Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMEM107 Gene 0 36.79 17.57 15.02 9.15 82.03 82.62 36.18 54.30 37.31 27.78 26.74 71.23 16.47 42.89 39.48 36.45 25.53 12.17 8.19 16.56 22.97 20.41 18.26 2 431792 Transcript 0 0.60 0.00 3.24 0.00 5.05 3.21 1.67 8.46 7.24 6.76 11.11 6.08 0.00 1.64 3.57 8.13 10.05 0.53 7.66 6.84 7.44 5.36 1.05 3 417073 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 437139 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 449985 Transcript 0 0.00 0.00 1.83 3.46 6.45 5.00 4.50 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 4.36 4.68 0.00 0.00 0.00 3.15 0.00 3.41 6 316425 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 415860 Transcript 0 2.46 1.93 1.41 1.16 9.54 7.17 3.22 3.34 2.67 3.05 0.88 11.77 2.27 9.03 10.07 15.46 1.87 7.59 5.12 4.19 0.72 1.23 3.05 8 ER1a ExonRegion 0 1.21 0.00 0.00 0.00 1.53 4.32 1.61 0.00 0.71 0.00 0.00 0.00 0.00 0.93 2.69 8.92 0.00 1.06 2.05 2.43 0.00 2.08 2.10 9 ER1b ExonRegion 0 35.56 12.33 3.91 3.77 34.08 172.16 39.01 24.25 19.93 14.08 24.57 3.27 1.53 60.30 61.90 75.55 45.91 12.88 18.24 16.31 39.29 34.06 45.76 10 E1_Ac KnownBoundary 0 22.60 0.00 2.72 1.33 7.56 23.34 0.00 23.82 12.56 9.46 14.85 0.00 5.84 22.54 19.28 24.27 14.31 14.09 4.80 2.56 5.19 3.12 7.51 11 ER1c ExonRegion 0 7.01 1.14 5.74 3.01 3.73 11.77 2.05 26.21 15.88 14.22 27.94 10.02 2.67 22.11 34.38 20.04 39.11 13.00 4.07 9.95 47.53 7.85 9.73 12 E1_Da KnownBoundary 1 6.37 0.00 2.87 0.00 3.57 0.00 2.16 7.27 3.59 5.94 0.00 0.00 0.00 4.89 10.75 29.14 0.00 18.65 4.80 9.59 0.00 3.12 8.71 13 E1a_E2a KnownJunction 0 3.63 0.00 5.50 6.09 0.00 8.46 0.00 23.91 15.86 9.11 51.70 0.00 0.00 43.44 66.26 49.73 62.18 21.10 12.05 12.72 81.98 32.82 20.57 14 E1a_E5a KnownJunction 0 0.00 0.00 6.48 0.00 8.57 2.10 1.72 16.92 13.77 13.51 22.22 12.15 0.00 2.35 4.45 7.35 20.10 0.00 13.27 11.25 14.89 8.63 0.00 15 ER1d ExonRegion 1 1.06 0.69 1.31 0.69 5.98 9.23 5.53 3.79 3.67 4.26 1.31 0.00 1.31 7.06 11.68 21.12 1.17 14.18 3.91 5.35 0.75 3.24 7.17 16 E1_Db NovelBoundary 0 7.33 0.00 1.83 0.00 7.81 43.21 12.54 0.00 1.50 4.70 0.00 7.05 0.00 4.71 4.45 12.90 13.56 1.95 0.00 6.33 8.03 2.88 3.24 17 E1b_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E2_Aa NovelBoundary 0 20.89 5.66 4.38 1.63 28.61 