Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	PIGS	Gene	0	53.42	52.86	147.83	55.73	78.43	140.75	53.90	107.31	92.57	117.12	224.19	54.30	79.34	139.38	141.09	173.93	149.10	129.54	98.42	120.35	77.83	43.70	41.43
2	308360	Transcript	1	19.98	15.21	5.16	1.61	8.72	50.74	14.34	5.77	4.45	6.80	46.45	0.00	3.73	15.85	32.18	30.51	30.00	11.31	15.49	5.63	14.46	8.15	8.14
3	395346	Transcript	1	2.10	6.80	14.35	4.32	6.18	20.08	3.83	12.11	8.15	28.76	24.35	6.41	1.43	16.44	16.29	25.20	25.22	29.90	18.17	22.55	8.61	4.24	4.55
4	465444	Transcript	0	0.00	0.00	1.05	0.00	1.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.74	1.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	484580	Transcript	0	17.17	7.93	16.08	5.98	18.19	20.98	9.85	17.12	17.06	13.72	17.02	5.51	21.25	20.87	22.33	23.95	18.26	12.70	11.96	14.41	9.71	3.09	7.81
6	268758	Transcript	0	11.35	20.14	109.65	42.45	23.41	41.40	16.16	78.40	76.53	81.98	61.41	1.76	3.98	4.91	10.54	46.93	43.06	85.02	43.51	38.81	29.62	21.13	11.10
7	492429	Transcript	0	11.74	26.17	31.48	13.43	25.33	45.09	14.78	23.65	15.50	24.62	17.45	11.84	3.12	8.94	9.59	19.27	9.89	15.98	10.71	17.09	4.37	3.53	5.93
8	487231	Transcript	0	24.04	21.28	20.67	17.17	27.38	26.23	14.19	23.22	15.24	17.03	17.52	11.39	9.74	16.03	16.80	20.33	18.74	18.08	13.76	14.67	3.62	4.61	9.76
9	422144	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	ER1a	ExonRegion	1	8.54	11.22	0.00	0.00	2.68	34.53	11.50	0.00	1.02	0.28	34.19	0.00	1.78	5.10	45.32	14.45	23.90	2.36	8.68	1.54	11.93	1.72	8.00
11	ER1b	ExonRegion	1	20.84	23.79	4.38	0.00	12.65	73.69	25.08	4.45	3.59	10.01	78.96	0.00	3.55	25.49	66.73	42.51	57.02	9.01	30.98	7.54	28.38	9.66	15.22
12	E1_Da	KnownBoundary	0	0.00	0.00	5.41	2.03	8.06	16.47	6.27	3.98	2.66	16.55	18.32	0.00	0.00	0.00	0.00	7.86	16.55	6.05	13.84	2.94	9.39	6.18	4.18
13	E1a_E1c	KnownJunction	0	31.41	19.21	10.32	3.23	14.77	66.95	17.18	11.54	7.87	13.32	58.70	0.00	5.68	26.61	19.04	46.57	36.09	20.27	22.31	9.72	16.99	14.57	8.28
14	ER1c	ExonRegion	0	2.10	6.80	14.35	4.32	6.18	20.08	3.83	12.11	8.15	28.76	24.35	6.41	1.43	16.44	16.29	25.20	25.22	29.90	18.17	22.55	8.61	4.24	4.55
15	E1_Ac	KnownBoundary	0	7.26	23.75	48.64	5.39	39.05	79.95	17.31	28.34	23.18	45.91	51.49	0.00	0.00	35.08	34.24	43.15	39.18	57.87	29.27	76.38	4.76	11.21	3.76
16	ER1d	ExonRegion	1	10.03	19.33	62.39	17.96	29.47	56.64	17.52	45.97	40.63	71.12	168.51	8.47	11.84	94.79	59.61	74.90	128.81	85.37	62.40	90.95	64.11	15.03	21.85
17	E1b_E2a	KnownJunction	1	0.00	15.33	121.88	30.80	38.46	90.74	13.38	72.00	75.38	120.34	312.08	6.15	39.77	145.57	153.90	111.77	224.87	145.17	72.76	103.23	90.32	22.53	36.36
18	ER2a	ExonRegion	0	20.45	28.89	123.49	40.94	45.63	121.49	37.05	106.96	101.38	140.38	311.99	31.93	51.34	202.52	176.12	250.19	205.16	233.86	145.93	172.45	117.45	46.86	59.07
