Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SAT2 Gene 0 135.23 142.36 205.65 149.94 112.72 18.76 32.62 108.14 78.59 76.38 78.90 47.46 35.39 98.91 136.11 86.41 87.88 91.16 90.96 106.74 194.71 200.67 236.99 2 380466 Transcript 0 44.71 17.92 5.41 5.28 7.80 2.45 6.37 4.57 2.32 4.28 11.96 0.00 2.35 8.15 12.69 7.00 7.01 6.24 8.30 5.90 14.51 11.46 19.82 3 269298 Transcript 0 24.75 42.10 71.67 23.51 24.53 2.90 0.00 28.51 35.01 22.54 20.32 0.00 0.00 33.43 13.35 61.78 18.14 25.00 35.11 41.74 40.28 75.75 101.50 4 380460 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 38.63 16.01 2.86 4.77 10.93 3.97 11.75 7.85 1.85 5.97 22.47 0.00 4.69 9.00 10.15 6.56 11.55 6.47 3.85 3.28 18.55 9.90 24.96 6 ER1b ExonRegion 1 158.61 79.99 21.83 13.09 67.06 22.62 46.42 19.59 11.49 19.60 55.12 3.02 2.56 41.14 57.06 53.23 63.32 35.44 20.75 15.09 77.73 58.53 98.42 7 E1_Ac KnownBoundary 0 276.72 148.20 53.37 34.26 123.77 47.59 63.29 42.84 26.42 35.27 37.69 6.30 7.30 67.10 78.00 87.84 80.32 63.92 30.59 23.07 93.59 87.01 155.87 8 ER1c ExonRegion 1 87.00 106.81 117.25 66.01 50.71 17.15 23.35 52.20 50.00 54.42 49.98 9.73 14.05 58.03 75.80 61.83 62.32 61.58 60.33 62.92 154.69 127.49 233.03 9 E1_Da NovelBoundary 0 12.22 20.19 120.78 92.00 62.22 2.78 4.28 60.13 52.72 45.13 29.80 0.00 6.49 32.61 68.11 53.49 20.48 70.89 85.27 40.65 117.93 133.12 343.59 10 E1a_E2a KnownJunction 1 24.75 42.10 71.67 23.51 24.53 2.90 0.00 28.51 35.01 22.54 20.32 0.00 0.00 33.43 13.35 61.78 18.14 25.00 35.11 41.74 40.28 75.75 101.50 11 E1b_E2a KnownJunction 0 55.71 34.66 124.95 97.62 65.53 2.90 24.02 69.37 57.20 26.65 39.69 32.11 6.82 53.74 84.18 41.10 36.56 68.15 43.39 37.46 134.61 81.44 159.12 12 ER1d ExonRegion 0 31.37 30.86 127.94 96.04 64.06 2.16 15.26 81.95 48.68 34.34 40.14 16.81 8.28 49.87 77.14 53.85 39.61 76.08 59.96 40.05 140.78 108.22 265.51 13 E2_Aa NovelBoundary 0 83.94 41.05 43.38 63.56 54.58 0.00 20.36 37.38 18.55 13.75 32.32 6.30 6.82 38.97 25.09 46.65 17.39 6.92 14.97 27.36 53.31 31.60 61.55 14 ER2a ExonRegion 0 95.57 123.31 219.29 133.14 145.42 31.63 47.79 98.69 78.38 67.23 83.67 29.14 25.52 95.85 119.62 77.96 76.24 91.82 74.12 96.77 212.40 157.91 237.53 15 E2_Da NovelBoundary 0 69.72 37.49 55.35 55.04 26.49 8.63 9.98 29.16 30.44 24.04 11.27 0.00 0.00 9.65 14.09 34.61 30.48 31.01 18.17 23.59 44.97 33.19 76.23 16 E2a_E3a KnownJunction 1 82.90 167.27 255.61 143.17 200.51 58.21 92.70 95.99 77.75 90.87 93.18 41.86 52.76 117.43 73.92 53.32 117.62 75.15 82.07 87.18 212.45 159.94 200.60 17 I2 Intron 0 17.46 22.88 29.44 36.56 22.07 0.69 7.94 36.70 16.57 6.41 9.42 4.30 1.45 13.51 18.30 17.83 8.66 14.13 13.14 15.96 35.53 33.60 40.75 18 I2_AR1 ActiveIntronRegion 0 17.71 23.19 29.88 37.09 22.38 0.70 8.06 37.25 16.81 6.50 9.56 4.36 1.44 13.71 18.58 18.10 8.79 14.34 13.34 16.20 36.03 34.08 41.35 19 E3_Aa NovelBoundary 0 92.53 63.48 83.53 93.99 52.21 0.00 11.84 43.54 39.81 26.84 21.53 13.05 0.00 29.37 27.69 15.12 13.65 32.13 4.61 36.62 49.79 44.82 97.06 20 ER3a ExonRegion 0 117.32 202.22 228.02 152.79 165.74 41.63 66.26 123.32 87.60 94.24 95.66 58.60 47.91 126.33 145.44 103.92 109.01 96.81 99.20 113.30 258.15 239.41 277.55 21 E3_Da NovelBoundary 0 85.50 58.28 80.84 84.27 40.15 