43.95 21.07 7.27 6.31 4.49 5.05 0.00 0.00 7.30 15.08 8.72 0.00 6.59 0.00 8.76 3.15 0.00 7.85 19 ER2a ExonRegion 0 15.90 3.50 4.49 3.93 6.49 13.73 3.12 19.47 13.08 8.65 34.68 34.95 14.35 75.12 90.28 73.69 37.81 14.97 12.84 11.39 49.84 41.64 38.05 20 E2_Da NovelBoundary 0 3.78 3.03 2.81 3.30 6.79 7.15 7.20 11.87 10.53 8.86 7.21 0.00 5.84 14.54 40.79 12.13 0.00 14.88 3.86 5.24 8.96 0.00 3.59 21 E2a_E3a KnownJunction 0 6.59 0.00 1.83 2.73 0.00 2.50 1.68 6.98 0.00 1.67 0.00 0.00 0.00 6.89 4.45 11.19 0.00 0.00 3.86 0.00 8.96 3.00 11.61 22 E2a_E3c KnownJunction 1 0.00 10.06 3.87 3.96 12.05 19.70 0.00 23.12 7.09 10.50 19.32 5.55 0.00 53.15 56.37 76.99 22.16 14.14 18.26 6.14 18.59 33.37 66.33 23 E3_Ac NovelBoundary 0 10.15 0.00 4.35 3.26 15.70 20.33 11.48 8.63 16.41 5.43 5.21 6.75 0.00 4.94 11.37 14.44 0.00 9.20 0.00 6.26 8.28 0.00 4.01 24 ER3a ExonRegion 0 4.23 0.00 2.45 2.73 3.86 9.37 2.50 8.64 1.92 2.68 1.93 8.66 0.00 8.30 3.55 13.87 0.00 0.62 3.19 0.00 11.02 2.08 10.77 25 ER3b ExonRegion 1 5.08 0.61 3.19 3.00 9.90 16.69 7.28 10.54 4.45 5.85 4.25 9.96 0.94 12.51 14.80 22.89 1.32 3.70 2.23 1.06 16.09 5.00 13.51 26 ER3c ExonRegion 0 16.23 5.12 12.87 5.51 64.00 78.89 26.29 34.00 22.91 22.17 28.12 23.08 14.16 64.51 69.37 59.53 28.82 18.11 9.62 13.09 33.12 12.63 22.38 27 E3_Da KnownBoundary 0 24.15 6.12 17.89 4.13 105.35 68.48 53.35 20.21 14.29 19.96 15.42 36.31 6.82 41.79 33.38 19.23 16.55 16.33 0.00 27.48 5.87 0.00 11.35 28 E3a_E4a KnownJunction 0 15.85 2.83 3.10 0.00 51.27 108.12 16.52 15.53 11.75 14.40 25.01 24.31 6.82 40.67 57.11 28.37 29.83 1.58 14.40 8.76 43.43 25.11 15.11 29 ER3d ExonRegion 0 9.93 6.52 9.73 4.63 78.46 43.74 31.66 15.45 10.88 14.72 8.07 25.02 9.24 18.70 23.21 13.20 2.82 8.48 1.55 15.68 5.38 1.07 2.55 30 E3_Db KnownBoundary 0 9.33 5.00 3.05 7.19 102.12 39.58 9.19 14.33 10.94 9.37 0.00 30.76 0.00 11.77 15.20 11.19 0.00 13.10 4.61 5.31 0.00 2.88 0.00 31 ER3e ExonRegion 1 6.32 5.08 2.93 2.78 22.64 12.28 4.15 6.23 4.34 4.89 1.32 35.32 5.49 20.02 18.51 25.26 4.43 8.58 11.44 7.22 1.42 0.44 1.97 32 E3_Dc NovelBoundary 0 20.15 5.66 11.15 6.03 43.72 27.20 9.10 21.60 23.47 17.86 4.26 6.30 0.00 24.55 0.00 38.20 22.63 10.90 8.47 18.60 5.87 5.82 8.19 33 I3 Intron 0 6.49 7.10 4.35 1.38 12.30 17.17 10.03 