19	E2a_E3a	KnownJunction	0	35.04	92.75	175.07	64.09	170.88	309.82	80.38	156.12	148.09	211.83	484.54	85.23	80.35	263.17	193.96	297.19	338.29	217.96	238.50	269.73	159.76	60.01	88.09
20	ER3a	ExonRegion	0	46.66	77.84	175.90	54.71	87.56	249.05	91.06	126.16	134.41	200.49	446.07	68.17	81.29	257.46	164.05	236.61	339.15	202.80	134.63	214.92	204.04	61.70	53.28
21	E3a_E5a	KnownJunction	1	29.63	57.49	147.78	60.80	70.12	144.80	76.27	118.42	130.35	187.28	394.63	34.66	89.44	169.99	123.12	179.61	252.55	187.20	146.73	185.42	171.43	66.38	54.55
22	ER4a	ExonRegion	0	0.00	0.00	0.56	0.00	0.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.48	2.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E4a_E5a	KnownJunction	0	0.00	0.00	1.54	0.00	3.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER5a	ExonRegion	0	36.10	66.78	165.76	68.71	80.45	140.80	45.19	155.37	150.29	199.57	518.65	103.53	141.47	263.88	213.21	298.99	318.72	247.20	205.25	242.76	209.62	91.11	49.64
25	E5a_E6a	KnownJunction	0	39.56	85.77	209.72	61.60	75.47	184.72	51.49	144.58	150.72	186.96	489.81	167.15	229.53	267.35	195.81	413.82	375.13	287.44	235.30	263.53	252.18	79.85	79.81
26	E5a_E7b	NovelJunction	0	0.00	9.27	15.46	10.52	7.30	45.26	7.51	16.92	15.22	22.59	21.64	6.30	0.00	41.56	25.71	25.81	7.95	13.47	0.00	12.78	9.02	5.39	3.93
27	I5	Intron	0	24.62	13.95	8.71	13.03	31.92	33.91	25.67	22.66	19.76	15.55	22.48	24.53	57.68	25.83	18.76	30.14	19.20	14.66	14.25	20.30	3.29	7.15	7.88
28	I5_SR1	SilentIntronRegion	0	31.99	17.69	8.65	14.70	43.44	41.33	33.39	25.73	26.21	16.11	22.13	28.71	72.97	28.69	25.23	32.59	21.85	11.56	16.13	25.94	2.33	10.25	10.53
29	I5_AR1	ActiveIntronRegion	0	17.07	10.13	8.83	11.37	20.11	26.38	17.77	19.60	13.16	15.05	22.97	20.33	42.10	23.00	12.13	27.76	16.54	17.97	12.38	14.55	4.30	3.95	5.17
30	E6_Aa	NovelBoundary	1	38.97	18.94	17.65	13.72	15.96	2.90	10.33	12.45	8.91	18.45	11.74	18.91	38.96	17.25	14.59	19.82	8.70	31.63	8.09	29.91	11.37	4.65	8.45
31	ER6a	ExonRegion	0	34.57	68.85	194.69	68.52	104.59	241.64	88.09	154.59	157.77	188.93	459.59	111.44	119.48	256.51	175.69	348.24	307.33	299.71	198.63	218.97	182.95	99.70	78.27
32	E6a_E7b	KnownJunction	0	38.97	138.92	256.91	110.01	128.52	321.75	111.03	185.00	202.83	215.65	475.44	148.10	155.67	315.38	229.68	701.35	352.13	464.73	376.01	240.58	137.58	153.08	132.65
33	ER7a	ExonRegion	0	17.17	7.93	16.08	5.98	18.19	20.98	9.85	17.12	17.06	13.72	17.02	5.51	21.25	20.87	22.33	23.95	18.26	12.70	11.96	14.41	9.71	3.09	7.81
34	E7_Ab	KnownBoundary	0	36.01	17.89	23.92	12.92	79.03	51.28	22.30	28.26	24.59	15.18	15.11	12.60	19.80	16.89	50.07	46.48	19.73	18.61	21.55	23.01	19.21	5.51	16.22
