Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C17orf81 Gene 0 78.64 75.11 99.90 70.38 57.48 124.48 49.90 61.49 54.25 87.86 147.29 31.71 28.31 132.55 167.38 112.09 103.78 101.58 39.69 68.98 76.34 54.01 55.02 2 354429 Transcript 0 5.79 4.13 0.08 0.00 0.27 3.18 0.66 1.73 2.26 0.00 2.51 0.14 0.00 3.74 0.10 7.53 2.75 1.66 2.87 0.00 6.76 0.56 10.77 3 356683 Transcript 0 53.52 52.25 71.59 44.47 62.79 154.63 45.42 44.42 33.69 56.13 55.51 14.38 14.59 50.69 54.66 34.31 39.63 68.07 22.27 44.39 33.58 38.08 19.80 4 396627 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 396628 Transcript 0 19.29 19.26 25.97 17.82 11.85 32.14 15.17 9.54 10.63 34.55 41.83 3.31 6.38 30.29 33.15 19.64 38.98 29.52 5.12 36.89 32.83 10.23 18.58 6 ER1a ExonRegion 0 5.79 4.13 0.08 0.00 0.27 3.18 0.66 1.73 2.26 0.00 2.51 0.14 0.00 3.74 0.10 7.53 2.75 1.66 2.87 0.00 6.76 0.56 10.77 7 ER2a ExonRegion 1 40.11 31.98 16.09 15.93 32.84 96.14 31.87 7.40 7.03 20.96 44.04 2.08 0.00 35.30 47.30 45.20 43.53 34.41 20.37 30.23 30.48 10.48 42.64 8 E2_Da KnownBoundary 0 64.53 51.70 25.93 36.53 35.82 114.14 76.58 17.29 10.21 47.76 30.27 6.00 0.00 29.25 73.55 36.66 46.38 68.56 18.26 44.17 43.43 12.25 52.58 9 E2a_E2b KnownJunction 0 0.00 3.16 4.61 0.00 0.00 0.00 2.25 0.00 0.00 1.56 2.68 0.00 0.00 0.00 0.00 8.37 0.00 2.36 0.00 0.00 2.90 0.00 4.35 10 ER2b ExonRegion 0 19.29 19.26 25.97 17.82 11.85 32.14 15.17 9.54 10.63 34.55 41.83 3.31 6.38 30.29 33.15 19.64 38.98 29.52 5.12 36.89 32.83 10.23 18.58 11 E2_Ab KnownBoundary 1 22.00 12.43 25.96 22.27 3.23 2.90 10.91 15.32 14.38 50.66 92.13 11.70 18.67 68.81 56.37 30.68 90.14 20.52 13.84 71.01 52.39 16.84 26.12 12 ER2c ExonRegion 1 81.95 48.46 70.03 50.66 41.43 102.82 42.87 39.67 39.63 65.76 129.24 15.54 1.71 156.47 201.77 136.75 144.09 85.59 32.42 76.14 111.43 47.38 83.28 13 E2b_E3a KnownJunction 1 263.23 128.79 113.86 71.42 169.86 252.18 127.45 57.91 75.38 116.45 268.44 6.30 0.00 165.34 398.67 323.25 245.07 167.72 85.56 122.66 176.68 100.06 172.69 14 ER3a ExonRegion 1 106.49 96.48 131.05 78.65 107.69 231.06 86.45 69.42 70.04 121.87 237.08 29.17 16.30 168.96 258.35 232.75 197.40 172.57 66.84 107.08 150.61 65.03 144.43 15 E3a_E4a KnownJunction 1 68.75 114.65 158.66 95.89 93.38 244.86 96.41 101.90 77.66 142.82 261.54 30.61 5.68 152.39 217.94 169.27 192.61 168.59 73.79 88.78 169.15 40.66 106.28 16 ER4a ExonRegion 1 76.66 101.78 162.54 112.78 62.24 118.56 65.40 91.42 100.18 166.95 355.92 44.36 24.32 261.54 360.83 261.55 351.16 155.74 64.18 119.41 243.36 82.54 147.59 17 E4a_E5a KnownJunction 0 68.38 103.27 218.41 136.05 48.64 111.13 67.08 121.29 115.36 200.71 423.21 109.69 65.58 441.29 656.04 378.11 397.47 170.54 95.16 222.37 224.68 160.55 159.12 18 ER5a ExonRegion 0 86.70 108.04 216.87 124.05 84.38 192.77 80.91 115.02 106.65 181.34 349.41 81.97 48.85 288.82 439.47 288.54 263.34 220.32 78.41 151.92 174.96 98.29 146.02 19 E5_Da NovelBoundary 1 69.79 0.00 37.23 11.22 15.79 