9.87 8.15 8.44 8.89 10.99 1.64 21.35 10.39 21.76 16.30 11.73 2.71 9.06 5.44 2.66 5.25 34 I3_AR1 ActiveIntronRegion 0 6.51 7.12 4.37 1.39 12.34 17.23 10.06 9.90 8.18 8.47 8.92 11.03 1.65 21.43 10.42 21.84 16.36 11.77 2.72 9.09 5.46 2.67 5.27 35 E4_Aa NovelBoundary 0 11.26 14.60 7.42 3.36 42.02 24.47 23.63 19.80 16.70 3.33 5.11 0.00 6.66 21.43 14.71 43.49 9.54 11.07 7.72 6.01 6.18 0.00 3.93 36 ER4a ExonRegion 0 33.28 8.43 9.00 2.78 64.75 94.61 33.29 25.97 7.77 17.64 37.23 17.77 3.58 64.60 73.52 43.29 33.40 10.92 3.65 17.53 37.32 25.58 7.96 37 E4_Da NovelBoundary 0 31.04 9.08 8.75 5.53 84.38 57.98 38.02 40.50 9.69 16.63 33.53 0.00 0.00 55.15 86.16 40.07 58.72 13.97 0.00 23.91 37.38 13.53 8.28 38 E4a_E5a KnownJunction 0 0.00 0.00 1.83 3.46 6.45 5.00 4.50 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 4.36 4.68 0.00 0.00 0.00 3.15 0.00 3.41 39 E4_Db NovelBoundary 0 12.97 0.00 9.22 4.13 37.86 28.68 11.79 8.87 8.07 10.74 7.74 0.00 6.82 16.66 10.14 8.54 13.18 7.63 0.00 6.26 2.53 2.94 0.00 40 E4b_E5a KnownJunction 0 33.93 2.76 0.00 3.26 23.34 21.75 14.84 35.94 10.82 9.48 29.32 18.76 13.64 52.33 57.48 27.69 41.70 8.46 0.00 0.00 45.72 22.35 0.00 41 ER4b ExonRegion 0 27.51 3.68 4.67 4.09 32.87 37.20 19.48 33.50 10.59 15.18 26.23 14.23 7.82 55.99 56.23 26.32 45.74 7.74 0.00 6.99 43.55 20.84 5.59 42 I4 Intron 0 13.11 11.76 6.03 2.10 24.86 28.02 19.14 15.95 6.84 7.41 8.38 4.00 3.19 15.13 13.99 19.64 8.86 5.69 0.66 14.06 5.92 1.29 4.85 43 I4_AR1 ActiveIntronRegion 0 13.22 11.85 6.08 2.11 25.05 28.25 19.28 16.09 6.90 7.47 8.45 4.03 3.22 15.23 14.10 19.80 8.93 5.74 0.66 14.17 5.96 1.30 4.89 44 E5_Aa NovelBoundary 0 25.93 5.85 4.82 4.76 34.38 41.68 44.74 21.40 12.99 15.69 12.00 29.26 0.00 32.08 28.56 31.70 8.32 9.29 0.00 17.07 2.90 3.12 7.60 45 ER5a ExonRegion 0 33.08 20.52 13.83 9.93 110.33 125.54 51.33 77.61 38.64 42.17 46.73 47.74 18.52 82.90 72.92 52.21 43.47 9.71 8.65 19.99 34.89 39.94 20.41 46 E5_Da KnownBoundary 0 76.38 59.79 33.62 20.61 281.83 192.11 140.48 85.39 44.68 38.25 31.06 119.59 52.59 84.11 26.95 49.13 38.80 8.79 0.00 17.51 13.78 24.55 12.04 47 ER5b ExonRegion 0 54.64 26.55 22.58 13.58 113.61 93.44 46.66 75.65 56.66 36.23 27.78 120.51 24.23 35.73 27.22 29.74 22.75 12.64 8.40 19.94 18.23 19.61 18.98