Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 INCA1 Gene 0 7.56 5.59 11.48 7.76 9.46 13.30 5.20 13.15 11.17 9.89 12.42 25.89 16.11 23.49 11.10 18.58 13.68 8.00 5.46 8.59 14.48 4.91 7.24 2 396829 Transcript 0 4.28 5.28 9.27 4.30 5.55 11.36 8.55 1.88 3.22 5.67 4.92 10.82 13.51 9.64 9.18 10.79 5.20 6.09 1.77 4.14 14.37 2.54 5.55 3 355025 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 0 0.94 0.00 0.81 0.84 1.19 0.81 1.17 0.00 0.85 0.75 1.71 0.00 0.00 0.51 0.00 0.00 0.00 0.00 0.00 0.00 0.98 0.00 2.60 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER2a ExonRegion 0 0.75 0.00 1.29 2.53 0.94 0.98 0.93 6.36 4.53 5.43 1.02 3.15 1.36 0.44 0.36 0.52 0.00 1.94 0.00 1.50 0.78 1.10 2.07 7 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E3_Aa NovelBoundary 0 10.96 0.00 0.00 0.00 8.66 5.68 0.00 2.55 1.77 1.02 0.00 0.00 0.00 0.00 0.00 3.33 0.00 0.00 0.00 0.00 3.15 0.00 0.00 9 ER3a ExonRegion 0 2.56 0.22 0.15 0.91 0.00 0.25 0.90 2.51 1.33 1.83 4.27 1.58 0.00 0.89 0.00 0.00 0.00 1.64 0.00 0.08 3.52 3.79 2.54 10 E3a_E4a KnownJunction 0 2.67 2.63 0.00 1.80 0.00 0.00 0.00 6.57 3.53 2.79 4.47 6.30 0.00 0.00 0.00 0.00 0.00 5.06 0.00 0.00 3.15 6.25 7.51 11 E4_Aa NovelBoundary 0 0.00 18.75 21.05 20.74 24.02 74.79 11.08 9.24 13.11 18.32 12.11 18.91 13.64 16.25 31.77 38.45 18.61 18.82 0.00 8.50 18.90 8.82 0.00 12 ER4a ExonRegion 0 8.93 6.49 18.90 8.42 14.34 24.40 10.14 6.20 9.75 9.36 10.77 42.91 22.92 17.68 23.01 21.33 17.72 4.98 9.98 5.66 15.27 4.84 12.57 13 E4_Da NovelBoundary 1 29.78 3.22 31.02 26.17 57.89 46.85 11.97 26.62 27.08 19.88 5.00 71.87 60.55 39.32 49.45 23.07 33.19 12.31 12.42 11.57 5.75 0.00 3.33 14 E4a_E5a KnownJunction 0 3.78 3.16 3.16 0.00 0.00 0.00 1.85 8.67 0.00 2.71 0.00 0.00 0.00 2.41 0.00 0.00 0.00 0.00 0.00 0.00 5.37 0.00 0.00 15 I4 Intron 0 17.99 6.54 19.72 26.59 32.58 51.40 9.43 16.57 19.03 15.71 14.65 48.44 30.36 32.33 26.03 32.09 31.85 9.30 10.98 9.78 19.73 6.22 17.54 16 I4_AR1 ActiveIntronRegion 0 18.14 6.60 19.89 26.84 32.88 51.86 9.51 16.72 19.19 15.85 14.79 48.86 30.63 32.62 26.24 32.38 32.11 9.38 11.08 9.85 19.91 6.27 17.70 17 E5_Aa NovelBoundary 0 58.83 28.81 18.21 32.80 117.23 162.58 60.15 33.52 31.74 31.32 20.48 94.68 60.87 100.83 53.53 57.93 43.67 18.74 13.93 32.47 35.21 7.96 35.77 18 ER5a ExonRegion 0 2.06 1.78 3.16 0.17 0.67 0.64 4.37 5.19 0.34 2.58 0.00 8.55 0.12 8.12 0.29 3.12 0.00 1.71 0.00 0.00 4.30 2.14 0.29 19 E5_Da NovelBoundary 1 0.00 11.77 26.23 29.33 21.56 73.59 14.97 22.51 20.95 25.63 11.42 61.52 39.77 42.56 17.80 52.55 4.77 13.68 9.51 13.87 35.21 15.00 0.00 20 E5a_E6a KnownJunction 0 0.00 0.00 5.38 0.00 3.14 0.00 6.71 0.00 0.00 1.42 0.00 0.00 0.00 0.00 0.00 3.42 0.00 3.98 0.00 0.00 3.15 0.00 0.00 21 E5a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 I5 Intron 0 9.78 8.22 15.46 23.45 35.53 47.30 14.01 19.83 21.61 17.77 17.48 28.18 26.02 