Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	DPH1	Gene	0	72.93	66.11	189.01	110.20	63.31	178.18	22.46	84.54	81.22	105.96	117.65	37.74	66.50	135.04	177.55	108.94	82.57	73.91	38.78	54.26	138.59	96.70	110.18
2	263083	Transcript	0	51.60	39.19	110.52	55.30	33.91	94.49	12.21	44.45	38.52	59.08	59.14	15.85	26.90	77.80	97.31	51.47	42.12	28.04	18.64	24.19	51.89	48.05	54.02
3	442776	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	417873	Transcript	0	6.01	1.22	0.72	1.77	5.80	1.73	0.67	3.65	3.26	0.79	1.34	2.02	5.35	1.44	1.11	0.19	0.15	1.74	2.74	2.68	0.23	1.21	3.60
5	ER1a	ExonRegion	0	2.00	4.75	0.82	0.00	0.59	9.88	0.22	0.67	0.00	1.34	2.36	0.00	0.00	0.27	1.61	0.00	2.02	0.21	8.49	0.00	0.98	1.85	0.00
6	ER1b	ExonRegion	1	276.04	127.90	61.69	46.07	59.25	230.53	25.07	56.97	45.15	68.00	87.11	2.85	0.00	41.71	117.12	98.63	85.26	41.14	42.83	51.46	136.75	83.45	152.40
7	E1a_E2b	KnownJunction	0	43.56	41.77	79.62	42.32	11.29	62.24	7.60	68.84	49.77	74.00	9.79	5.85	0.00	7.30	27.81	16.24	13.56	41.87	12.61	8.50	23.54	18.37	49.94
8	ER2a	ExonRegion	0	6.01	1.22	0.72	1.77	5.80	1.73	0.67	3.65	3.26	0.79	1.34	2.02	5.35	1.44	1.11	0.19	0.15	1.74	2.74	2.68	0.23	1.21	3.60
9	E2_Ab	KnownBoundary	0	15.78	8.81	0.00	3.70	7.64	2.73	0.00	4.35	1.13	0.00	2.37	5.85	0.00	0.00	9.64	0.00	0.00	7.92	9.04	3.26	0.00	2.27	4.01
10	ER2b	ExonRegion	1	17.61	18.37	113.99	57.90	11.21	30.25	6.04	72.37	56.00	79.99	124.15	14.18	16.17	68.31	111.18	65.95	71.01	62.79	36.46	41.34	144.40	68.07	82.84
11	E2a_E3a	KnownJunction	1	43.27	33.48	271.07	174.80	23.85	50.94	7.38	118.91	108.51	155.83	108.50	30.01	26.78	167.87	375.06	334.36	53.20	224.72	83.11	103.87	176.37	249.77	358.61
12	ER3a	ExonRegion	1	23.05	27.36	230.70	147.45	30.35	85.01	6.99	124.83	102.55	131.64	139.83	51.01	78.63	104.30	210.25	206.52	48.79	199.53	61.42	75.83	126.02	131.88	229.29
13	E3a_E4a	KnownJunction	0	50.45	54.07	234.94	150.76	61.71	215.67	7.68	147.62	117.79	121.60	127.30	48.62	73.70	118.43	149.33	147.57	57.32	150.27	62.68	65.64	149.62	135.26	190.62
14	ER4a	ExonRegion	0	22.45	70.98	240.78	129.78	83.69	321.35	25.67	106.43	121.80	155.04	208.50	29.67	80.61	134.46	181.45	110.94	101.87	128.34	47.23	76.37	217.10	124.35	117.80
15	E4_Da	NovelBoundary	0	22.89	29.86	92.16	30.57	11.38	38.44	0.00	14.83	18.46	9.19	2.53	0.00	6.82	16.95	41.41	4.36	8.79	17.74	0.00	28.25	22.30	14.51	3.33
16	E4a_E5a	KnownJunction	0	34.45	161.42	259.69	145.04	41.68	223.22	26.06	120.10	103.85	171.35	225.79	45.31	140.09	135.15	191.48	143.38	70.50	112.59	47.25	61.74	162.60	126.94	133.17
17	I4	Intron	0	11.86	9.49	52.42	26.07	7.81	40.67	2.01	18.34	23.84	15.76	8.80	2.08	3.61	21.63	20.71	18.38	10.40	25.61	5.58	20.11	21.09	16.29	17.82