35	ER7b	ExonRegion	0	56.36	98.85	282.58	91.50	109.44	250.10	103.66	182.38	201.78	279.69	554.11	104.69	142.02	316.47	229.66	508.77	362.13	339.99	225.05	242.07	195.34	126.74	109.12
36	ER7c	ExonRegion	0	52.91	76.29	215.67	76.98	82.49	240.35	73.55	176.42	174.32	279.69	479.36	110.18	178.71	316.09	233.60	471.13	387.00	198.35	186.29	217.17	172.12	86.14	109.97
37	E7b_E8a	KnownJunction	0	73.20	103.99	212.91	65.56	117.91	266.78	98.35	235.15	158.53	244.18	478.75	115.69	280.18	373.77	259.60	433.22	371.86	207.14	185.98	223.39	146.72	84.38	119.42
38	ER7d	ExonRegion	0	50.09	80.67	205.25	72.46	87.85	253.68	78.56	201.36	174.97	261.49	444.24	93.08	203.23	323.20	202.12	428.98	363.65	189.09	175.73	215.25	152.42	85.77	120.89
39	ER7e	ExonRegion	0	50.09	87.44	204.16	72.38	100.49	244.81	79.29	217.40	177.93	259.65	455.52	99.82	237.89	340.52	223.07	424.52	348.06	215.98	168.47	222.58	147.65	87.51	119.26
40	E8_Aa	NovelBoundary	0	7.04	22.36	15.20	7.99	16.47	32.77	12.76	14.29	8.22	13.46	11.37	12.60	21.10	0.00	0.00	0.00	0.00	6.63	0.00	6.33	0.00	0.00	0.00
41	ER8a	ExonRegion	0	65.49	109.99	286.25	92.75	141.97	270.56	90.07	270.33	226.80	303.67	521.83	108.61	201.54	343.80	219.17	454.23	343.58	333.60	245.82	238.84	167.99	116.92	93.64
42	E8_Da	KnownBoundary	1	36.60	48.22	99.29	28.53	73.77	147.93	36.21	105.97	89.38	112.50	201.74	6.30	19.48	38.85	41.16	153.98	131.65	131.37	153.04	117.80	62.83	51.37	40.63
43	E8a_E8b	KnownJunction	1	45.42	80.58	252.21	99.09	93.63	165.59	64.65	204.47	191.38	228.81	245.64	7.05	15.91	19.66	42.15	187.73	172.23	235.04	174.03	155.25	118.49	84.50	44.39
44	E8_Ab	KnownBoundary	1	52.08	67.69	158.36	67.39	82.09	97.50	80.95	123.72	116.23	148.52	269.28	30.01	32.63	92.24	59.09	224.90	207.76	198.23	127.72	111.98	79.26	89.34	34.66
45	ER8b	ExonRegion	0	107.94	143.03	313.69	106.76	205.14	366.76	136.37	261.00	243.73	321.52	695.84	108.24	170.40	349.73	213.73	648.91	469.83	391.72	352.51	310.64	224.04	192.38	124.32
46	ER8c	ExonRegion	0	96.94	110.25	293.42	106.25	182.84	325.77	128.42	202.26	230.87	305.86	698.27	150.00	201.30	352.53	256.68	616.16	470.93	335.71	255.45	291.20	242.28	142.13	109.52
47	E8_Db	NovelBoundary	0	62.90	84.06	199.08	66.43	116.72	200.40	72.69	107.33	166.29	217.98	507.13	179.76	209.24	285.95	214.60	370.67	315.38	193.13	88.28	204.28	179.65	40.84	50.28
48	E8c_E9b	KnownJunction	0	96.02	89.46	252.95	71.99	126.40	228.73	79.40	134.56	212.85	236.68	435.58	103.98	182.94	255.93	177.64	312.05	297.24	263.52	142.50	178.71	155.86	64.42	83.66
49	ER8d	ExonRegion	0	66.83	78.92	224.71	67.72	114.13	187.68	65.28	126.64	197.86	241.25	488.28	129.38	164.87	268.60	194.38	342.37	325.77	239.43	114.80	189.69	186.21	55.77	62.46
