Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NEURL4 Gene 0 36.17 29.39 99.97 58.11 33.84 93.27 28.95 79.22 62.69 95.45 64.10 19.28 19.91 84.62 84.21 69.67 62.61 101.26 33.92 66.42 57.01 27.25 44.64 2 399464 Transcript 0 18.92 24.27 72.25 39.45 15.68 53.25 16.64 49.88 41.72 54.51 48.85 24.11 17.44 68.17 53.85 50.27 62.78 86.30 14.89 43.60 56.26 25.71 31.65 3 315614 Transcript 0 1.78 2.66 17.44 6.36 5.90 15.24 3.16 22.82 14.68 24.53 11.67 9.45 3.41 14.44 32.39 7.82 9.02 15.88 7.56 22.94 11.12 2.85 7.57 4 ER1a ExonRegion 0 1.85 0.00 0.00 0.00 0.00 2.75 0.00 0.00 1.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.79 0.00 2.20 0.00 0.00 5 ER1b ExonRegion 0 3.16 3.20 17.92 8.00 2.27 9.34 3.03 7.15 15.67 28.71 18.04 4.75 3.89 23.85 20.53 12.77 17.17 18.64 11.05 13.51 15.84 7.39 11.56 6 E1a_E2a KnownJunction 0 3.63 6.18 55.17 13.38 3.65 13.00 4.02 17.70 41.03 61.35 19.06 25.06 12.99 59.98 39.93 17.86 12.34 60.02 17.60 43.53 22.98 13.90 24.33 7 ER2a ExonRegion 0 6.61 7.70 56.07 20.87 8.26 49.76 12.76 43.34 44.36 75.65 47.73 11.14 20.09 71.89 65.09 53.95 61.00 110.15 26.14 53.81 54.30 27.36 40.53 8 E2a_E3a KnownJunction 0 28.60 14.34 49.94 29.37 8.66 54.74 31.27 34.83 31.97 59.26 55.54 0.00 12.82 71.34 57.48 65.28 70.13 117.35 7.15 64.94 57.76 19.90 59.16 9 E2a_E4a NovelJunction 0 0.00 8.55 21.88 3.40 4.33 22.83 10.55 25.79 24.16 11.07 7.00 0.00 0.00 10.60 19.16 0.00 0.00 17.62 0.00 8.37 6.24 3.00 4.35 10 E3_Aa NovelBoundary 0 17.34 6.18 4.67 10.09 3.57 23.74 2.25 4.11 7.75 17.97 14.64 0.00 0.00 7.71 9.89 12.39 0.00 10.78 4.05 2.88 0.00 2.82 0.00 11 ER3a ExonRegion 1 15.55 14.08 53.69 20.51 13.26 71.93 23.35 41.46 32.54 62.47 55.67 4.92 13.36 100.57 74.16 60.48 67.72 107.06 33.30 59.96 57.36 15.91 42.14 12 E3a_E4a KnownJunction 0 18.67 21.18 59.58 23.87 26.06 67.40 27.34 57.71 37.44 80.59 58.12 6.30 12.99 128.97 103.10 64.68 65.36 103.63 57.13 94.28 72.77 17.02 40.63 13 ER4a ExonRegion 0 24.65 23.48 72.65 42.49 35.16 113.60 30.00 74.23 70.05 111.84 75.26 27.71 27.23 121.01 74.68 78.64 78.60 114.66 47.73 71.25 82.90 32.38 61.45 14 E4a_E5a KnownJunction 0 33.19 33.42 122.85 44.78 66.81 177.97 60.28 65.23 64.96 115.29 77.86 37.81 66.72 78.46 76.40 124.41 97.05 138.95 56.10 83.73 96.13 42.31 33.38 15 ER5a ExonRegion 0 21.92 30.23 104.35 49.55 51.34 112.16 36.67 74.65 84.09 121.34 80.61 41.59 46.40 100.07 66.26 94.34 94.96 132.53 50.60 62.02 72.15 39.94 53.17 16 E5a_E6a KnownJunction 0 23.63 41.70 120.25 59.03 70.03 85.12 26.06 86.09 97.13 117.82 69.81 24.61 54.05 92.00 42.15 85.36 83.96 122.62 22.02 100.48 87.85 