18	I4_AR1	ActiveIntronRegion	0	11.91	9.54	52.65	26.19	7.84	40.85	2.02	18.42	23.95	15.83	8.84	2.09	3.62	21.73	20.80	18.47	10.45	25.73	5.60	20.20	21.19	16.37	17.90
19	E5_Aa	NovelBoundary	0	14.37	17.50	71.35	36.79	16.04	76.55	0.00	23.99	31.89	38.06	12.53	26.56	0.00	19.13	10.38	27.17	3.83	36.19	8.47	35.79	24.90	12.92	20.32
20	ER5a	ExonRegion	0	101.19	93.21	283.50	167.86	65.17	194.25	23.62	138.90	141.15	191.80	186.33	64.75	124.46	235.99	254.98	204.91	138.22	156.43	71.35	86.25	230.04	176.91	182.70
21	E5a_E6a	KnownJunction	1	101.57	64.20	252.47	113.17	38.79	174.50	36.48	118.17	100.49	154.81	125.40	12.60	113.63	199.25	144.26	155.00	123.33	129.91	62.12	66.54	189.59	79.91	166.71
22	E6_Aa	NovelBoundary	0	0.00	0.00	19.51	22.01	8.06	19.48	6.67	11.75	8.25	6.55	9.48	0.00	0.00	4.24	0.00	0.00	4.39	20.56	0.00	6.01	3.15	4.78	3.33
23	ER6a	ExonRegion	0	68.51	76.63	251.10	126.04	48.45	235.99	20.39	112.97	104.49	154.50	170.13	54.44	110.64	217.69	217.59	165.05	136.50	109.73	53.58	73.04	231.10	99.63	136.82
24	E6_Da	NovelBoundary	0	10.15	31.18	78.35	69.55	45.67	120.84	0.00	35.65	39.53	44.05	18.06	0.00	12.50	77.70	27.20	18.88	28.61	22.51	0.00	38.29	37.62	16.90	63.42
25	E6a_E7a	KnownJunction	0	13.78	61.37	183.88	81.11	29.03	110.96	17.71	110.69	50.98	113.63	71.44	24.31	31.98	102.54	87.27	93.65	64.52	65.62	21.84	33.24	126.95	62.46	44.39
26	I6	Intron	0	25.93	25.54	54.55	46.15	45.13	96.70	8.40	27.21	35.86	27.01	24.45	10.43	14.30	43.18	45.92	37.99	23.88	31.48	15.56	32.49	36.67	22.38	37.67
27	I6_AR3	ActiveIntronRegion	1	19.59	8.34	51.03	31.38	49.67	90.47	1.73	18.04	22.36	22.53	27.36	3.66	8.18	56.22	47.24	34.60	20.65	23.22	3.19	30.39	30.23	12.23	52.03
28	I6_AR4	ActiveIntronRegion	1	22.01	18.10	57.59	36.80	71.44	117.91	3.97	20.74	25.94	27.53	37.11	2.16	14.54	74.22	64.70	60.93	37.30	32.89	15.29	37.66	33.50	18.75	66.66
29	I6_AR5	ActiveIntronRegion	1	16.14	15.00	53.38	36.03	46.66	85.16	2.73	18.36	24.93	26.95	26.21	7.85	15.24	62.93	55.31	46.81	25.38	32.57	19.11	25.27	25.76	14.58	43.87
30	I6_SR1	SilentIntronRegion	1	27.19	28.03	58.87	50.69	47.23	100.94	9.09	29.92	39.55	29.31	24.44	11.33	14.52	43.82	46.50	39.55	25.11	34.15	16.77	33.99	39.50	23.34	37.57
31	I6_AR6	ActiveIntronRegion	0	19.15	8.36	0.00	0.00	15.41	57.32	6.53	0.00	0.00	0.00	25.41	5.87	19.06	23.84	40.80	19.56	10.86	1.52	7.86	19.25	7.25	22.28	31.40
32	E7_Aa	NovelBoundary	0	48.75	41.70	133.79	108.38	41.85	87.56	12.54	80.01	52.49	45.56	31.96	0.00	19.64	62.98	36.47	49.90	25.15	41.74	17.51	29.15	64.99	24.80	88.52