50	I8	Intron	0	7.12	9.83	10.40	6.66	17.32	28.17	10.05	16.00	8.10	9.29	6.34	4.00	10.28	7.35	9.87	6.92	6.84	9.60	4.40	12.30	2.66	0.54	1.77
51	I8_SR1	SilentIntronRegion	0	7.14	9.85	10.42	6.67	17.35	28.22	10.07	16.03	8.11	9.31	6.35	4.01	10.30	7.37	9.88	6.94	6.85	9.61	4.41	12.32	2.67	0.54	1.78
52	E9_Aa	NovelBoundary	0	30.75	32.56	41.48	15.35	66.89	78.36	17.40	20.54	15.05	23.42	7.53	6.75	13.64	7.95	15.45	4.10	21.22	19.44	28.24	12.66	0.00	13.90	4.35
53	ER9a	ExonRegion	0	11.74	26.17	31.48	13.43	25.33	45.09	14.78	23.65	15.50	24.62	17.45	11.84	3.12	8.94	9.59	19.27	9.89	15.98	10.71	17.09	4.37	3.53	5.93
54	E9_Ab	KnownBoundary	0	18.45	26.44	27.38	14.08	27.33	58.38	6.36	23.08	19.97	33.77	19.37	6.30	0.00	22.07	17.80	7.69	4.30	11.32	0.00	25.95	2.66	2.33	3.24
55	ER9b	ExonRegion	0	79.34	108.80	286.17	85.82	114.24	282.99	92.76	191.29	222.15	253.54	484.54	145.84	200.90	300.69	224.83	397.36	313.12	292.52	198.25	238.22	183.27	98.33	103.75
56	E9_Da	KnownBoundary	0	39.86	55.91	167.14	47.45	44.14	127.99	45.40	111.72	138.08	143.60	232.59	119.89	127.26	122.02	94.44	209.86	141.47	134.18	117.56	98.88	91.86	36.43	43.45
57	E9a_E9d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
58	E9_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	E9_Db	KnownBoundary	0	0.00	8.88	6.56	4.40	10.95	2.78	4.15	6.57	7.18	7.90	14.69	0.00	6.66	2.41	0.00	8.46	3.74	8.29	0.00	15.34	0.00	0.00	0.00
60	E9b_E9f	KnownJunction	0	97.35	133.86	279.71	77.31	135.23	292.05	105.55	172.22	194.10	243.50	467.28	86.43	243.49	363.83	291.00	469.02	278.26	265.05	155.20	234.77	166.43	77.58	103.20
61	ER9c	ExonRegion	0	63.73	119.98	259.37	71.78	125.17	264.68	90.03	172.65	205.85	244.67	486.88	110.16	246.49	360.92	249.83	447.14	291.95	259.92	161.04	231.44	161.36	72.00	92.34
62	ER9d	ExonRegion	0	64.55	132.18	257.94	69.51	136.46	285.16	95.33	173.71	206.88	246.58	503.52	108.24	239.19	372.74	237.90	457.71	297.08	267.92	175.19	241.49	161.97	75.01	93.97
63	ER9e	ExonRegion	0	19.32	17.54	7.48	9.63	26.30	34.74	8.67	19.62	15.45	20.29	13.32	0.74	4.31	24.51	14.46	20.04	18.10	13.47	10.57	14.29	1.68	2.24	7.80
64	E9_Dc	KnownBoundary	0	9.56	12.30	6.77	10.12	26.15	58.89	11.61	24.60	11.69	21.03	15.95	6.30	6.82	33.79	14.71	15.81	11.97	4.31	8.85	6.39	2.90	0.00	0.00
65	ER9f	ExonRegion	0	19.57	15.19	5.85	9.95	40.85	48.85	23.59	15.24	11.46	17.63	9.62	2.44	7.58	22.79	15.25	20.27	14.50	7.57	7.32	11.09	4.06	2.35	4.31
66	E9d_E9f	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
67	ER9g	ExonRegion	0	5.20	20.34	8.69	5.95	17.27	46.18	23.47	21.84	10.89	15.54	13.00	4.33	6.40	14.91	11.61	27.83	16.80	11.09	15.64	12.96	3.41	0.00	3.47
68	ER9h	ExonRegion	0	26.75	23.17	24.49	18.61	48.66	59.01	12.62	38.08	16.39	19.64	25.34	13.45	11.72	20.44	19.27	34.32	13.73	15.37	7.51	16.70	3.43	6.06	3.78