5.51 8.13 54.63 50.69 22.11 24.43 0.00 6.82 16.95 10.63 25.12 25.71 15.46 4.80 2.88 52.57 42.56 35.77 22 E3a_E4a KnownJunction 0 132.99 191.94 203.42 218.15 155.60 18.34 31.75 141.99 58.27 54.02 83.13 43.06 49.02 99.24 136.23 84.93 76.02 123.03 99.86 95.75 208.93 243.46 242.52 23 E3a_E5a NovelJunction 0 20.60 60.38 107.21 55.47 31.49 19.70 21.20 56.31 59.32 42.25 31.69 0.00 6.82 22.07 29.92 73.31 39.36 14.88 13.93 23.78 43.92 44.21 86.90 24 I3 Intron 1 36.35 11.64 10.45 15.85 8.35 0.00 7.58 13.40 3.83 0.89 6.04 3.71 6.03 8.40 6.39 20.11 0.00 8.13 4.97 8.86 9.17 23.85 33.62 25 I3_AR1 ActiveIntronRegion 1 37.06 11.86 10.67 16.16 8.53 0.00 7.74 13.68 3.91 0.91 6.16 3.79 6.16 8.58 6.53 20.53 0.00 8.30 5.08 9.04 9.37 24.33 34.32 26 E4_Aa NovelBoundary 0 84.90 70.51 60.26 65.29 61.46 0.00 5.70 40.38 60.59 27.96 11.63 12.00 7.63 21.78 29.30 32.13 28.89 14.96 7.72 20.52 62.77 38.33 69.31 27 ER4a ExonRegion 0 272.03 227.36 233.88 193.38 212.62 18.66 37.32 130.26 65.12 85.76 117.79 62.95 71.41 168.46 184.09 116.73 99.29 145.75 164.73 131.98 226.72 284.20 340.48 28 E4_Da NovelBoundary 0 156.47 80.18 62.62 101.32 63.84 8.46 20.93 39.35 39.24 25.68 21.69 6.30 6.82 25.13 45.00 19.31 12.53 14.67 11.77 15.02 51.71 66.62 80.84 29 E4a_E5a KnownJunction 0 238.78 108.34 239.05 133.52 175.81 18.51 17.09 110.65 38.51 65.09 105.55 50.42 26.13 173.88 194.57 108.86 61.52 113.79 149.93 117.86 210.23 270.16 295.10 30 I4 Intron 1 97.08 81.44 41.25 51.43 45.79 3.14 18.58 26.45 17.64 12.28 19.85 13.69 2.64 23.68 27.86 14.24 13.56 10.68 11.99 21.86 24.12 41.36 53.29 31 I4_AR1 ActiveIntronRegion 1 98.40 82.49 41.80 52.12 46.42 3.18 18.83 26.80 17.88 12.45 20.10 13.87 2.68 23.99 28.24 14.44 13.74 10.82 12.16 22.14 24.45 41.90 53.98 32 E5_Aa NovelBoundary 1 102.54 81.24 81.40 104.65 69.44 21.86 28.84 62.31 24.07 28.98 46.49 12.60 19.97 46.09 86.16 59.73 9.35 19.32 9.04 33.49 54.98 82.30 149.39 33 ER5a ExonRegion 0 210.83 185.15 353.12 230.56 185.80 11.76 28.00 154.00 94.53 94.19 142.94 73.71 40.27 171.29 222.62 128.45 116.01 148.23 124.85 152.15 273.80 295.91 331.12 34 E5_Da NovelBoundary 0 78.53 34.07 59.96 79.11 32.51 0.00 13.12 21.40 19.79 17.19 10.06 18.46 0.00 16.72 4.45 11.54 4.77 21.93 18.17 18.28 24.03 41.70 81.18 35 E5a_E6a KnownJunction 0 275.01 304.49 428.64 337.75 264.43 20.56 52.95 172.39 148.12 112.61 174.78 116.89 64.61 143.45 296.68 154.32 163.07 153.71 116.24 206.26 347.07 345.91 398.73 36 I5 Intron 0 55.55 38.34 21.59 35.28 35.60 2.05 7.34 9.52 11.56 10.74 12.14 6.59 1.73 9.46 17.41 9.89 12.20 18.32 8.24 8.65 26.88 38.48 39.01 37 I5_AR1 ActiveIntronRegion 0 56.37 38.91 21.89 35.76 36.10 2.08 7.44 9.66 11.72 10.89 12.32 6.69 1.76 9.60 17.66 10.03 12.35 18.55 8.36 8.76 27.27 39.04 39.58 38 E6_Aa NovelBoundary 0 81.20 32.17 57.95 71.22 4.16 0.00 6.05 40.05 23.41 24.36 6.58 0.00 0.00 29.14 39.31 11.62 7.95 15.13 8.66 14.57 30.58 66.62 77.85 39 ER6a ExonRegion 0 140.23 146.74 266.70 210.37 115.21 15.26 29.48 147.60 109.87 95.48 83.91 73.57 43.88 106.84 171.67 97.05 105.21 99.75 101.46 141.79 212.51 242.89 218.89 40 ER6b ExonRegion 0 50.80 19.83 7.96 5.79 4.68 0.92 0.99 1.30 2.78 2.58 1.45 0.00 0.00 7.31 15.23 7.43 2.48 6.01 12.74 8.51 10.47 13.02 14.68