Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC25A35 Gene 0 18.87 2.78 14.22 6.80 9.73 8.98 6.10 13.91 7.59 7.57 12.82 5.38 3.66 15.76 24.14 17.45 14.26 12.87 4.94 8.90 17.56 7.45 10.37 2 396278 Transcript 0 48.44 0.00 2.07 2.36 11.42 2.57 5.49 17.08 5.52 4.52 3.67 6.98 3.03 12.46 23.35 15.18 15.35 7.81 5.46 9.48 20.36 2.79 2.44 3 312524 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 380067 Transcript 0 14.59 4.56 22.92 8.17 6.91 14.37 6.10 14.01 8.96 8.16 16.68 2.15 1.63 13.97 20.98 13.61 16.73 13.30 3.80 9.30 13.84 8.41 9.59 5 ER1a ExonRegion 0 18.83 0.21 7.11 3.71 11.65 7.07 8.05 12.46 10.10 7.40 15.54 7.73 9.42 15.03 28.81 29.87 18.98 12.80 5.46 8.67 24.86 5.98 17.29 6 E1_Ab KnownBoundary 0 34.01 0.00 10.76 3.10 0.00 2.16 5.92 10.60 13.83 10.15 12.63 12.60 0.00 32.49 32.88 25.89 38.24 28.56 11.01 8.18 34.35 3.12 17.16 7 ER1b ExonRegion 0 10.78 0.00 5.97 1.33 7.45 4.63 4.84 10.93 6.67 5.25 8.19 10.92 4.42 21.92 25.04 15.24 13.33 11.10 3.03 3.90 22.94 5.70 8.13 8 E1a_E2a KnownJunction 0 27.56 0.00 8.60 0.00 3.31 0.00 2.08 12.69 3.30 3.36 6.90 6.30 0.00 24.90 36.84 23.58 13.37 10.53 8.38 6.26 23.91 6.12 22.88 9 ER2a ExonRegion 0 23.54 0.00 5.51 2.21 5.39 3.56 4.59 12.26 4.30 4.85 6.91 1.18 0.00 15.01 20.53 22.07 12.00 3.98 6.13 7.09 23.64 2.97 10.81 10 E2a_E3a KnownJunction 0 30.38 0.00 2.60 4.79 7.39 5.22 11.61 8.87 3.91 4.32 9.48 0.00 0.00 14.36 24.85 3.16 12.06 1.91 9.51 9.78 11.74 0.00 10.24 11 E2a_E4a NovelJunction 0 6.15 0.00 1.27 0.00 3.31 0.00 0.00 0.00 0.00 1.13 0.00 0.00 0.00 2.12 0.00 0.00 0.00 1.82 0.00 0.00 13.47 0.00 11.52 12 E3_Aa NovelBoundary 0 20.74 0.00 0.00 3.53 7.47 0.00 4.11 6.78 0.00 4.46 2.21 0.00 0.00 4.77 0.00 10.17 0.00 2.49 0.00 0.00 21.31 0.00 0.00 13 ER3a ExonRegion 0 18.48 0.00 1.67 3.54 7.26 3.27 5.13 16.79 3.71 10.39 7.21 1.08 1.90 18.44 22.21 21.93 13.16 12.27 2.29 9.62 19.73 5.88 8.73 14 E3_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 1.93 0.00 0.00 0.00 0.00 0.00 2.12 0.00 0.00 4.77 2.03 0.00 0.00 10.01 0.00 0.00 15 E3a_E4a KnownJunction 0 18.30 0.00 0.00 4.59 8.66 5.11 1.85 25.10 5.53 5.72 10.06 0.00 6.82 13.89 19.28 19.82 15.71 20.52 0.00 5.82 22.43 9.98 8.54 16 E4_Aa NovelBoundary 0 3.78 0.00 0.00 1.53 12.14 0.00 0.00 2.22 0.00 1.07 2.21 0.00 0.00 4.71 6.30 0.00 13.56 5.39 0.00 0.00 2.53 0.00 0.00 17 ER4a ExonRegion 0 29.33 0.80 3.19 