Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	FAM57A	Gene	0	20.88	58.17	73.36	38.31	43.86	58.09	23.08	43.76	37.51	79.92	86.77	31.50	32.62	126.76	109.55	45.26	75.98	92.02	32.09	69.84	119.36	70.68	81.81
2	308278	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	301324	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.34	0.00	1.67	2.63	0.00	0.00	9.83	0.00	6.75	0.00	0.00	0.00	6.52	5.56	5.63	4.35
4	451373	Transcript	0	0.15	2.65	4.21	1.79	0.54	2.43	0.27	5.27	2.77	5.38	3.82	0.08	0.63	5.31	4.28	1.33	3.40	15.54	0.42	4.54	9.18	3.88	2.14
5	IG7	Intergenic	0	4.31	22.99	15.86	18.89	19.64	22.57	2.35	19.19	16.86	17.09	1.92	4.83	4.50	5.60	5.41	2.88	2.62	10.65	6.08	15.79	2.60	3.46	4.08
6	IG7_AR1	ActiveIntergenicRegion	0	5.28	45.79	17.34	27.83	32.72	31.84	4.23	15.24	15.33	13.04	6.02	6.80	3.44	10.03	10.52	6.02	3.60	8.44	4.46	13.58	0.86	1.63	1.83
7	IG7_SR2	SilentIntergenicRegion	0	7.94	28.08	25.53	35.50	22.67	34.42	2.33	23.55	27.14	25.16	0.80	5.68	6.13	8.27	4.80	3.12	3.47	15.02	7.57	20.55	2.83	4.92	6.31
8	IG7_AR2	ActiveIntergenicRegion	0	3.57	37.15	20.35	29.63	31.22	40.39	0.89	17.57	23.90	24.67	1.08	8.49	3.10	11.41	6.83	3.18	3.98	14.62	13.27	23.15	3.52	9.04	6.71
9	IG7_SR3	SilentIntergenicRegion	0	3.58	18.97	11.44	14.23	17.43	18.28	2.04	18.56	13.98	14.60	1.42	5.53	5.75	4.02	4.42	2.52	2.28	7.24	4.73	12.68	3.22	3.55	4.20
10	IG7_AR3	ActiveIntergenicRegion	0	5.91	34.03	29.82	21.99	34.17	33.28	3.79	43.64	24.91	30.94	2.82	4.45	4.75	8.54	7.58	2.53	5.37	23.54	16.04	28.46	3.27	4.64	4.64
11	IG7_SR4	SilentIntergenicRegion	0	5.67	34.59	26.69	21.57	29.09	23.58	4.59	30.94	25.67	28.04	3.23	5.84	4.56	5.24	8.23	2.49	3.49	16.93	9.22	32.93	3.09	5.35	6.15
12	ER1a	ExonRegion	0	1.87	2.69	4.25	4.44	2.06	4.99	0.69	4.55	4.70	8.60	24.27	4.26	0.99	28.98	25.46	9.33	17.63	14.64	9.88	10.58	28.19	9.46	20.19
13	E1_Ab	NovelBoundary	0	2.89	3.35	8.01	5.83	0.00	2.56	1.68	10.23	5.09	13.89	30.06	6.30	6.33	40.26	37.09	14.27	24.78	31.71	0.00	14.45	33.61	9.00	17.67
14	E1a_E2b	KnownJunction	1	3.26	6.05	17.62	12.05	0.00	4.32	3.97	13.39	12.01	21.33	74.49	18.01	0.00	105.60	115.33	33.92	40.30	62.18	8.75	29.27	42.94	40.41	31.33
15	ER1b	ExonRegion	1	2.44	4.07	12.91	7.86	1.03	1.83	2.75	10.64	10.74	18.88	64.53	16.32	3.25	91.58	88.60	26.06	30.47	42.36	8.33	20.95	48.48	28.05	21.23