27.68 21.77 17 ER6a ExonRegion 0 18.53 20.15 111.49 55.34 42.96 76.65 31.64 81.92 76.15 95.57 66.54 36.05 43.69 96.46 91.37 91.80 101.10 87.20 49.89 89.82 65.57 35.26 62.99 18 E6a_E7a KnownJunction 0 31.78 35.13 171.82 96.52 60.10 171.83 46.24 135.87 105.55 113.01 130.24 38.71 40.26 94.30 85.42 157.91 114.91 195.99 124.52 115.56 64.43 69.44 97.31 19 ER7a ExonRegion 0 27.28 28.75 114.83 64.78 50.66 133.62 35.67 116.28 89.57 125.28 112.24 31.20 46.51 122.39 90.65 116.44 113.36 186.45 78.41 81.87 80.66 49.06 53.74 20 E7a_E8a KnownJunction 0 27.78 41.24 90.33 66.36 35.91 114.65 31.18 113.24 92.04 136.43 95.60 18.91 42.85 118.96 108.91 120.48 86.96 170.50 55.34 84.18 67.89 28.84 47.46 21 ER8a ExonRegion 0 23.98 22.93 90.28 47.14 36.44 97.49 27.84 74.51 72.37 99.33 69.53 22.69 33.38 92.94 100.09 70.83 70.33 110.38 44.74 74.16 62.47 29.05 45.46 22 E8_Da NovelBoundary 0 3.33 0.00 17.09 4.56 15.11 10.51 5.92 2.26 3.96 2.79 2.68 0.00 0.00 9.24 0.00 14.36 8.04 15.88 19.20 3.26 8.83 7.84 11.35 23 E8a_E9a KnownJunction 0 9.78 27.69 71.67 34.93 23.17 58.38 17.89 58.61 70.17 83.89 61.28 14.70 26.30 76.11 113.48 55.71 52.83 96.25 41.70 79.90 59.31 14.70 38.58 24 I8 Intron 0 13.36 2.96 6.21 9.86 10.40 37.85 9.97 10.01 5.36 12.45 7.51 0.87 1.88 5.45 14.63 17.32 5.61 11.39 13.92 5.17 7.49 3.54 11.41 25 I8_SR1 SilentIntronRegion 0 17.01 3.77 7.90 12.56 13.23 48.18 12.69 12.74 6.83 15.84 9.56 1.10 2.39 6.94 16.72 22.05 7.14 14.49 17.72 6.58 9.54 4.51 14.52 26 E9_Aa NovelBoundary 0 10.15 6.58 24.45 20.68 11.12 24.87 4.15 33.35 21.33 36.42 43.38 22.81 19.97 31.84 8.90 8.72 20.38 23.05 9.22 14.51 22.92 12.19 8.54 27 ER9a ExonRegion 0 20.71 23.74 107.33 67.33 32.48 101.23 30.15 101.16 96.17 128.50 99.95 32.59 34.58 112.16 136.01 107.81 82.40 175.57 76.54 93.50 71.71 33.12 67.04 28 E9a_E10a KnownJunction 0 16.97 42.30 125.57 67.89 58.23 133.33 41.69 129.63 113.19 147.07 83.55 40.06 6.82 76.05 82.21 75.11 56.01 148.98 55.34 84.37 80.13 11.51 56.17 29 E10_Aa NovelBoundary 0 0.00 0.00 13.39 17.75 0.00 6.98 4.24 7.56 6.77 13.40 5.37 5.70 6.17 9.59 8.90 8.12 0.00 18.57 4.14 9.08 5.44 7.84 0.00 30 ER10a ExonRegion 0 26.60 23.84 97.45 71.03 48.85 151.82 39.33 93.30 87.94 119.69 84.15 31.46 27.81 93.56 128.70 87.75 76.50 95.89 60.15 97.30 60.06 28.35 55.32 31 E10a_E11a KnownJunction 0 10.08 16.64 80.96 54.17 14.09 78.59 28.53 52.49 81.51 114.54 58.33 23.86 5.68 56.04 70.83 73.31 49.56 78.06 28.89 80.09 51.65 13.47 34.15 32 E11_Aa NovelBoundary 0 10.15 0.00 10.17 3.03 11.54 25.95 9.45 12.03 5.03 17.22 9.48 6.30 0.00 10.30 0.00 11.62 0.00 