Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C17orf48 Gene 0 97.63 175.59 74.33 87.70 89.34 77.48 34.63 48.35 33.52 48.81 33.89 47.88 51.20 34.14 48.97 39.05 31.11 37.14 54.19 41.13 27.36 41.02 30.73 2 468843 Transcript 0 102.74 158.30 55.59 47.48 64.52 33.62 27.43 19.52 15.59 25.51 19.93 43.60 24.38 14.22 34.29 35.54 27.28 25.46 33.23 35.77 10.15 22.97 10.82 3 379774 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 401658 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 39.55 51.10 5.13 15.04 21.16 52.98 20.52 7.04 3.91 13.08 16.86 0.00 0.00 10.92 9.72 17.34 15.59 18.31 17.87 14.78 16.16 7.25 9.19 6 E1_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 4.20 1.68 0.00 0.00 2.63 0.00 0.00 0.00 0.00 3.76 0.00 0.00 0.00 2.88 0.00 2.76 15.62 7 E1a_E2a KnownJunction 0 151.51 194.11 22.18 34.36 66.55 118.97 57.50 23.41 15.34 44.30 54.12 5.25 0.00 19.95 8.90 62.21 46.10 59.86 89.23 33.30 42.69 21.80 34.66 8 E2_Ab NovelBoundary 1 291.38 396.51 45.15 56.80 147.79 159.28 48.27 45.88 32.06 68.39 50.64 0.00 15.10 20.90 43.64 121.59 36.56 84.23 144.76 77.02 49.48 39.01 69.40 9 ER2a ExonRegion 1 195.78 285.49 37.17 49.90 111.49 145.07 55.83 37.55 27.45 61.10 56.38 1.68 4.95 25.90 32.07 99.40 48.41 80.48 110.78 60.05 52.89 34.73 58.08 10 ER2b ExonRegion 0 103.54 185.52 75.48 87.75 93.02 91.95 35.66 52.82 41.80 56.87 37.00 55.64 70.94 31.00 49.15 42.66 33.07 32.44 50.24 48.66 24.44 45.99 25.04 11 E2_Da KnownBoundary 0 90.68 205.16 47.07 56.04 69.95 35.21 35.51 23.58 19.04 11.47 9.58 31.51 25.97 14.54 23.98 29.56 20.85 2.57 33.60 41.29 3.15 26.15 10.07 12 E2a_E3a KnownJunction 0 59.27 144.78 80.39 91.96 37.69 88.59 28.62 32.08 37.96 52.89 31.48 42.91 75.16 49.03 52.04 32.13 39.18 25.25 81.79 23.65 27.49 25.72 24.24 13 ER2c ExonRegion 1 95.10 169.32 41.58 52.52 71.82 30.67 28.54 17.60 15.33 25.77 14.32 49.99 28.14 15.96 29.14 30.33 19.96 18.88 27.40 33.58 8.86 29.95 18.49 14 E2b_E3a KnownJunction 0 110.39 147.28 69.60 42.45 57.22 36.57 26.32 21.44 15.86 25.25 25.53 37.21 20.62 12.48 39.43 40.76 34.60 32.04 39.06 37.97 11.43 15.98 3.16 15 ER3a ExonRegion 0 141.28 240.21 137.21 140.00 133.95 92.90 40.33 67.01 44.99 58.10 49.83 98.62 63.50 54.05 86.05 71.10 49.15 54.45 78.84 48.65 45.71 50.84 35.52 16 E3a_E4a KnownJunction 0 230.78 410.98 156.32 149.27 179.46 152.92 36.13 77.67 45.11 62.35 40.43 57.17 60.06 58.45 113.11 61.78 41.61 61.89 69.55 44.87 43.37 49.23 28.17 17 I3_AR1 ActiveIntronRegion 0 5.29 10.17 2.45 31.80 22.30 1.83 3.97 5.19 4.94 2.87 1.93 4.33 0.00 1.62 0.00 5.94 3.30 0.31 3.19 6.38 1.84 2.78 5.87 18 E4_Aa NovelBoundary 0 11.34 0.00 6.62 26.87 28.01 2.38 20.45 17.13 3.18 8.09 1.95 0.00 6.82 2.35 4.45 0.00 0.00 4.68 3.67 0.00 3.15 5.20 0.00 19 ER4a ExonRegion 0 80.38 155.80 72.80 92.04 83.24 62.15 33.88 49.27 26.16 43.58 30.30 29.62 32.22 40.73 48.53 26.53 26.80 43.97 61.47 32.15 30.96 38.17 42.44 20 ER4b ExonRegion 0 0.00 2.03 0.00 0.68 1.34 0.92 0.66 0.86 0.00 0.57 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 IG20 Intergenic 0 11.91 14.80 3.97 37.73 36.30 11.96 19.84 17.53 12.18 14.94 1.55 7.20 10.38 7.07 5.52 2.25 3.59 12.69 8.73 21.82 5.10 17.92 16.52 22 IG20_AR1 ActiveIntergenicRegion 0 9.43 16.14 2.81 39.00 38.43 8.73 23.98 15.73 11.38 16.76 1.01 5.74 10.95 6.38 4.55 1.55 1.72 8.84 7.12 19.86 6.65 24.51 19.03 23 IG20_SR1 SilentIntergenicRegion 0 13.97 13.72 4.94 36.73 34.60 14.65 16.44 19.05 12.86 13.47 2.00 8.42 9.93 7.65 6.33 2.83 5.14 15.88 10.08 23.48 3.84 12.51 14.47