Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RANGRF Gene 0 33.94 13.70 69.84 33.48 19.66 21.03 11.43 34.71 32.39 36.73 124.63 20.53 21.09 59.74 92.62 61.56 56.98 42.49 18.62 31.28 37.54 37.47 31.55 2 439238 Transcript 0 4.73 1.69 5.85 1.94 2.77 0.37 0.64 5.63 1.87 2.31 3.63 0.68 0.32 2.26 5.77 2.84 3.41 3.53 2.15 1.34 1.04 1.69 3.93 3 407006 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 226105 Transcript 0 47.27 24.36 55.97 35.34 36.63 18.20 16.01 38.49 24.48 24.63 100.41 24.49 36.07 56.00 90.06 32.71 42.20 22.98 10.30 14.54 30.29 28.06 15.08 5 314193 Transcript 0 0.00 0.00 27.51 9.76 0.00 0.00 0.00 10.95 13.35 14.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.44 0.00 0.00 0.00 0.00 0.00 6 ER1a ExonRegion 1 39.96 6.10 40.39 19.40 5.73 18.05 5.67 23.12 21.24 30.71 98.79 1.53 0.00 13.76 26.79 18.83 60.83 12.70 15.07 28.05 33.61 30.08 19.25 7 E1_Ab KnownBoundary 1 58.38 5.59 43.05 11.59 0.00 13.00 2.08 16.10 6.92 14.08 55.22 0.00 0.00 17.19 55.88 16.32 50.12 16.42 0.00 14.96 40.16 11.33 7.51 8 ER1b ExonRegion 1 18.94 5.11 59.53 25.73 8.06 5.67 2.09 33.11 26.85 44.62 153.41 3.59 1.85 57.78 70.36 51.43 85.08 44.32 19.03 48.24 41.41 39.12 48.26 9 E1_Da NovelBoundary 0 6.52 0.00 9.91 2.06 3.31 5.56 5.34 12.49 6.42 9.32 7.58 12.30 0.00 11.89 22.99 4.36 13.18 10.78 0.00 9.14 13.96 5.27 16.65 10 E1a_E2a KnownJunction 1 14.30 13.29 140.44 63.63 26.40 15.84 6.23 72.87 68.72 95.17 389.31 0.00 13.31 208.43 334.38 174.23 217.48 127.88 81.60 148.16 110.83 157.06 157.07 11 ER2a ExonRegion 0 5.75 10.50 73.17 27.17 18.63 23.20 11.23 30.71 35.96 41.33 94.24 19.50 14.94 63.36 102.14 80.28 46.69 73.78 29.07 46.99 30.19 56.94 44.48 12 E2_Da NovelBoundary 0 10.59 11.25 86.48 29.13 32.68 45.60 14.40 20.41 30.06 32.77 54.75 6.00 18.83 69.63 79.61 43.92 22.53 66.53 12.05 39.63 19.03 25.41 0.00 13 E2a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E2_Db NovelBoundary 0 15.56 3.09 6.77 2.06 11.88 22.03 13.73 2.55 0.00 1.34 5.21 0.00 0.00 4.59 8.90 7.86 0.00 3.94 4.61 8.37 8.22 2.76 4.35 15 E2b_E3a KnownJunction 1 70.46 18.29 104.43 48.35 96.77 168.48 62.93 53.31 52.26 67.50 191.57 99.18 96.26 98.30 214.35 179.95 74.15 106.74 46.68 74.08 58.38 62.34 73.41 16 ER2b ExonRegion 0 29.21 15.46 90.68 35.71 52.44 96.82 32.57 43.21 45.45 55.51 137.24 53.69 75.04 94.52 141.58 97.49 52.15 67.63 26.12 64.26 36.58 35.00 37.00 17 ER2c ExonRegion 0 46.56 14.69 97.76 42.10 66.60 116.34 42.07 43.02 48.72 61.55 168.59 70.23 85.46 103.40 161.83 129.12 59.42 78.02 36.45 59.34 44.32 53.48 57.75 18 E3_Aa NovelBoundary 0 29.93 3.16 30.63 8.29 32.60 39.30 14.31 11.34 13.48 11.63 10.06 13.80 0.00 21.96 8.90 19.99 4.11 33.83 4.61 5.50 14.39 2.76 3.84 19 ER3a ExonRegion 0 27.46 8.06 76.02 36.85 27.82 42.27 20.80 36.90 43.38 50.19 131.39 35.26 28.14 89.13 129.16 97.51 47.13 59.80 32.43 36.45 33.48 48.93 52.93 20 E3_Da KnownBoundary 0 18.74 15.19 43.61 24.04 6.71 2.73 2.12 18.73 30.53 18.45 50.70 0.00 18.34 49.74 50.19 28.03 17.77 52.44 26.45 24.42 18.53 19.84 9.99 21 E3a_E3b KnownJunction 0 0.00 0.00 55.02 19.51 0.00 0.00 0.00 21.89 26.71 28.