5.18 16.45 4.85 8.69 22.48 7.72 12.64 4.35 3.43 0.76 21.69 39.33 28.09 14.55 21.63 3.89 10.13 24.26 9.85 16.18 18 E4a_E5a KnownJunction 0 101.35 0.00 3.46 4.86 12.65 2.10 7.77 31.13 7.41 9.86 4.79 12.15 6.49 18.95 42.15 29.39 30.57 11.98 4.05 21.09 34.10 2.76 4.27 19 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 3.84 20 ER5a ExonRegion 0 43.97 0.00 2.76 2.21 8.63 2.70 8.69 15.87 5.87 3.71 6.21 8.77 2.59 18.42 27.91 16.15 15.46 9.55 12.32 7.33 24.27 5.62 3.05 21 E5_Da NovelBoundary 1 104.09 6.58 6.53 1.33 24.70 7.84 20.80 33.52 15.28 13.08 4.69 0.00 13.64 19.25 43.88 87.75 22.35 42.49 0.00 9.40 31.69 17.57 33.89 22 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 12.99 2.90 0.00 4.23 3.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 0.00 0.00 2.72 0.00 0.00 23 I5 Intron 0 25.05 2.01 6.66 4.41 17.95 3.44 8.23 15.50 8.90 6.24 10.68 11.91 3.37 18.81 33.35 30.78 20.19 16.58 3.46 5.25 23.47 6.99 12.75 24 I5_AR1 ActiveIntronRegion 0 25.15 2.01 6.69 4.42 18.02 3.45 8.26 15.56 8.93 6.26 10.72 11.95 3.39 18.88 33.48 30.90 20.27 16.64 3.47 5.27 23.56 7.02 12.80 25 E6_Aa NovelBoundary 0 47.12 14.87 57.06 54.17 44.40 5.17 27.60 55.86 35.76 41.02 114.87 27.31 46.59 80.46 151.93 20.59 50.12 26.61 9.04 22.37 43.37 33.80 24.76 26 ER6a ExonRegion 0 5.95 3.15 2.99 1.75 5.49 8.65 5.70 8.00 3.50 1.59 3.11 1.29 0.00 2.06 1.97 0.27 0.71 2.47 1.80 1.04 5.16 1.16 0.92 27 E6_Da NovelBoundary 0 75.87 37.36 222.73 125.16 91.09 55.76 39.88 99.28 82.67 84.13 292.39 37.36 66.23 142.50 286.05 123.47 140.81 105.66 40.10 74.14 121.82 68.03 57.28 28 E6a_E7a KnownJunction 0 9.93 0.00 1.30 0.00 0.00 0.00 0.00 5.91 1.65 0.00 7.11 6.45 0.00 5.06 0.00 0.00 4.77 2.11 8.47 0.00 9.39 0.00 0.00 29 Ix Intron 0 44.71 34.37 104.70 47.19 41.99 36.52 23.17 40.42 26.66 29.40 96.24 25.44 11.91 84.83 112.58 77.13 79.69 59.32 34.61 64.85 61.18 39.61 46.97 30 Ix_AR1 ActiveIntronRegion 0 45.23 34.77 105.93 47.75 42.46 36.96 23.45 40.89 26.98 29.75 97.36 25.74 12.05 85.83 113.93 78.06 80.64 60.02 35.00 65.61 61.89 40.09 47.53 31 E7_Aa NovelBoundary 0 84.16 38.55 152.69 63.06 48.90 61.67 42.53 75.66 38.19 50.66 148.56 33.01 21.10 118.43 131.65 146.20 110.43 138.58 48.00 73.31 100.39 53.21 36.71 32 ER7a ExonRegion 0 56.57 17.40 78.67 34.29 46.29 53.99 17.29 30.74 24.72 22.02 50.95 26.97 27.74 88.77 137.06 66.11 64.84 66.18 43.37 49.42 