19.98 13.08 16.30 7.04 5.33 3.93 33 ER11a ExonRegion 0 19.04 28.32 82.12 38.78 20.73 99.99 29.24 63.58 58.94 96.45 55.46 23.03 19.13 74.25 83.44 66.57 61.99 112.24 36.27 66.58 63.73 29.39 44.03 34 E11a_E12a KnownJunction 0 42.67 30.92 86.93 37.06 29.29 112.21 36.39 62.72 72.92 94.23 36.96 12.30 21.91 66.81 81.46 68.70 62.46 82.74 23.91 59.32 86.67 34.84 71.62 35 ER12a ExonRegion 0 33.69 36.60 116.45 45.84 39.40 107.95 41.89 78.73 74.21 113.70 59.95 19.78 25.59 92.65 106.65 93.02 74.44 132.80 39.71 62.70 84.17 34.10 49.19 36 E12a_E13a KnownJunction 0 60.60 63.67 188.14 56.87 53.48 107.04 39.30 120.63 95.43 163.37 70.91 30.91 47.07 134.97 120.90 66.73 65.45 120.55 46.02 105.34 115.71 35.94 67.27 37 ER13a ExonRegion 0 28.01 35.92 162.26 73.63 37.15 131.44 37.12 109.16 94.75 173.05 89.26 40.60 44.46 100.99 86.28 89.51 102.63 126.44 36.65 84.30 99.11 42.18 43.55 38 E13a_E14a KnownJunction 0 35.19 47.16 221.78 118.10 52.21 211.36 73.22 138.09 112.09 221.69 119.24 40.96 45.13 116.31 98.15 173.20 133.61 212.53 96.19 73.63 105.27 52.48 64.36 39 ER14a ExonRegion 0 24.57 38.20 144.64 74.03 63.47 191.50 48.27 105.65 102.33 162.95 128.28 31.46 60.26 123.21 134.71 136.60 108.01 169.74 57.01 92.57 132.11 41.67 59.51 40 E14_Da NovelBoundary 0 6.67 2.83 45.59 25.14 7.72 30.44 10.60 22.14 9.78 24.07 2.68 0.00 0.00 12.42 32.02 8.20 8.79 31.75 16.66 6.52 11.43 8.21 11.87 41 E14a_E15a KnownJunction 0 14.22 53.48 155.38 77.18 80.14 140.03 64.30 108.27 114.78 167.11 128.66 48.47 48.21 124.20 101.00 135.61 106.12 192.51 61.55 101.63 127.45 34.35 42.85 42 I14 Intron 0 9.57 3.45 33.28 22.95 4.91 20.73 6.36 12.37 8.06 14.97 5.46 2.52 2.42 11.52 12.34 10.92 4.20 12.58 2.70 9.62 7.79 4.71 7.47 43 I14_SR1 SilentIntronRegion 0 2.63 2.83 25.40 10.32 3.73 19.25 4.37 4.43 4.06 13.94 4.54 2.56 6.61 9.84 16.62 11.57 6.20 8.20 0.00 6.29 6.21 0.79 6.27 44 I14_SR2 SilentIntronRegion 0 11.32 3.57 35.10 25.97 5.24 21.09 6.84 14.35 9.04 15.20 5.73 2.52 1.51 11.94 11.35 10.83 3.71 13.68 3.37 10.51 8.19 5.64 7.77 45 E15_Aa NovelBoundary 0 16.52 6.18 31.87 44.15 18.85 38.44 8.13 13.23 12.82 17.57 6.90 6.00 19.80 14.24 4.33 15.81 4.11 19.40 4.24 9.40 6.30 0.00 12.04 46 ER15a ExonRegion 0 18.44 39.92 159.94 91.17 46.29 116.23 43.57 115.83 94.52 146.92 112.90 45.26 36.42 130.87 123.80 109.55 107.45 163.18 45.01 113.45 103.65 38.67 57.37 47 E15a_E16a KnownJunction 0 3.56 5.33 34.27 12.72 11.80 25.89 6.32 45.63 29.37 46.77 22.37 18.91 6.82 27.25 48.83 15.64 18.05 31.75 8.75 42.70 22.24 5.69 12.21 48 E15b_E16a KnownJunction 0 33.04 42.30 115.05 59.97 30.98 78.76 