Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C17orf87 Gene 0 79.06 12.38 6.19 13.41 51.53 17.59 21.51 15.54 19.54 8.42 510.26 126.76 88.39 236.85 136.37 300.27 24.68 7.08 8.80 11.82 5.57 3.57 10.84 2 399594 Transcript 0 30.35 13.19 3.81 4.76 15.45 6.38 13.81 5.46 4.92 5.89 81.88 31.79 10.29 51.13 45.75 70.46 25.79 5.96 17.77 14.79 3.59 7.25 14.99 3 399600 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 399592 Transcript 0 19.22 20.27 1.91 2.10 11.94 8.29 15.66 1.80 2.56 2.26 6.82 5.53 10.50 6.02 19.64 20.48 16.46 6.72 21.78 13.57 7.14 9.42 22.14 5 315768 Transcript 0 42.12 4.49 3.16 7.47 27.32 7.78 9.64 7.73 10.20 4.64 249.29 45.29 37.54 110.35 67.92 133.87 11.71 4.06 2.36 5.86 2.89 1.00 4.31 6 ER1a ExonRegion 1 30.69 0.00 1.23 3.41 10.70 9.17 0.66 0.00 0.00 0.00 83.11 0.00 0.00 13.81 40.62 44.58 3.30 1.85 0.00 0.00 0.00 0.00 5.87 7 ER1b ExonRegion 1 104.33 2.94 21.06 17.15 55.56 46.45 33.76 13.65 17.64 6.58 471.79 16.42 18.01 159.01 132.25 415.26 11.05 1.74 9.20 3.07 2.12 2.00 8.37 8 E1_Da NovelBoundary 0 9.78 12.50 43.35 56.30 39.13 44.63 7.82 45.22 22.08 34.11 11.95 19.81 13.64 5.18 0.00 48.11 0.00 57.58 11.58 48.51 14.09 2.88 14.77 9 E1a_E2b KnownJunction 1 44.23 0.00 0.00 1.47 7.81 8.52 6.32 6.16 6.22 0.00 236.53 72.62 52.76 60.57 40.18 215.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 Ix Intron 0 7.36 12.96 21.17 14.12 10.86 10.63 4.99 8.21 11.73 13.37 5.04 9.59 7.83 4.93 8.06 15.49 4.78 19.42 11.08 14.80 9.58 2.41 11.06 11 Ix_SR1 SilentIntronRegion 0 7.40 13.03 21.29 14.21 10.92 10.69 5.02 8.26 11.80 13.45 5.07 9.65 7.88 4.94 8.11 15.57 4.81 19.53 11.12 14.88 9.63 2.43 11.13 12 Ix Intron 0 26.88 20.21 24.28 29.16 36.29 26.76 12.28 14.76 12.10 14.83 13.09 11.81 13.49 11.38 16.35 33.87 7.05 23.91 13.40 16.45 12.22 5.93 15.66 13 Ix_SR1 SilentIntronRegion 0 27.36 20.45 24.74 29.71 36.98 27.23 12.49 15.04 12.33 15.11 13.31 12.03 13.60 11.57 16.41 34.45 7.19 24.36 13.66 16.73 12.45 6.05 15.91 14 E2_Ab NovelBoundary 0 17.56 15.13 36.19 64.09 71.99 33.50 8.39 26.66 22.19 27.43 4.63 11.55 28.24 10.65 29.30 33.07 8.32 27.82 9.60 12.78 13.96 6.25 34.66 15 ER2a ExonRegion 0 1.64 0.00 0.00 0.19 0.36 0.33 0.18 0.24 0.22 0.00 12.39 1.77 2.56 2.36 1.58 8.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER2b ExonRegion 0 10.79 0.79 0.00 2.46 5.16 2.89 4.35 7.93 7.22 1.31 474.88 74.23 48.39 137.44 79.91 204.30 8.40 0.00 0.00 0.00 0.00 0.00 0.00 17 E2_Da NovelBoundary 0 46.60 40.85 106.53 90.53 64.09 18.91 18.37 49.49 29.43 50.90 4.42 24.01 13.31 9.01 5.81 31.02 8.23 16.42 12.52 23.91 15.88 15.74 9.90 18 E2a_E3a KnownJunction 1 12.37 0.00 0.00 3.36 0.00 2.56 0.00 14.75 13.11 2.98 510.23 75.32 60.71 266.17 227.70 665.72 12.81 0.00 0.00 0.00 0.00 0.00 0.00 19 Ix Intron 0 26.27 1.95 1.29 3.38 11.81 2.93 4.15 2.31 1.18 1.53 17.32 8.34 7.64 10.68 11.50 20.15 2.75 0.18 1.43 0.82 1.41 0.27 0.75 20 Ix_SR1 SilentIntronRegion 0 27.18 2.25 1.40 3.62 12.53 2.73 4.01 2.44 1.25 1.46 18.02 6.71 8.49 11.39 11.24 20.53 3.21 0.22 1.51 0.76 1.74 0.33 0.93 21 Ix_AR1 ActiveIntronRegion 0 19.95 0.73 0.81 2.38 7.77 3.86 4.47 1.84 0.81 1.74 13.41 15.38 3.84 7.12 11.56 18.81 0.65 0.00 1.14 1.01 0.00 0.00 0.00 22 E3_Aa NovelBoundary 0 304.42 3.29 0.00 5.79 96.52 2.90 21.82 2.26 6.77 1.26 59.86 18.91 45.61 29.37 45.12 108.18 8.23 0.00 0.00 3.26 0.00 0.00 0.00 