43.79 61.97 40.06 33 E7_Da KnownBoundary 0 62.01 19.93 43.88 16.38 56.20 34.70 11.04 10.19 10.50 13.27 29.48 21.61 6.82 23.25 42.90 39.14 33.10 15.38 14.40 26.01 28.17 21.86 34.66 34 E7a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 35 ER7b ExonRegion 0 14.59 4.56 22.92 8.17 6.91 14.37 6.10 14.01 8.96 8.16 16.68 2.15 1.63 13.97 20.98 13.61 16.73 13.30 3.80 9.30 13.84 8.41 9.59 36 E7_Ab KnownBoundary 0 20.97 0.00 11.44 6.96 7.64 0.00 6.05 21.60 5.67 5.61 2.68 0.00 0.00 16.78 17.80 16.32 0.00 22.34 8.75 0.00 7.97 5.63 8.71 37 ER7c ExonRegion 0 24.54 3.42 12.50 10.32 11.32 2.65 3.93 13.63 4.36 6.82 9.37 5.63 2.09 8.48 15.34 11.05 4.79 9.37 4.17 8.77 11.66 4.04 6.72 38 IG39 Intergenic 0 6.96 10.25 23.48 14.90 14.36 5.28 9.13 6.41 4.79 5.38 4.74 8.85 5.78 4.45 8.75 8.79 7.07 12.34 6.82 8.44 6.11 2.72 9.12 39 IG39_SR3 SilentIntergenicRegion 0 6.94 10.68 24.36 15.28 14.58 5.75 8.73 6.19 4.72 4.84 3.88 7.97 5.92 4.24 9.11 9.42 7.24 12.60 7.18 8.07 6.25 2.91 9.97 40 IG39_AR6 ActiveIntergenicRegion 0 14.56 43.48 79.99 37.67 54.48 9.57 28.39 23.65 14.20 21.61 15.19 66.24 28.52 24.85 43.05 20.45 40.34 43.39 15.99 29.57 19.66 2.00 18.03 41 IG39_AR5 ActiveIntergenicRegion 0 14.32 25.72 79.58 48.02 32.90 15.21 19.86 23.69 16.42 21.93 24.90 64.18 24.55 19.01 30.72 37.06 27.96 44.56 33.91 39.92 18.54 8.09 40.94 42 IG39_AR4 ActiveIntergenicRegion 0 27.32 35.90 69.56 46.21 46.36 20.01 30.90 20.36 14.31 19.40 22.73 33.35 29.00 18.23 22.85 22.51 29.08 35.00 18.90 24.04 10.40 7.46 16.43 43 IG39_SR2 SilentIntergenicRegion 0 28.67 36.97 68.18 55.51 31.87 18.34 34.18 19.96 13.81 24.92 28.47 7.48 2.98 22.44 38.24 15.94 31.51 25.36 7.82 21.28 6.61 8.33 11.75 44 IG39_AR3 ActiveIntergenicRegion 0 23.39 27.48 52.00 44.35 18.66 20.88 20.98 14.67 7.95 19.47 22.15 5.55 2.65 13.16 18.97 26.14 29.79 24.83 10.37 16.31 8.42 5.50 9.94 45 IG39_AR2 ActiveIntergenicRegion 0 12.86 25.50 36.48 44.77 20.38 22.15 16.60 13.16 9.12 16.59 12.64 8.66 4.69 9.87 13.17 38.41 25.39 29.71 17.40 24.06 11.19 4.17 4.07 46 IG39_AR1 ActiveIntergenicRegion 0 18.22 20.40 54.29 37.93 42.18 14.92 26.18 16.39 9.71 13.48 15.81 17.46 8.48 13.83 29.31 26.85 24.11 35.79 15.64 24.26 13.49 2.83 9.73 47 IG39_SR1 SilentIntergenicRegion 0 7.60 12.00 19.14 20.31 21.65 6.51 16.90 6.86 5.01 7.41 14.78 22.68 5.73 8.45 19.57 14.92 7.48 20.50 7.59 12.02 8.70 5.55 8.44