33	ER7a	ExonRegion	0	97.39	116.44	232.45	133.78	147.67	355.12	24.35	114.88	84.78	135.33	150.26	63.25	118.68	259.58	229.20	214.21	89.32	117.37	94.64	66.51	224.08	123.11	172.79
34	E7_Da	NovelBoundary	0	11.11	8.75	55.65	10.82	16.72	20.95	0.00	10.80	9.32	10.99	4.74	6.30	0.00	6.95	17.68	3.85	4.21	19.81	17.51	5.94	5.37	5.82	4.01
35	E7a_E8a	KnownJunction	1	125.06	127.41	330.74	207.10	196.69	455.31	38.11	119.36	141.78	136.22	153.83	61.37	107.14	302.37	211.39	223.79	75.74	118.64	92.90	67.05	215.54	91.91	207.43
36	E8_Aa	NovelBoundary	0	6.59	10.06	35.54	24.91	7.64	46.73	9.85	14.58	13.60	12.65	4.53	0.00	0.00	11.07	14.09	16.49	0.00	34.32	0.00	8.12	10.50	2.39	23.99
37	ER8a	ExonRegion	0	74.51	80.58	276.25	169.65	88.25	293.89	27.47	107.84	119.92	127.29	136.60	38.52	86.84	176.16	195.64	133.90	100.48	103.45	40.19	70.55	218.35	100.15	136.26
38	E8_Da	NovelBoundary	0	0.00	3.35	25.13	3.23	4.24	0.00	10.20	19.63	22.19	10.37	5.37	0.00	0.00	9.54	27.44	7.78	12.44	4.27	16.66	3.26	20.14	28.04	11.27
39	E8a_E9a	KnownJunction	0	123.58	99.46	294.22	193.65	46.60	243.67	21.51	116.65	104.37	139.20	138.77	22.66	61.52	163.99	175.17	169.02	120.71	115.03	52.71	70.88	226.85	121.49	106.53
40	I8	Intron	0	19.10	7.98	15.76	14.34	13.65	13.67	3.64	8.08	13.72	8.72	13.65	0.00	4.33	13.19	16.40	12.83	7.77	14.78	2.50	9.18	14.71	12.26	20.74
41	I8_AR1	ActiveIntronRegion	0	19.40	8.10	16.00	14.57	13.86	13.88	3.69	8.21	13.92	8.85	13.85	0.00	4.40	13.40	16.64	13.03	7.89	15.01	2.54	9.33	14.94	12.44	21.06
42	E9_Aa	NovelBoundary	0	16.82	6.12	24.63	18.25	14.69	20.33	7.99	35.49	27.17	5.67	9.48	0.00	12.50	19.54	15.95	0.00	4.02	11.15	4.05	2.81	23.54	19.29	19.89
43	ER9a	ExonRegion	0	94.22	77.86	244.50	153.79	74.52	228.48	22.80	97.22	124.11	110.30	149.08	29.02	50.71	153.25	183.87	137.07	119.29	109.02	33.30	70.65	218.95	117.98	129.85
44	E9_Da	NovelBoundary	0	7.41	15.98	35.36	26.87	7.47	75.75	4.50	11.30	18.29	23.40	22.58	0.00	0.00	11.42	4.45	0.00	0.00	12.44	0.00	11.70	17.11	12.12	17.41
45	E9a_E10a	KnownJunction	0	91.05	62.16	150.53	99.65	50.00	255.53	24.51	45.30	99.30	99.36	107.97	12.00	26.30	120.61	97.78	84.34	30.20	77.89	28.71	50.62	129.92	79.42	78.45
46	I9	Intron	0	13.66	9.01	35.82	25.19	17.61	34.35	4.19	11.73	14.21	14.06	8.81	0.45	0.98	6.78	9.03	7.15	5.85	11.27	4.43	9.15	8.92	17.14	24.16
47	I9_AR1	ActiveIntronRegion	0	13.73	9.05	36.00	25.31	17.70	34.52	4.21	11.79	14.27	14.13	8.85	0.45	0.98	6.81	9.08	7.18	5.87	11.33	4.46	9.20	8.96	17.22	24.28
48	E10_Aa	NovelBoundary	0	19.04	15.26	35.33	23.41	12.56	13.63	3.71	8.42	6.37	23.80	7.26	0.00	0.00	2.41	13.35	12.05	12.81	4.44	3.76	11.25	14.33	63.87	52.16