28.31 75.04 61.92 82.68 82.44 42.01 28.08 110.31 73.06 79.98 94.81 144.34 22.78 65.20 90.19 43.11 46.01 49 ER15b ExonRegion 0 21.87 30.50 101.71 58.38 16.05 78.24 21.62 74.61 62.17 80.86 64.11 30.31 24.23 94.20 88.49 70.84 93.53 114.56 19.11 65.60 76.40 34.03 48.94 50 ER16a ExonRegion 0 28.96 38.72 163.30 96.98 36.28 121.10 47.84 123.37 86.56 128.63 103.64 35.78 29.38 127.70 115.32 110.44 107.10 119.66 42.04 116.83 78.53 30.16 61.65 51 E16a_E17a KnownJunction 0 26.75 27.69 183.14 100.29 30.73 191.54 49.90 107.53 69.24 114.83 98.50 39.76 15.10 90.53 110.76 81.09 100.33 121.75 15.72 77.02 64.87 35.03 58.47 52 ER17a ExonRegion 0 21.59 27.43 121.93 59.74 33.92 107.68 42.71 107.10 65.06 115.11 81.86 37.51 38.58 114.97 106.01 78.37 69.14 133.84 31.16 97.30 66.70 27.00 52.30 53 E17_Da NovelBoundary 0 20.74 12.23 17.56 10.89 7.98 11.24 3.93 26.00 1.50 2.63 9.58 0.00 0.00 7.12 0.00 4.02 22.63 14.05 3.76 6.46 8.90 2.63 8.28 54 E17a_E18a KnownJunction 0 29.86 49.60 145.26 90.43 31.24 159.57 36.79 108.11 60.50 123.75 96.97 33.46 21.26 149.04 133.38 85.79 58.16 109.69 38.50 107.70 64.12 16.04 55.66 55 E18_Aa NovelBoundary 0 3.78 6.25 24.75 8.42 8.66 15.22 4.11 8.79 7.03 5.91 6.95 0.00 0.00 14.19 8.90 27.60 9.54 15.42 0.00 3.26 8.09 5.88 12.89 56 ER18a ExonRegion 0 24.93 32.39 106.28 56.24 52.40 108.08 33.94 82.55 59.19 103.53 59.29 16.50 14.75 105.15 94.04 57.10 53.39 100.60 30.33 79.92 59.47 28.67 41.27 57 E18a_E19a KnownJunction 0 41.49 24.80 119.51 55.84 60.78 96.65 32.24 88.23 62.93 112.26 39.33 0.00 6.01 60.98 95.68 57.34 58.44 100.23 37.65 72.87 69.99 25.72 47.29 58 ER19a ExonRegion 1 58.73 36.77 127.53 49.48 53.87 99.90 41.51 98.63 62.17 114.31 75.01 13.08 5.83 85.93 98.61 58.66 68.75 113.80 30.73 67.01 68.94 25.36 49.24 59 E19a_E20a KnownJunction 1 87.50 39.93 121.31 85.47 100.34 212.09 59.35 88.72 76.33 113.17 67.12 0.00 0.00 103.18 59.83 71.09 87.14 125.11 25.88 107.32 84.39 34.72 60.35 60 ER20a ExonRegion 0 45.45 39.35 174.25 103.84 56.82 126.71 41.09 126.57 95.40 148.68 91.03 14.73 19.89 113.70 109.67 85.27 90.51 119.02 43.00 94.96 83.55 32.59 77.93 61 E20a_E21a KnownJunction 1 64.38 31.77 169.72 132.55 83.28 126.69 59.93 119.03 125.29 173.10 120.24 17.86 0.00 90.82 107.30 133.98 69.38 126.93 64.19 130.97 89.39 49.78 102.95 62 ER21a ExonRegion 0 67.63 39.61 185.13 127.14 86.05 150.57 56.30 148.45 121.06 167.08 112.98 16.40 15.72 133.69 113.85 117.88 90.32 155.91 50.71 103.09 84.74 42.15 75.98 63 E21a_E22a KnownJunction 0 91.35 42.10 176.96 137.41 71.56 118.45 48.18 140.97 113.19 143.52 82.44 34.96 6.33 107.72 