23 ER3a ExonRegion 0 30.72 0.10 0.00 4.24 22.79 5.07 4.24 14.45 16.54 1.99 775.85 146.93 104.43 297.42 193.89 605.20 29.45 0.00 0.00 1.70 0.00 0.00 0.00 24 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E3a_E6a KnownJunction 1 45.42 0.00 0.00 6.86 51.70 20.16 11.35 18.77 20.54 2.20 671.54 216.22 98.21 390.90 231.29 662.22 17.77 0.00 0.00 0.00 0.00 0.00 0.00 26 E4_Aa NovelBoundary 0 60.90 2.70 3.84 4.13 7.72 0.00 13.07 2.34 6.66 3.33 2.42 6.15 6.49 0.00 10.01 21.02 4.30 2.57 17.13 5.82 3.09 0.00 7.34 27 ER4a ExonRegion 0 10.21 0.00 0.00 2.67 1.84 0.00 0.00 0.00 0.00 1.12 3.94 4.86 5.26 4.32 7.49 6.15 0.04 0.00 0.00 0.06 0.00 0.00 0.00 28 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E5_Aa NovelBoundary 0 936.09 863.27 384.11 502.80 830.14 763.99 1337.87 506.81 412.61 379.88 216.84 180.66 254.37 172.17 208.67 721.78 584.29 455.32 539.87 728.53 460.92 307.33 576.80 30 ER5a ExonRegion 1 66.67 81.08 7.65 5.74 45.90 33.18 62.62 7.18 10.24 7.92 23.34 17.28 36.75 19.74 71.05 75.79 65.78 26.88 87.13 54.24 28.57 37.67 88.58 31 E5_Da NovelBoundary 1 10917.56 6941.53 2750.20 3002.22 6643.55 5536.02 7134.04 3453.42 3150.29 2916.38 2720.85 888.59 1005.45 765.97 1658.08 7038.15 4799.06 4477.88 6019.84 5792.62 3259.00 2940.74 6280.16 32 E6_Aa NovelBoundary 0 10.15 0.00 1.83 3.26 0.00 0.00 17.31 4.81 0.00 1.13 0.00 0.00 6.98 4.59 4.70 25.04 4.58 2.36 3.86 3.13 0.00 0.00 0.00 33 ER6a ExonRegion 0 51.57 0.03 0.15 9.71 47.48 43.27 23.01 14.53 18.59 4.67 754.30 176.28 95.13 394.16 159.92 416.74 31.98 0.02 0.00 0.03 0.00 0.00 0.00 34 E6a_E7a KnownJunction 1 24.67 0.00 0.00 1.73 4.33 0.00 0.00 2.18 1.79 0.00 110.40 31.51 6.17 70.34 49.32 80.32 25.90 0.00 0.00 0.00 0.00 0.00 0.00 35 E6a_E8a KnownJunction 0 118.47 0.00 1.18 8.12 114.35 115.05 95.17 8.46 26.01 2.74 1184.62 283.29 174.50 459.42 205.70 366.74 40.02 0.00 0.00 0.00 0.00 0.00 0.00 36 E7_Aa NovelBoundary 1 536.39 483.73 240.47 321.30 512.90 386.54 635.10 421.34 284.34 285.65 117.98 141.80 232.61 86.82 95.68 338.71 219.64 290.22 246.69 302.01 205.41 88.91 318.15 37 ER7a ExonRegion 0 36.04 26.38 7.62 7.79 26.56 12.75 27.61 8.74 8.05 11.77 53.37 32.08 14.41 31.92 42.17 60.60 25.69 11.93 35.53 29.57 7.17 14.51 29.98 38 E7_Da NovelBoundary 0 633.52 492.94 523.43 449.33 455.52 361.95 517.50 548.95 391.58 418.54 206.79 46.67 111.84 116.31 190.37 417.50 461.52 554.69 339.30 421.60 316.36 132.45 478.72 39 Ix Intron 0 28.70 4.55 2.73 8.97 26.63 5.14 6.18 2.88 4.81 3.93 73.45 16.39 26.24 53.85 45.48 97.23 4.52 2.91 2.58 5.82 1.51 0.65 5.66 40 Ix_SR1 SilentIntronRegion 0 28.73 4.56 2.73 8.98 26.66 5.14 6.18 2.89 4.81 3.94 73.54 16.41 26.27 53.91 45.53 97.35 4.52 2.92 2.58 5.83 1.51 0.65 5.67 41 E8_Aa NovelBoundary 0 305.91 29.01 5.38 19.91 56.96 4.49 20.49 14.09 5.53 6.58 126.45 87.33 100.16 95.24 134.99 172.09 9.35 9.74 8.75 11.70 5.93 0.00 7.60 42 ER8a ExonRegion 0 113.29 14.56 6.38 17.89 72.89 20.49 25.60 24.58 29.17 10.14 805.75 314.81 190.78 421.87 200.93 503.71 28.73 5.03 4.17 9.21 4.41 1.28 4.81 43 E8_Da KnownBoundary 0 157.21 20.39 5.77 20.68 69.69 20.39 31.00 19.39 33.42 10.72 830.95 139.25 166.71 604.86 343.04 771.85 49.65 8.87 0.00 8.05 5.56 3.12 4.35 44 ER8b ExonRegion 0 82.61 8.97 6.33 14.75 54.28 15.23 19.09 15.22 20.18 9.29 486.20 88.82 72.51 218.33 134.27 258.96 23.42 8.13 4.71 11.73 5.78 2.01 8.63