16	ER1c	ExonRegion	0	0.42	2.57	2.45	0.26	1.58	5.42	0.78	2.03	2.58	5.02	2.85	0.00	1.41	8.08	5.85	1.76	2.23	7.80	1.16	2.11	15.37	1.11	5.19
17	E1b_E2a	KnownJunction	0	0.00	3.22	9.17	2.06	0.00	0.00	0.00	8.63	3.41	4.35	2.63	0.00	0.00	0.00	0.00	0.00	4.68	23.55	0.00	0.00	2.59	6.00	0.00
18	ER2a	ExonRegion	0	0.03	2.15	1.01	3.04	0.04	1.86	0.04	5.16	2.31	6.78	5.97	0.25	0.48	7.86	6.98	2.24	3.30	15.29	0.09	11.50	9.58	4.53	1.23
19	E2_Ab	KnownBoundary	0	0.00	6.51	8.81	3.40	0.00	5.11	0.00	4.85	2.66	20.09	14.90	0.00	0.00	18.25	4.70	7.60	8.32	23.01	0.00	2.49	21.00	5.63	30.30
20	ER2b	ExonRegion	1	2.09	12.67	25.70	16.06	2.16	14.47	3.57	11.56	15.65	32.04	67.58	6.21	13.84	87.88	82.88	16.69	56.63	45.17	7.91	25.69	90.01	43.20	45.36
21	E2a_E3a	KnownJunction	0	3.33	9.08	40.54	23.51	8.66	29.53	6.18	18.81	16.72	40.00	53.65	12.45	13.47	49.97	76.64	16.24	37.49	49.50	18.64	19.94	110.64	41.64	49.00
22	I2	Intron	0	4.34	24.87	14.84	11.80	19.35	14.38	5.30	14.34	8.79	16.81	2.47	6.30	3.94	2.62	5.20	3.50	4.36	15.37	5.05	17.51	3.00	2.29	4.30
23	I2_SR1	SilentIntronRegion	0	4.35	24.89	14.85	11.81	19.37	14.39	5.30	14.35	8.80	16.82	2.48	6.31	3.94	2.62	5.20	3.51	4.36	15.38	5.05	17.52	3.00	2.29	4.30
24	E3_Aa	NovelBoundary	0	6.15	55.38	47.25	15.32	34.47	27.77	12.32	25.88	14.12	46.58	4.63	5.40	6.82	4.65	9.39	7.78	4.21	17.53	10.82	25.69	0.00	10.96	0.00
25	ER3a	ExonRegion	0	18.93	35.85	82.73	37.30	25.64	43.98	14.77	44.83	34.35	87.44	125.53	44.58	39.05	173.98	138.37	47.45	101.05	101.59	37.17	57.67	166.36	83.67	93.67
26	E3_Da	NovelBoundary	0	0.00	23.94	43.70	11.82	0.00	15.96	2.03	19.02	12.47	30.11	9.63	0.00	6.82	21.60	39.06	11.79	14.03	55.17	8.94	17.51	7.85	10.96	4.35
27	E3a_E4a	KnownJunction	1	17.56	34.01	74.63	39.16	21.39	35.38	9.85	40.79	26.33	76.18	136.19	18.16	86.52	204.84	117.68	28.97	115.29	100.77	23.72	45.70	182.80	75.62	83.91
28	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.34	0.00	1.67	2.63	0.00	0.00	9.83	0.00	6.75	0.00	0.00	0.00	6.52	5.56	5.63	4.35
29	I3	Intron	0	6.44	23.63	28.26	14.94	28.25	27.45	7.73	17.12	10.93	21.86	7.55	13.13	9.80	15.17	11.55	6.94	9.88	28.67	11.15	27.96	7.38	7.19	10.58
30	I3_SR1	SilentIntronRegion	0	6.47	23.73	28.37	14.99	28.36	27.53	7.75	17.19	10.97	21.94	7.58	13.17	9.84	15.22	11.60	6.97	9.92	28.78	11.20	28.07	7.40	7.22	10.61
31	E4_Aa	NovelBoundary	1	22.82	25.32	47.66	40.39	45.33	51.79	14.00	33.85	18.87	54.50	16.27	46.52	20.29	20.19	5.19	3.85	8.32	84.73	0.00	60.47	8.53	0.00	11.87
