Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC015842.1 Gene 0 12.61 12.25 3.07 12.43 6.96 4.99 6.89 3.42 4.60 5.15 1.09 4.56 3.93 2.18 4.77 7.83 4.66 2.74 6.94 6.48 5.51 4.78 9.04 2 423323 Transcript 0 10.77 8.58 4.09 14.55 5.82 3.69 3.96 3.33 3.48 3.76 0.48 2.14 1.72 0.99 2.81 4.11 2.36 1.49 3.35 3.08 6.93 4.75 7.44 3 ER1a ExonRegion 0 10.88 11.69 2.30 6.45 7.33 5.54 8.68 3.14 4.03 4.70 1.43 5.80 5.17 2.82 5.27 9.36 5.68 3.21 8.69 8.19 4.92 3.74 8.91 4 E1a_E2a KnownJunction 0 3.33 0.00 4.44 5.69 4.33 2.27 1.99 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.46 2.39 3.93 5 I1_AR1 ActiveIntronRegion 0 18.10 3.26 2.68 17.27 2.77 3.02 2.04 0.38 5.37 6.31 0.00 1.83 0.44 0.40 0.40 2.20 5.88 1.89 1.75 1.38 10.20 5.19 9.06 6 I1_AR2 ActiveIntronRegion 0 9.88 2.32 1.23 21.74 0.38 5.50 0.00 0.00 5.29 7.92 0.00 4.33 0.00 1.47 4.70 0.00 8.96 1.14 0.00 0.10 10.49 7.54 11.33 7 I1_AR3 ActiveIntronRegion 0 11.78 6.51 7.68 28.85 2.68 5.75 4.77 0.00 6.09 7.19 0.00 2.45 0.00 2.65 2.13 2.58 10.45 4.74 0.00 0.00 14.10 18.89 11.94 8 I1_AR4 ActiveIntronRegion 0 8.00 10.17 12.25 33.92 2.68 5.50 5.30 0.00 7.14 5.86 0.00 4.33 0.00 1.62 0.00 2.97 13.94 5.54 0.00 0.00 12.98 18.75 9.79 9 I1_AR5 ActiveIntronRegion 0 9.13 11.88 11.16 30.92 2.11 5.50 2.16 1.73 9.95 3.44 0.00 2.51 0.00 0.00 2.75 1.41 10.77 5.54 0.00 0.00 10.09 8.44 5.56 10 I1_SR2 SilentIntronRegion 0 13.51 5.91 7.31 20.00 6.38 5.34 1.79 1.50 7.09 2.93 0.00 0.00 0.00 1.36 1.08 0.00 4.72 0.38 0.00 0.00 8.48 7.45 7.88 11 I1_AR6 ActiveIntronRegion 0 12.33 3.61 3.08 9.99 1.57 7.40 1.16 0.00 1.53 0.87 0.00 0.00 0.00 0.00 1.70 0.00 0.85 0.00 0.00 0.00 2.81 2.98 5.87 12 E2_Aa NovelBoundary 0 45.71 0.00 4.14 15.68 0.00 0.00 6.18 2.26 6.25 1.29 0.00 0.00 0.00 0.00 0.00 4.10 4.39 0.00 0.00 0.00 17.05 2.27 0.00 13 ER2a ExonRegion 0 18.10 14.04 5.55 31.51 5.79 3.24 1.20 4.29 6.42 6.59 0.00 0.62 0.00 0.16 3.14 2.96 1.41 1.24 1.36 1.06 7.41 8.12 9.47 14 IG39_AR1 ActiveIntergenicRegion 0 0.00 2.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.00 0.00 0.00 11.02 4.57 0.51