Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 YWHAE Gene 0 1291.81 4367.63 1649.65 1205.68 1833.82 2245.07 744.63 1496.70 953.53 1722.29 1927.70 1641.56 1014.38 1734.49 1802.32 1518.08 1605.31 1883.48 1070.81 1859.17 980.87 1154.14 748.27 2 264335 Transcript 0 1237.05 3592.00 1699.13 1086.25 1166.31 1856.96 668.76 1461.74 926.36 1737.52 1961.57 2349.15 1412.71 2141.68 1605.70 1408.58 1692.08 1462.06 1119.18 1734.39 973.40 1297.44 580.31 3 486241 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 489287 Transcript 0 14.17 11.01 21.89 24.57 16.42 18.01 14.41 11.91 6.67 9.44 3.27 8.97 14.11 3.75 17.77 16.49 13.62 3.83 8.98 15.01 6.33 9.54 15.79 5 440251 Transcript 0 0.00 0.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 414131 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 469398 Transcript 0 13.14 23.47 22.49 26.40 26.30 25.77 8.66 38.20 32.96 53.79 33.49 9.72 19.14 29.87 21.86 20.58 24.99 33.12 16.16 91.59 47.55 12.78 15.41 8 498643 Transcript 0 0.00 0.01 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 1.20 0.00 0.00 0.00 0.01 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 9 466227 Transcript 1 51.85 205.39 245.99 114.14 145.83 233.35 69.84 272.66 208.37 437.35 801.67 58.45 87.94 218.44 179.21 130.72 624.69 304.51 97.95 523.93 590.07 76.29 78.56 10 496706 Transcript 0 0.00 3.25 0.01 1.00 0.00 2.71 1.30 0.00 0.00 0.00 0.64 2.58 0.00 2.56 2.22 2.99 0.00 0.08 1.06 3.65 0.77 1.37 0.00 11 ER1a ExonRegion 0 24.69 81.34 11.85 8.18 85.62 163.82 46.78 5.76 2.88 8.79 38.66 0.00 0.00 90.41 53.19 28.73 28.61 52.35 19.11 89.36 24.98 15.97 29.37 12 ER1b ExonRegion 0 286.67 623.63 82.92 46.49 541.69 1108.02 276.85 69.14 35.54 86.27 310.55 5.77 7.82 340.34 266.59 225.22 234.00 406.09 99.10 389.83 194.42 140.98 181.42 13 ER1c ExonRegion 1 1349.78 3961.91 703.26 511.97 1889.51 6357.18 1596.18 678.86 546.10 1033.55 2260.47 41.79 316.43 2351.23 2023.42 2046.04 1987.75 2283.78 1019.77 3119.36 1762.02 825.80 1238.48 14 E1_Ad KnownBoundary 1 2131.49 6009.19 1004.40 757.71 2639.05 8566.94 2417.33 989.72 723.89 1366.39 3003.92 78.93 290.24 2340.29 2272.58 2883.77 2776.34 3509.11 1535.29 4309.10 2465.53 935.89 1791.26 15 E1_Ae KnownBoundary 1 652.34 1974.71 602.08 480.59 967.66 4263.79 867.53 806.04 685.70 1125.06 1034.63 162.05 78.89 293.84 247.48 1294.62 1068.63 2306.59 801.43 1620.17 782.16 874.41 781.84 16 ER1d ExonRegion 1 1397.83 4360.25 1018.97 764.92 1685.22 7359.38 1717.34 1085.69 908.97 1629.11 2467.22 80.37 252.97 2109.22 1372.47 2620.49 2291.03 3137.36 1372.10 3529.11 2085.26 1145.94 1509.07 17 ER1e ExonRegion 1 290.01 970.06 670.12 390.28 440.68 1561.73 343.82 732.04 623.85 1110.93 1043.50 129.24 134.04 462.78 448.38 527.38 906.06 1246.96 341.67 1051.18 868.19 298.58 339.85 18 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E1a_E3a KnownJunction 0 9.85 17.04 5.03 9.76 14.86 22.32 3.97 25.10 23.15 38.14 35.85 6.00 20.78 11.18 32.76 7.78 16.92 32.29 8.66 66.79 64.62 8.88 11.87 20 E1a_E4b KnownJunction 1 208.56 734.87 1000.73 374.01 389.56 705.56 206.55 1010.42 778.00 1660.44 2803.29 237.38 283.91 792.05 664.94 355.12 2194.39 1007.19 335.16 1718.54 2169.62 281.18 237.57 21 ER2a ExonRegion 0 0.00 0.03 