32	ER4a	ExonRegion	0	21.54	43.53	86.75	42.73	57.86	64.79	19.16	44.13	40.63	109.57	181.99	68.10	65.37	206.57	161.17	75.57	114.50	133.21	42.97	76.26	217.41	87.51	100.82
33	E4_Da	NovelBoundary	1	78.75	143.40	87.81	62.43	101.61	91.48	21.86	81.53	31.68	93.35	12.00	38.41	39.12	47.09	11.50	23.84	20.48	111.55	21.37	137.49	10.69	8.88	10.59
34	E4a_E5a	KnownJunction	0	9.48	24.86	66.70	45.42	24.28	41.68	13.96	32.69	41.41	125.10	198.73	93.63	59.25	158.81	157.49	82.12	130.25	141.44	26.07	46.02	207.08	97.54	121.90
35	I4	Intron	0	18.32	52.60	42.85	30.08	61.11	38.06	12.98	41.12	20.54	48.66	6.25	11.79	13.06	13.72	8.92	10.85	9.64	54.63	16.94	61.47	4.83	12.60	15.62
36	I4_SR1	SilentIntronRegion	0	15.57	60.68	47.16	35.98	67.27	42.57	16.36	47.18	22.33	55.09	8.57	15.86	18.85	15.54	9.67	11.99	9.64	58.32	21.34	71.80	4.99	14.09	16.15
37	I4_AR1	ActiveIntronRegion	0	21.68	43.22	37.91	23.21	54.07	32.87	9.02	34.10	18.50	41.23	3.52	7.01	6.25	11.62	8.07	9.54	9.68	50.49	11.80	49.46	4.65	10.89	15.07
38	E5_Aa	NovelBoundary	0	22.45	40.85	47.51	15.65	42.44	10.39	22.43	26.29	18.23	39.03	7.00	0.00	13.47	15.36	4.45	12.48	16.74	72.05	7.81	46.60	5.44	7.78	20.15
39	ER5a	ExonRegion	0	22.78	75.20	126.34	55.83	63.75	85.50	33.04	58.04	57.24	124.56	151.45	52.24	70.82	218.96	163.44	89.45	137.83	202.62	54.71	111.36	208.74	130.74	155.56
40	E5_Da	KnownBoundary	0	41.04	57.42	175.57	70.12	66.64	85.52	68.05	66.33	75.14	100.76	149.35	49.37	48.21	210.90	123.62	147.31	131.46	161.30	62.59	100.29	224.99	105.20	193.69
41	ER5b	ExonRegion	0	30.49	85.94	92.65	51.22	62.27	79.65	33.42	59.81	49.52	101.27	92.47	36.46	35.61	142.57	131.57	52.16	85.83	100.96	39.05	92.22	129.63	84.24	95.53
42	IG8	Intergenic	0	10.54	29.60	17.84	14.59	32.80	19.67	9.26	15.79	8.29	25.46	3.98	10.04	4.08	9.74	5.97	6.69	6.01	33.26	11.90	38.62	1.58	5.89	7.73
43	IG8_AR1	ActiveIntergenicRegion	0	14.30	37.22	20.03	18.20	47.48	29.45	12.10	21.89	12.61	30.81	5.43	13.31	5.61	11.86	9.41	9.07	6.83	35.09	11.34	44.69	1.65	8.21	6.80
44	IG8_SR1	SilentIntergenicRegion	0	5.76	20.11	15.91	11.83	17.19	9.69	6.06	9.69	4.02	21.04	2.63	6.41	2.16	8.14	2.52	3.27	4.90	29.94	10.84	33.51	1.63	3.38	8.59
45	IG8_AR2	ActiveIntergenicRegion	0	12.04	31.76	13.63	4.66	19.37	7.98	7.81	7.79	2.21	12.84	1.39	7.99	4.49	3.77	1.47	10.09	6.79	41.07	23.19	25.20	0.84	3.99	9.72