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30.88 0.00 0.00 0.00 0.00 0.00 22 E3_Ab KnownBoundary 0 6.82 12.83 86.96 11.45 0.00 2.90 1.77 21.11 22.86 29.55 102.18 5.70 8.28 40.73 43.64 29.99 43.48 19.11 0.00 41.74 33.79 23.15 7.34 23 ER3b ExonRegion 0 9.52 7.80 75.56 23.62 2.68 2.75 1.32 25.93 34.79 34.22 102.44 10.10 10.16 85.27 97.19 39.13 36.31 35.72 22.83 23.05 28.65 28.13 20.07 24 ER3c ExonRegion 0 52.10 19.83 100.03 38.34 14.48 17.80 7.87 45.80 44.77 50.83 209.04 19.86 17.66 77.62 109.39 82.08 75.87 37.44 9.65 51.06 55.22 31.01 27.77 25 E3_Db KnownBoundary 0 10.00 0.00 58.22 29.30 7.72 9.20 1.99 23.12 21.59 26.19 16.74 0.00 0.00 37.85 22.25 15.89 18.23 21.68 16.94 19.30 9.02 30.74 8.45 26 E3b_E3c KnownJunction 0 143.28 48.15 123.33 68.72 45.67 37.31 23.89 61.86 58.16 57.11 319.24 62.72 35.06 182.83 289.02 156.63 133.99 56.58 29.93 65.13 99.52 57.62 59.58 27 E3b_E4a NovelJunction 1 7.19 13.16 20.40 6.46 0.00 2.38 1.90 25.75 14.50 6.61 16.74 0.00 0.00 2.47 27.44 15.47 12.72 5.84 0.00 9.20 0.00 3.12 0.00 28 ER3d ExonRegion 0 4.73 1.69 5.85 1.94 2.77 0.37 0.64 5.63 1.87 2.31 3.63 0.68 0.32 2.26 5.77 2.84 3.41 3.53 2.15 1.34 1.04 1.69 3.93 29 E3_Ac KnownBoundary 0 7.11 12.30 11.29 3.46 4.33 8.69 6.67 9.73 4.75 5.99 2.16 0.00 0.00 0.00 0.00 8.20 4.58 8.29 0.00 0.00 2.97 0.00 0.00 30 ER3e ExonRegion 0 70.72 31.13 94.46 48.59 18.50 31.24 15.91 46.61 44.63 48.17 189.62 41.65 32.10 80.42 126.60 116.53 59.87 66.90 31.03 31.80 53.38 52.38 44.86 31 E3_Dc NovelBoundary 1 272.42 19.21 110.55 61.76 45.25 94.21 39.53 53.56 44.53 48.08 144.51 40.51 35.55 17.89 83.07 253.18 60.50 87.43 65.51 35.47 30.58 65.34 123.35 32 E3_De NovelBoundary 0 64.46 21.77 104.14 39.92 53.74 53.89 11.00 41.85 24.91 25.57 61.38 12.60 19.64 70.99 151.06 57.34 65.83 84.90 43.11 55.54 45.90 56.64 40.46 33 E3e_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER3f ExonRegion 1 76.10 14.94 67.50 25.12 5.58 29.34 14.97 23.37 29.05 31.37 175.73 67.95 83.60 95.26 163.86 164.37 70.32 64.75 31.72 27.66 42.45 61.96 67.03 35 ER3g ExonRegion 0 96.30 12.20 63.72 20.44 14.72 21.09 11.92 21.61 32.11 24.66 227.12 60.61 68.01 122.62 179.88 142.66 85.82 51.74 33.45 22.34 47.38 54.17 64.61 36 ER3h ExonRegion 0 96.30 11.18 66.17 19.76 14.72 16.50 9.27 22.47 31.50 24.66 239.68 51.95 51.59 123.43 165.37 112.94 90.77 48.97 27.08 18.09 46.28 52.09 57.26 37 Ix Intron 0 44.71 34.37 104.70 47.19 41.99 36.52 23.17 40.42 26.66 29.40 96.24 25.44 11.91 84.83 112.58 77.13 79.69 59.32 34.61 64.85 61.18 39.61 46.97 38 Ix_AR1 ActiveIntronRegion 0 45.23 34.77 105.93 47.75 42.46 36.96 23.45 40.89 26.98 29.75 97.36 25.74 12.05 85.83 113.93 78.06 80.64 60.02 35.00 65.61 61.89 40.09 47.53 39 E4_Aa NovelBoundary 0 62.97 31.44 139.00 62.33 105.09 102.44 62.62 42.51 44.88 42.84 124.87 6.30 17.86 86.88 157.49 107.24 89.67 99.36 66.26 82.26 32.99 75.19 26.89 40 ER4a ExonRegion 0 33.49 16.96 129.50 67.11 29.54 21.98 15.42 55.34 53.90 49.96 176.13 25.73 27.99 94.20 154.42 82.55 93.20 67.47 20.19 36.02 64.30 47.60 34.46 41 E4_Da KnownBoundary 1 20.45 2.43 79.12 32.16 15.37 5.22 18.95 47.07 26.13 31.00 97.66 17.86 19.64 16.36 50.31 9.74 66.01 26.94 4.80 19.75 45.59 7.84 0.00 42 ER4b ExonRegion 0 47.27 24.36 55.97 35.34 36.63 18.20 16.01 38.49 24.48 24.63 100.41 24.49 36.07 56.00 90.06 32.71 42.20 22.98 10.30 14.54 30.29 28.06 15.08