12.66 2.25 15.36 13.14 16.49 0.00 0.00 0.00 38.02 122.63 141.84 116.13 8.95 9.60 5.75 61.84 3.12 63.51 20 E5a_E6a KnownJunction 0 111.28 136.42 202.15 118.87 132.34 169.22 55.60 101.62 103.07 165.23 348.19 110.74 66.39 238.45 326.60 167.31 179.90 202.54 70.59 147.46 126.58 93.07 75.20 21 E5a_E7a NovelJunction 0 13.11 9.67 7.57 5.36 0.00 5.45 6.32 8.87 0.00 1.02 10.00 0.00 6.66 3.00 13.35 0.00 0.00 5.14 0.00 0.00 8.71 5.76 3.76 22 I5_AR1 ActiveIntronRegion 0 29.06 5.98 0.90 1.00 6.56 5.40 5.19 5.05 0.90 4.19 5.67 0.00 0.00 25.44 49.60 42.27 30.72 1.35 1.56 2.09 17.29 0.00 24.45 23 ER6a ExonRegion 0 121.18 122.56 187.93 143.45 71.69 126.71 55.60 115.15 107.29 169.76 329.16 73.10 60.43 269.76 315.57 181.35 172.55 183.57 68.91 130.70 133.22 100.01 79.92 24 E6a_E7a KnownJunction 0 336.50 151.03 173.91 128.82 65.87 147.02 82.58 109.13 113.34 175.03 352.67 42.76 66.07 280.95 358.74 165.26 174.19 147.33 75.30 149.76 152.34 97.12 87.67 25 ER7a ExonRegion 0 200.98 168.74 201.38 173.06 99.87 201.51 86.69 138.35 139.90 183.39 371.66 53.58 86.08 322.15 331.50 256.47 177.01 260.63 103.59 122.36 134.45 125.62 105.69 26 E7_Da KnownBoundary 0 38.01 35.19 63.60 49.41 16.47 120.84 37.71 30.48 33.82 40.91 38.01 11.70 21.10 61.51 36.59 39.56 26.93 67.57 30.68 42.95 39.23 25.04 8.37 27 E7a_E7b KnownJunction 0 165.96 124.45 117.56 81.91 50.93 128.39 57.68 78.53 82.52 103.02 277.39 80.88 128.89 284.60 262.19 146.97 109.12 97.79 52.05 78.43 65.61 81.62 60.61 28 E7a_E7c NovelJunction 0 0.00 0.00 0.00 3.93 0.00 2.44 10.16 4.89 4.11 4.41 5.05 0.00 6.82 4.94 15.70 0.00 0.00 3.98 0.00 2.88 8.22 3.12 0.00 29 ER7b ExonRegion 0 56.66 51.81 58.95 33.23 74.04 196.82 52.25 33.72 34.69 56.28 63.68 15.29 17.42 50.96 50.25 31.67 41.37 63.66 20.72 42.15 41.36 43.68 22.53 30 E7_Ab KnownBoundary 0 67.94 108.27 77.76 51.11 23.26 90.80 39.92 43.87 37.59 51.33 43.85 18.46 12.99 42.73 59.09 41.10 57.22 144.92 25.22 37.78 35.89 50.95 28.26 31 ER7c ExonRegion 0 110.97 159.64 174.54 137.42 124.05 227.78 102.98 149.60 130.21 184.33 338.68 99.84 109.51 318.77 344.15 230.58 180.10 179.29 99.92 114.45 140.84 145.87 93.47 32 E7_Db KnownBoundary 1 23.19 52.29 80.75 40.65 26.91 100.74 53.57 74.84 52.31 87.57 107.55 12.30 19.32 80.46 95.80 37.60 104.72 58.99 12.05 47.04 70.67 43.60 10.33 33 E7b_E7c KnownJunction 0 23.93 66.63 98.05 116.37 127.84 131.34 70.04 62.31 71.56 133.80 260.43 80.28 114.60 254.52 312.50 202.34 105.47 88.50 29.27 77.53 89.70 101.59 61.63 34 ER7d ExonRegion 0 50.38 52.70 84.23 55.71 51.54 112.43 38.58 55.11 32.69 55.99 47.34 13.48 11.77 50.41 59.07 36.94 37.89 72.47 23.82 46.63 25.79 32.47 17.07 35 E7_Ac KnownBoundary 0 29.41 39.80 4.41 15.42 16.72 76.32 23.01 6.86 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.15 0.00 2.75 0.00 0.00 0.00 36 ER7e ExonRegion 0 96.22 67.23 26.13 28.81 29.35 59.85 34.42 14.94 20.65 33.51 45.49 17.98 27.08 62.72 80.45 49.49 24.79 19.71 13.96 14.63 21.42 24.61 10.26