48.07 14.98 33.18 26.05 10.96 3.68 12.69 18.64 5.21 12.43 23 I5_SR1 SilentIntronRegion 0 9.86 8.28 15.58 23.63 35.80 47.66 14.12 19.97 21.77 17.91 17.61 28.40 26.20 48.40 15.09 33.42 26.24 11.04 3.71 12.79 18.78 5.25 12.53 24 E6_Aa NovelBoundary 1 3.78 6.38 35.81 33.46 45.84 121.29 36.13 38.24 21.70 25.79 19.95 30.61 72.88 39.38 13.35 20.25 24.87 11.86 12.14 14.89 14.27 0.00 19.21 25 ER6a ExonRegion 0 8.56 10.57 13.16 8.59 7.97 22.72 10.39 3.76 6.44 9.92 9.83 21.65 27.02 19.28 18.35 18.16 10.40 8.19 3.53 8.28 25.58 5.07 11.11 26 E6_Ab KnownBoundary 0 16.45 24.14 26.88 15.88 28.27 46.62 14.53 11.17 18.03 23.40 13.64 37.96 39.12 34.43 42.90 25.81 21.79 14.63 3.58 17.77 19.77 9.19 10.33 27 ER6b ExonRegion 0 14.51 13.05 17.11 15.22 23.62 35.73 9.00 15.93 13.19 12.51 21.31 39.94 41.28 42.00 16.91 31.71 26.89 12.25 10.76 8.98 17.47 7.66 6.50 28 E6_Da NovelBoundary 0 20.52 11.77 22.44 18.81 31.41 46.00 4.50 26.78 35.10 27.64 33.48 47.72 56.00 69.05 15.08 30.93 26.65 19.57 0.00 18.09 26.01 3.12 15.54 29 E6a_E7a KnownJunction 0 0.00 6.38 1.69 0.00 0.00 0.00 0.00 0.00 2.49 0.00 2.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 30 I6 Intron 0 9.70 11.19 20.09 24.21 27.29 52.12 10.47 26.56 30.38 22.13 25.25 74.28 52.51 53.00 26.35 53.48 41.61 30.20 8.03 23.17 33.34 9.31 20.19 31 I6_SR1 SilentIntronRegion 0 4.08 1.54 3.72 5.77 16.84 32.52 9.07 5.40 7.21 6.50 12.47 22.28 29.46 21.85 18.50 19.07 12.76 1.80 0.00 8.51 9.84 1.70 5.87 32 I6_AR1 ActiveIntronRegion 0 11.03 13.44 23.92 28.53 29.82 56.86 10.84 31.51 35.80 25.80 28.30 86.51 58.03 60.37 28.27 61.59 48.40 36.82 9.90 26.62 38.86 11.09 23.56 33 E7_Aa NovelBoundary 0 6.59 6.58 30.96 26.20 34.21 45.20 12.23 25.96 27.81 21.68 39.38 145.25 77.92 55.98 32.76 54.17 31.32 35.69 4.80 16.68 30.83 6.25 4.18 34 ER7a ExonRegion 0 21.02 15.80 24.88 19.01 14.85 23.03 8.14 32.52 33.17 25.16 36.90 85.91 49.08 61.77 22.37 53.01 32.53 28.36 9.81 20.29 42.49 10.77 18.04 35 E7_Da NovelBoundary 1 25.34 25.52 29.72 27.84 31.41 51.56 11.88 39.88 25.61 17.54 19.53 85.83 74.02 56.86 32.39 47.08 22.16 27.07 0.00 26.78 47.14 8.51 7.26 36 E7a_E8a KnownJunction 0 3.63 0.00 1.42 2.06 8.66 0.00 0.00 9.08 7.52 2.90 4.90 0.00 0.00 2.47 0.00 0.00 0.00 1.66 0.00 0.00 2.97 5.45 0.00 37 E8_Aa NovelBoundary 0 17.11 6.64 46.83 27.87 27.16 43.50 7.46 40.66 34.26 30.22 19.43 43.06 26.78 82.52 52.29 57.51 39.36 20.73 8.94 31.32 37.25 19.96 4.35 38 ER8a ExonRegion 0 7.26 4.89 14.85 7.91 11.86 12.99 5.72 18.47 12.99 10.88 13.82 22.13 10.28 31.66 14.12 22.11 17.81 7.44 7.64 14.29 17.09 6.04 7.75 39 IG47 Intergenic 0 4.30 2.98 7.62 2.75 3.62 23.79 5.08 4.36 7.06 11.38 10.69 8.53 3.58 16.24 12.73 18.44 13.78 7.99 5.03 7.44 14.67 2.59 6.63 40 IG47_AR1 ActiveIntergenicRegion 0 4.32 3.00 7.66 2.77 3.64 23.90 5.10 4.38 7.09 11.43 10.73 8.57 3.60 16.32 12.78 18.53 13.84 8.02 5.05 7.48 14.73 2.60 6.66