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.41 0.00 0.00 0.00 0.01 0.00 0.03 0.01 0.00 0.00 0.00 0.00 0.00 22 ER3a ExonRegion 0 12.19 26.01 30.41 35.27 31.05 28.34 9.55 53.16 44.20 79.97 46.68 8.40 27.43 37.65 21.98 23.33 35.51 53.14 14.29 114.76 66.71 11.68 15.84 23 E3a_E4b KnownJunction 0 18.67 42.10 48.87 52.94 55.01 50.03 14.22 69.00 59.66 90.04 48.33 6.30 26.46 66.75 28.93 33.07 44.23 45.39 31.81 175.45 58.87 20.57 16.30 24 ER4a ExonRegion 1 103.71 410.78 491.99 228.28 291.66 466.70 139.68 545.33 415.00 869.35 1603.34 116.90 175.88 436.89 348.15 257.09 1249.39 606.99 195.90 1047.87 1174.58 150.01 157.11 25 ER4b ExonRegion 0 397.50 2572.39 1953.12 1417.80 2206.94 3500.00 777.96 2051.76 1476.47 2658.36 3440.92 1968.06 1679.97 2707.89 2153.50 2293.33 2732.00 2999.72 1353.00 3460.49 1519.45 1468.95 1272.36 26 E4_Da KnownBoundary 0 29.63 20.39 27.70 49.31 37.18 44.29 63.82 19.67 17.82 23.58 5.21 12.60 27.27 7.06 8.90 34.69 24.87 8.33 30.31 30.49 5.87 25.72 40.97 27 E4a_E6a KnownJunction 0 899.57 7378.82 3096.43 2185.07 3524.54 8295.73 2386.73 2772.21 1806.35 3319.60 3897.67 3852.51 2718.17 2745.32 2171.83 2321.70 2864.14 3552.06 1505.17 3228.58 1289.42 1852.74 1086.16 28 ER4c ExonRegion 0 14.17 11.01 21.89 24.57 16.42 18.01 14.41 11.91 6.67 9.44 3.27 8.97 14.11 3.75 17.77 16.49 13.62 3.83 8.98 15.01 6.33 9.54 15.79 29 ER5a ExonRegion 0 0.00 0.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER6a ExonRegion 0 1248.13 8001.64 2692.71 1858.42 2079.70 4521.38 1426.21 2800.53 1794.01 3366.38 3782.05 3748.33 2171.72 3206.61 2428.50 2700.20 3208.35 3649.73 1846.83 3501.33 1684.30 2379.70 1343.24 31 E6_Da KnownBoundary 0 1144.43 5103.30 2173.70 1421.46 1134.72 1444.45 578.80 2471.10 1456.41 2716.82 1854.00 2239.03 1351.05 2047.39 1460.79 1462.69 2175.87 2011.57 1013.02 2323.20 1255.19 1408.55 670.02 32 E6a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 5.35 0.00 0.00 0.00 0.00 10.26 4.36 0.00 2.03 0.00 0.00 5.56 2.57 0.00 33 E6_Db KnownBoundary 0 27.04 57.23 16.32 8.26 35.40 31.80 25.31 5.09 1.79 8.33 39.38 179.76 256.80 179.65 66.63 42.98 39.27 10.11 26.07 46.15 18.29 47.52 23.47 34 E6b_E7c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 E6_Dc KnownBoundary 0 15.41 13.29 13.10 17.71 20.63 16.58 24.95 26.53 16.98 20.28 4.95 20.26 6.82 12.24 13.35 26.32 4.77 9.62 9.32 31.19 0.00 17.45 29.96 36 E6c_E7a KnownJunction 0 2807.83 7700.73 3560.61 2231.48 2404.33 3829.95 1462.23 2957.91 1866.88 3532.88 3947.79 4906.45 2994.93 4443.25 3483.17 2959.14 3419.07 2910.15 2357.90 3503.43 1911.21 2741.73 1174.25 37 ER6b ExonRegion 0 2009.54 7175.21 2989.13 1929.47 2279.25 3202.81 1047.13 2861.53 1788.90 3380.55 3525.96 4046.87 3017.82 4064.73 2919.98 2747.87 3546.36 3115.81 1912.96 3583.93 1991.15 2433.17 1088.69 38 ER6c ExonRegion 0 2034.84 6706.74 3078.13 2001.12 2168.46 3328.88 1161.43 2842.39 1792.37 3371.63 3692.18 4283.12 2818.43 4049.79 2934.19 2729.64 3355.46 2847.93 2087.72 3384.09 1885.60 2482.21 1100.38 39 ER6d ExonRegion 0 16.50 19.89 39.06 30.29 26.44 9.52 21.20 37.79 24.95 39.80 7.46 31.66 21.01 9.69 17.36 34.25 11.77 9.74 17.69 37.18 4.78 26.84 32.08 40 ER6e ExonRegion 0 11.85 8.74 5.64 7.63 4.28 2.38 6.88 5.53 4.82 