69	E9_Ae	KnownBoundary	0	46.08	31.31	20.58	27.94	75.04	87.56	42.40	45.18	14.21	26.19	35.38	6.30	0.00	12.77	4.94	67.76	28.52	25.29	4.80	18.47	6.05	3.12	0.00
70	ER9i	ExonRegion	0	33.16	28.16	35.05	24.12	45.97	71.41	34.02	36.98	28.41	32.84	49.03	6.30	24.87	28.74	21.36	64.22	34.31	33.93	16.80	23.66	9.02	7.01	2.67
71	E9_Af	KnownBoundary	0	39.41	21.44	28.09	12.49	20.29	46.39	29.06	16.96	20.51	15.20	21.90	0.00	27.76	19.13	24.48	35.12	22.72	17.45	20.61	18.73	5.56	8.45	0.00
72	ER9j	ExonRegion	0	132.48	135.05	345.52	121.66	150.67	268.04	98.96	214.01	219.87	256.89	466.10	165.37	247.85	331.23	328.45	428.40	296.38	280.10	208.08	288.37	173.01	101.62	99.43
73	E9_De	KnownBoundary	0	200.48	191.41	460.04	166.61	147.20	210.90	115.71	262.26	246.24	260.08	488.49	205.12	129.70	327.45	345.14	383.57	385.97	259.83	230.88	401.02	168.84	96.87	126.17
74	E9e_E9g	KnownJunction	0	0.00	0.00	186.39	70.72	0.00	0.00	0.00	109.13	114.73	99.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	105.04	0.00	0.00	0.00	0.00	0.00
75	E9_Df	KnownBoundary	0	3.78	8.68	5.17	6.93	15.11	14.99	2.25	8.71	5.24	1.67	4.74	6.30	6.33	22.13	14.22	11.54	12.81	1.66	0.00	6.20	0.00	3.06	8.62
76	E9f_E9h	KnownJunction	0	88.24	119.72	421.42	98.22	96.60	278.31	110.36	236.30	157.20	209.85	367.62	74.12	190.90	188.30	231.66	222.42	317.72	158.48	155.86	251.51	139.56	96.69	54.03
77	ER9k	ExonRegion	0	141.81	137.88	427.65	136.29	116.66	213.09	88.97	256.50	229.48	255.07	439.54	174.91	168.84	302.09	315.66	331.09	346.59	231.34	208.32	340.42	164.40	93.34	96.91
78	ER9l	ExonRegion	0	109.09	125.91	432.05	128.00	114.61	231.75	90.53	251.49	214.24	240.37	405.99	126.10	162.00	264.80	273.93	278.64	344.26	203.87	156.35	299.02	149.76	91.67	89.08
79	ER9m	ExonRegion	0	24.04	21.28	20.67	17.17	27.38	26.23	14.19	23.22	15.24	17.03	17.52	11.39	9.74	16.03	16.80	20.33	18.74	18.08	13.76	14.67	3.62	4.61	9.76
80	E9_Ah	KnownBoundary	0	37.49	19.67	42.70	31.70	34.80	20.61	5.96	31.42	17.27	13.78	14.95	13.35	0.00	11.95	9.89	18.54	20.38	31.88	23.34	19.88	0.00	3.12	3.93
81	ER9n	ExonRegion	0	112.01	104.24	418.47	131.74	134.90	289.37	103.62	220.83	195.17	254.34	463.28	113.25	198.92	289.19	335.95	365.78	349.08	271.77	200.07	291.52	167.40	99.35	83.78
82	E9g_E10a	KnownJunction	0	249.01	162.41	546.64	151.96	118.51	267.86	157.22	311.79	220.17	291.69	716.71	105.93	154.70	271.59	390.51	476.11	481.44	379.01	352.01	372.38	208.44	136.49	119.68
83	ER10a	ExonRegion	0	122.60	96.26	325.11	123.35	169.69	285.73	116.60	232.07	182.52	222.12	425.43	102.99	165.07	267.35	332.02	314.99	257.89	233.14	195.15	229.74	135.31	82.43	75.52
84	ER10b	ExonRegion	0	0.00	0.00	3.68	1.36	2.68	0.00	0.00	0.00	0.00	0.00	9.66	4.33	0.00	0.00	2.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00