108.78 81.94 93.60 87.67 47.81 80.09 44.23 29.58 59.84 64 ER22a ExonRegion 0 73.48 56.21 160.00 102.55 58.92 135.56 42.13 116.62 91.42 128.57 79.30 26.33 11.74 125.19 97.62 96.77 88.83 108.23 34.78 92.68 64.36 41.79 69.50 65 E22a_E23a KnownJunction 0 78.01 56.96 161.50 90.73 74.36 127.14 54.45 78.78 73.12 104.60 52.59 12.60 6.82 74.17 46.60 59.22 56.19 112.71 27.58 62.77 53.68 11.39 37.47 66 E22a_E24a NovelJunction 0 0.00 0.00 17.89 4.96 0.00 5.74 2.08 4.23 8.30 0.00 5.05 0.00 0.00 2.77 0.00 0.00 0.00 2.40 0.00 3.26 0.00 0.00 0.00 67 ER23a ExonRegion 0 32.37 15.59 70.68 42.48 20.22 71.95 22.66 37.73 33.80 49.57 18.64 4.88 6.10 45.03 36.57 29.95 29.52 52.95 15.04 38.11 21.47 13.97 28.42 68 E23a_E24a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 69 ER24a ExonRegion 0 31.36 26.41 7.77 8.18 11.34 39.99 14.29 4.50 1.40 2.36 0.00 0.00 0.00 2.95 4.45 0.61 0.00 9.43 1.63 4.38 0.00 2.53 4.77 70 E24a_E25a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 71 ER25a ExonRegion 0 31.47 16.34 2.16 0.00 1.88 16.47 4.74 0.00 0.00 0.81 0.91 0.00 0.00 0.00 0.00 0.00 0.00 0.21 0.62 0.00 0.00 0.98 0.00 72 E25a_E26a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 73 ER26a ExonRegion 0 44.29 12.92 0.00 0.00 0.94 5.88 0.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 74 E26a_E27a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 75 Ix Intron 0 15.64 3.88 16.10 12.11 22.32 15.73 12.62 22.71 11.40 13.44 13.82 6.68 3.68 28.55 25.26 23.37 14.16 20.58 7.59 8.11 6.83 4.97 5.60 76 Ix_SR1 SilentIntronRegion 0 13.82 2.63 16.36 10.86 23.06 12.01 11.60 16.25 10.83 9.84 15.12 4.88 6.81 33.69 17.86 25.85 12.62 17.88 4.50 8.03 6.03 5.25 3.25 77 Ix_AR1 ActiveIntronRegion 0 17.61 5.10 16.15 13.48 22.04 19.47 13.79 29.12 12.15 17.03 12.84 8.46 0.85 24.26 32.55 21.51 15.84 23.43 10.60 8.34 7.67 4.79 7.88 78 ER27a ExonRegion 0 44.07 22.46 2.65 2.29 9.38 60.52 20.55 3.53 2.34 1.44 1.74 0.00 0.00 0.00 5.24 1.74 0.00 10.33 1.72 0.79 0.60 0.00 2.78 79 E27a_E28a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 80 ER28a ExonRegion 0 37.52 26.11 67.61 49.81 11.44 71.69 16.57 47.82 35.07 34.70 20.21 2.19 5.42 38.40 51.56 47.41 22.23 62.93 14.43 30.59 16.09 10.53 25.03 81 E28a_E29a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 82 ER29a ExonRegion 0 88.46 55.01 155.02 110.54 46.07 114.66 31.70 132.42 74.82 113.29 80.53 19.24 12.00 91.50 124.09 86.44 58.48 106.51 32.53 78.85 51.60 34.07 47.93 83 ER29b ExonRegion 0 0.00 0.00 0.61 0.00 0.00 4.58 0.00 0.00 0.00 2.29 0.97 0.00 0.00 1.62 15.96 0.00 0.00 0.00 6.37 3.19 0.00 0.00 2.94