389.00 306.44 354.16 1550.31 85.48 354.64 720.55 480.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 163.96 14.74 41.83 679.39 405.74 250.14 35 E7_Da KnownBoundary 0 254.71 118.53 461.16 425.25 658.83 2441.49 200.63 488.00 981.10 614.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 108.36 13.27 38.35 526.10 465.80 237.22 36 ER7b ExonRegion 0 471.49 94.96 507.67 524.60 586.26 2063.27 125.17 513.92 987.34 666.97 0.00 0.75 0.00 0.00 0.00 0.00 0.00 89.42 22.94 44.10 338.17 821.28 277.51 37 E7_Db KnownBoundary 0 1124.79 205.88 676.47 714.66 954.67 3542.68 231.55 641.08 1166.63 800.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 121.54 35.11 62.45 608.82 1037.85 480.17 38 ER7c ExonRegion 0 452.71 85.71 530.47 493.37 610.71 1626.40 106.49 526.58 896.67 580.19 0.00 0.81 0.00 0.00 0.00 0.00 0.00 77.68 9.89 31.39 373.60 581.58 216.78 39 ER7d ExonRegion 0 8.47 4.07 1.84 5.45 5.35 7.34 0.66 0.00 4.32 1.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.20 0.00 0.00