49	ER10a	ExonRegion	0	81.50	69.14	159.78	87.31	72.55	239.46	24.38	63.54	94.79	96.05	120.04	19.02	62.45	120.25	138.49	90.89	72.03	65.91	18.95	42.71	162.27	94.76	103.60
50	E10_Da	NovelBoundary	0	35.34	19.34	32.14	21.41	12.99	68.99	12.37	24.52	30.96	15.63	12.90	0.00	0.00	26.55	26.70	12.82	20.66	25.78	4.14	6.52	22.55	46.72	77.08
51	E10a_E11a	KnownJunction	0	69.20	79.26	168.39	95.86	38.79	212.83	5.56	87.08	91.69	95.31	85.18	23.11	12.50	83.23	107.05	75.19	82.56	58.95	16.28	42.31	119.29	85.36	61.97
52	I10	Intron	0	3.86	2.96	2.66	2.96	2.92	16.03	0.48	1.88	4.02	2.49	2.11	0.00	0.00	12.22	7.15	3.25	4.81	3.35	2.32	3.88	4.01	25.81	48.14
53	I10_AR1	ActiveIntronRegion	0	3.90	3.01	2.70	3.00	2.97	16.24	0.49	1.90	4.07	2.53	2.14	0.00	0.00	12.38	7.23	3.27	4.88	3.40	2.35	3.93	4.07	26.18	48.80
54	E11_Aa	NovelBoundary	1	25.86	8.22	77.38	49.84	8.23	73.54	12.01	41.03	26.39	18.32	9.16	7.65	6.82	22.25	32.63	43.49	0.00	43.15	8.66	28.89	9.82	44.15	78.96
55	ER11a	ExonRegion	0	61.81	52.34	129.46	62.26	50.73	158.59	19.07	58.23	61.34	63.39	70.89	9.67	23.68	103.72	134.22	74.83	53.49	43.52	14.48	53.75	95.37	65.89	83.85
56	E11_Da	NovelBoundary	0	0.00	3.35	8.31	3.26	0.00	0.00	0.00	5.83	3.41	1.67	4.69	0.00	0.00	2.18	0.00	0.00	0.00	0.00	0.00	0.00	5.75	27.43	41.49
57	E11a_E12a	KnownJunction	0	56.53	64.20	118.09	63.13	39.22	158.49	7.46	69.87	51.01	83.22	42.59	0.00	6.17	133.38	158.97	50.76	52.27	44.19	4.24	44.87	73.27	38.76	39.10
58	I11	Intron	0	4.44	3.55	7.65	4.26	2.80	0.64	0.46	5.40	1.93	2.39	2.70	0.00	1.64	3.37	4.83	0.00	0.00	3.53	2.23	4.46	10.78	16.74	25.65
59	I11_AR1	ActiveIntronRegion	0	4.50	3.60	7.76	4.32	2.84	0.65	0.47	5.47	1.96	2.42	2.74	0.00	1.66	3.42	4.90	0.00	0.00	3.58	2.26	4.52	10.91	16.97	25.98
60	E12_Aa	NovelBoundary	0	14.45	3.29	13.87	0.00	12.65	0.00	4.24	25.75	13.77	1.29	4.47	0.00	0.00	0.00	0.00	0.00	0.00	11.32	0.00	6.26	7.91	35.27	47.38
61	ER12a	ExonRegion	1	56.25	62.95	98.53	36.57	39.99	142.53	7.72	39.27	43.71	48.18	72.29	6.06	8.86	124.84	136.20	47.32	49.59	27.33	4.71	32.01	106.51	73.34	68.98
62	E12_Da	NovelBoundary	0	113.06	60.25	120.04	59.50	29.03	149.29	10.11	53.89	64.21	70.86	71.12	5.70	5.68	111.25	99.76	53.23	23.28	45.64	31.53	52.16	92.23	77.77	85.45
63	E12_Db	NovelBoundary	0	45.27	21.90	60.97	25.47	8.66	72.91	5.96	49.62	39.76	35.59	15.58	6.30	6.82	28.67	15.08	15.64	17.77	31.79	4.80	16.04	46.83	32.88	53.95
64	E12b_E13a	KnownJunction	0	64.97	44.93	126.02	57.97	31.49	98.13	8.21	49.33	40.25	68.26	61.59	10.50	12.82	70.28	81.34	59.47	47.50	35.98	12.99	19.75	44.73	43.35	56.17
65	ER12b	ExonRegion	1	59.97	37.96	112.87	38.84	28.69	108.40	9.93	43.31	41.17	60.98	68.19	0.00	15.37	105.48	99.29	48.05	38.88	26.38	14.33	28.01	66.97	48.38	62.49