7.00 3.09 18.18 1.88 3.90 3.77 18.13 3.30 1.66 9.87 9.36 0.00 10.00 17.62 41 ER7a ExonRegion 0 2076.30 6548.94 3206.80 2080.04 2151.84 3416.00 1157.94 2860.25 1822.78 3387.96 3847.63 4475.80 2644.24 4022.62 2871.08 2630.33 3308.16 2879.16 2091.51 3312.75 1953.81 2417.30 1105.35 42 ER7b ExonRegion 0 2275.26 6777.92 3257.04 2108.38 2116.52 3394.36 1204.80 2869.23 1831.68 3418.92 4010.77 4749.42 2715.53 4061.92 2924.46 2683.83 3423.03 2960.10 2153.31 3451.05 2045.04 2477.30 1136.48 43 ER7c ExonRegion 0 2814.25 7655.22 2970.51 2113.24 1912.10 2515.02 940.81 2648.97 1723.02 3176.63 3294.37 4591.06 2103.18 3493.18 2598.95 2387.50 3078.02 3112.60 1598.83 3381.74 1872.31 2232.39 1034.77 44 E7_Da KnownBoundary 0 2403.39 9034.25 2883.01 2208.74 1906.20 2764.83 957.32 3060.34 1858.81 3268.32 2601.66 3911.92 1703.95 3530.07 3011.94 2787.82 2651.24 4588.14 1918.93 3538.58 1833.80 2543.33 1336.87 45 ER7d ExonRegion 0 1326.05 7455.40 3004.44 2125.88 3660.13 4998.24 1661.82 2669.73 1768.85 3118.64 3395.54 3286.66 1706.63 3506.86 2682.92 2977.80 2995.97 4473.27 1896.42 3549.48 2012.51 2174.02 1387.70 46 E7b_E8a KnownJunction 1 1039.52 7826.30 3268.66 2537.74 3766.73 4579.47 1733.12 2838.46 1749.23 3075.08 2734.64 3275.72 2273.71 3692.00 3764.02 5033.04 2468.63 6828.78 2032.25 4423.01 1910.09 2101.53 2255.72 47 ER8a ExonRegion 0 1020.55 5795.54 3378.49 2199.97 2688.89 3177.37 1127.13 3177.15 2165.45 3770.48 4075.47 2926.40 1887.10 3837.24 3724.68 4048.56 3241.34 5845.93 2681.89 3988.42 2270.29 2627.90 1905.62 48 E8a_E9a KnownJunction 0 0.00 3.35 0.00 0.00 0.00 5.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.81 0.00 0.00 0.00 49 E8a_E10a KnownJunction 0 1416.18 5841.46 2755.49 2038.80 2749.07 3163.92 1016.23 2468.71 1666.82 2957.34 2669.94 2146.45 1356.40 3924.21 2970.90 2159.43 2470.12 3077.66 1799.02 3172.79 1940.43 1520.18 1171.69 50 ER9a ExonRegion 0 0.00 3.50 0.03 1.36 0.00 2.46 3.89 0.00 0.00 0.00 1.93 7.74 0.00 5.25 6.67 8.98 0.00 0.24 3.19 8.15 2.30 4.12 0.00 51 E9a_E10a KnownJunction 0 0.00 2.89 0.00 1.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 ER10a ExonRegion 0 2272.99 7789.11 2033.52 1554.96 3111.69 3709.05 1279.82 2274.26 1405.42 2618.15 2916.16 2486.43 1669.35 2911.11 2647.32 2459.24 2606.43 2459.37 1597.52 2390.01 1526.90 1806.89 1218.51 53 E10_Da KnownBoundary 0 4487.02 11721.27 2109.30 1605.76 3553.23 3126.61 1397.35 2143.41 1340.93 2397.91 2476.94 1993.70 1426.37 1838.32 1730.89 1212.93 2042.17 885.28 718.04 2165.13 1138.68 1095.34 573.13 54 ER10b ExonRegion 0 2957.51 8254.11 3031.19 2295.41 3336.30 2893.36 1110.49 2332.93 1368.74 2448.61 2624.91 2554.39 1455.12 2162.92 3294.27 1920.11 2038.31 2240.71 1665.09 2515.48 1164.48 1686.29 916.76 55 E10_Db KnownBoundary 0 474.60 300.01 89.03 68.52 107.47 80.01 65.49 65.80 27.17 56.97 32.85 115.84 78.24 69.75 100.38 70.24 81.63 13.72 44.71 61.94 17.61 48.74 77.60 56 ER10c ExonRegion 0 39.38 36.99 17.28 25.29 23.43 18.07 8.11 23.04 12.90 20.46 12.22 14.35 11.66 10.43 15.36 16.12 12.47 6.58 8.21 32.03 3.61 14.74 12.29 57 IG19_AR5 ActiveIntergenicRegion 0 6.23 18.81 3.88 15.14 6.03 7.79 6.04 4.14 11.32 6.79 1.38 2.92 6.32 1.27 5.99 5.31 11.96 4.38 4.51 24.25 0.89 1.82 5.59