66	I12	Intron	1	13.11	8.72	17.41	11.62	12.75	31.48	4.42	7.37	14.04	11.40	8.29	3.40	11.05	33.65	22.29	22.67	1.57	12.69	1.52	20.28	25.21	19.86	39.19
67	I12_AR1	ActiveIntronRegion	1	13.36	8.89	17.73	11.82	13.00	32.08	4.50	7.51	14.30	11.60	8.45	3.46	11.21	34.28	22.71	23.04	1.57	12.92	1.55	20.63	25.67	20.24	39.91
68	Ix	Intron	0	47.46	36.98	93.38	88.03	51.22	110.82	9.05	74.32	66.19	42.53	29.60	11.73	38.97	67.96	55.07	46.73	24.37	43.94	30.05	25.60	78.00	70.65	128.09
69	Ix_AR1	ActiveIntronRegion	0	47.72	37.17	93.87	88.48	51.49	111.41	9.10	74.71	66.53	42.75	29.76	11.80	39.18	68.32	55.36	46.99	24.50	44.17	30.21	25.73	78.41	71.02	128.74
70	ER13a	ExonRegion	0	79.44	69.11	202.39	124.38	74.86	161.54	30.48	84.48	72.65	105.77	104.43	52.91	79.42	135.16	207.01	98.37	80.08	49.60	38.76	48.98	94.88	98.62	97.42
71	IG37	Intergenic	0	5.64	8.22	10.48	17.17	20.17	16.16	7.15	13.38	14.91	12.91	2.36	4.11	2.53	3.18	4.63	3.53	2.19	5.94	3.57	7.12	19.67	56.14	90.34
72	IG37_AR1	ActiveIntergenicRegion	0	18.51	26.20	38.75	76.87	48.06	51.95	19.78	48.03	39.71	46.09	8.48	16.68	9.55	13.44	18.52	15.69	11.15	21.42	9.20	24.34	36.92	107.36	165.21
73	IG37_SR1	SilentIntergenicRegion	0	3.79	6.12	9.42	6.56	12.46	25.70	8.80	12.56	17.09	12.92	2.86	4.22	4.97	1.36	5.95	6.37	1.41	2.42	2.25	7.87	17.26	55.38	85.85
74	IG37_AR2	ActiveIntergenicRegion	0	17.13	1.65	0.00	0.00	4.33	10.39	4.29	0.00	0.00	0.09	3.13	0.00	0.00	2.94	6.36	2.41	0.00	1.50	5.16	12.06	5.35	21.99	21.49
75	IG37_AR3	ActiveIntergenicRegion	0	3.82	11.58	8.29	14.01	37.98	23.28	10.25	12.99	9.97	14.00	2.03	4.81	0.00	2.67	4.25	2.26	0.50	3.71	3.11	7.39	13.76	52.27	70.33
76	IG37_SR2	SilentIntergenicRegion	0	3.16	4.91	5.17	5.66	15.05	8.19	4.80	6.82	9.28	6.36	1.11	1.43	0.73	0.60	1.19	0.98	0.61	3.17	2.89	2.84	14.33	48.03	79.31
77	IG37_AR4	ActiveIntergenicRegion	0	2.12	0.18	5.24	3.10	4.86	0.00	1.32	11.78	22.91	5.00	2.11	0.00	0.00	0.00	0.00	1.08	0.00	4.70	1.74	4.26	57.70	95.84	129.48
78	IG37_AR5	ActiveIntergenicRegion	0	2.12	2.03	6.13	2.53	5.35	1.05	1.32	7.65	20.47	5.73	1.93	0.00	0.00	0.00	2.90	0.00	0.00	4.75	3.19	4.56	43.76	79.77	118.72
79	IG37_AR6	ActiveIntergenicRegion	0	1.72	2.03	4.75	2.73	5.02	1.83	1.32	2.48	23.70	5.73	0.85	0.00	0.00	0.71	2.90	0.00	0.00	3.00	3.19	6.38	30.44	68.50	114.90
80	IG37_AR7	ActiveIntergenicRegion	0	1.69	1.27	3.62	2.63	4.93	1.14	1.32	3.92	17.10	2.99	0.55	0.51	3.92	2.03	1.36	0.00	0.00	3.73	1.50	3.57	30.82	57.36	108.16
81	IG37_SR3	SilentIntergenicRegion	0	0.66	0.00	0.90	0.31	0.18	0.49	0.00	0.23	1.61	0.78	0.00	0.00	0.00	0.98	0.94	0.00	0.00	0.00	0.00	0.00	7.96	5.60	15.41