Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ALOX12 Gene 0 10.93 4.00 7.16 8.31 10.54 8.01 7.28 6.68 6.03 4.70 9.95 9.15 12.01 11.25 12.40 16.28 9.72 4.55 3.23 7.26 6.57 3.33 7.44 2 251535 Transcript 0 4.96 2.15 3.30 3.85 4.34 2.38 2.67 3.28 3.05 2.36 5.08 3.87 5.41 5.60 5.77 8.54 5.50 2.58 1.16 3.04 3.21 1.19 3.47 3 480801 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.76 0.00 4 406228 Transcript 0 10.27 4.24 16.56 16.14 23.13 34.21 16.58 8.77 8.41 4.43 9.82 9.31 6.65 6.42 10.28 6.25 5.86 4.08 4.99 10.85 2.73 4.79 8.73 5 ER1a ExonRegion 0 3.44 1.10 4.50 2.77 0.73 3.00 1.44 3.54 3.09 3.71 10.49 0.00 4.42 11.33 6.90 8.82 12.55 5.25 1.73 1.73 8.98 0.00 9.54 6 E1_Da NovelBoundary 0 3.63 0.00 6.92 5.26 0.00 2.27 2.12 6.49 3.04 8.49 10.90 0.00 6.33 14.07 4.45 34.95 4.11 5.93 0.00 2.75 5.68 2.88 11.78 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 Ix Intron 1 6.59 2.35 11.86 17.53 8.34 8.65 3.06 13.07 11.30 12.47 24.95 7.41 9.23 25.75 20.52 26.98 18.22 14.39 7.94 10.60 15.10 5.75 15.42 9 Ix_SR1 SilentIntronRegion 0 5.08 1.47 5.48 2.81 3.78 7.10 0.62 9.44 6.58 8.29 20.54 2.39 6.34 18.37 15.47 17.63 14.15 12.49 5.31 8.01 13.38 2.64 13.63 10 Ix_AR1 ActiveIntronRegion 0 7.51 2.88 15.64 26.19 11.03 9.59 4.50 15.24 14.11 14.98 27.64 10.37 10.97 30.18 23.57 32.56 20.68 15.57 9.51 12.17 16.19 7.59 16.55 11 E2_Aa NovelBoundary 0 17.19 13.94 19.13 29.00 31.24 5.34 11.44 25.88 13.08 15.37 30.43 0.00 27.27 19.78 15.08 20.85 22.44 13.60 3.86 12.14 17.36 3.00 11.44 12 ER2a ExonRegion 0 18.50 4.27 14.60 18.33 10.57 5.82 4.46 17.90 16.05 8.42 27.91 10.31 19.66 23.45 21.86 40.34 28.55 14.98 5.74 7.89 13.29 7.21 12.16 13 E2_Ab KnownBoundary 0 11.19 5.99 11.97 13.58 20.97 12.72 2.16 19.76 19.53 9.37 12.74 20.26 20.13 29.20 24.60 39.56 39.27 18.53 3.76 9.78 18.10 15.00 3.93 14 ER2b ExonRegion 0 5.41 1.22 2.72 5.06 5.59 6.64 1.09 7.41 6.26 3.67 7.86 4.43 19.07 17.76 20.05 17.70 20.39 2.79 12.46 3.92 8.67 5.56 1.17 15 E2_Da NovelBoundary 0 13.56 2.96 14.93 17.11 4.07 18.06 9.67 21.36 13.34 21.49 23.11 5.70 13.31 33.73 31.15 34.18 8.13 19.52 4.52 17.51 11.00 2.82 3.24 16 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 Ix Intron 0 55.97 14.24 22.06 31.74 42.75 17.66 21.56 26.50 16.52 17.13 34.53 29.18 65.08 24.44 29.72 53.48 29.77 16.45 9.48 19.56 7.14 6.29 18.64 18 Ix_SR1 SilentIntronRegion 0 56.55 14.40 22.30 32.04 43.24 17.85 21.78 26.77 16.69 17.32 34.86 29.51 65.75 24.68 30.02 54.02 30.03 16.63 9.59 19.78 7.18 6.35 18.81 19 E3_Aa NovelBoundary 0 76.46 2.89 18.69 8.79 32.26 8.35 6.40 12.45 6.45 9.29 20.95 5.70 45.45 16.66 34.98 36.32 24.68 6.55 18.82 2.75 3.15 0.00 12.55 20 ER3a ExonRegion 0 31.15 7.59 3.36 7.45 14.78 10.26 11.40 1.56 6.55 1.94 11.93 2.22 10.41 7.84 15.39 11.09 18.07 3.29 3.96 5.24 1.37 2.59 5.34 21 E3_Da NovelBoundary 0 149.73 18.62 7.51 23.77 73.68 57.01 34.62 14.75 17.25 12.22 14.74 12.30 63.31 46.74 31.65 167.82 25.53 18.99 25.04 17.77 11.74 14.45 72.47 22 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E4_Aa NovelBoundary 0 10.08 2.83 11.24 14.58 12.99 14.08 8.44 9.32 8.13 6.82 2.00 6.30 6.82 13.66 0.00 8.03 8.70 8.00 0.00 3.07 5.44 0.00 6.32 24 ER4a ExonRegion 0 5.42 4.22 6.86 8.41 11.23 3.04 5.03 4.33 4.78 3.72 4.84 8.66 17.62 10.72 16.35 16.02 11.03 5.42 5.28 8.79 6.41 3.69 7.35 25 E4_Da NovelBoundary 0 30.38 19.73 18.95 20.48 25.30 16.24 16.69 22.18 15.94 13.00 22.53 6.15 20.45 19.84 15.33 50.24 26.09 16.91 13.46 24.80 14.21 2.88 16.30 26 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E4a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.76 0.00 28 Ix Intron 0 12.20 2.71 6.48 14.41 11.87 5.69 5.28 6.85 8.16 4.55 13.72 15.02 10.03 11.35 12.03 36.91 13.17 7.34 2.83 13.21 9.77 3.70 13.02 29 Ix_SR1 SilentIntronRegion 0 12.42 2.75 6.59 14.64 12.08 5.79 5.38 6.97 8.29 4.62 13.94 15.25 10.21 11.54 12.22 37.53 13.38 7.47 2.88 13.44 9.93 3.76 13.25 30 E5_Aa NovelBoundary 0 10.52 2.43 28.89 26.20 12.48 9.65 14.40 9.65 25.09 18.00 31.43 6.30 6.82 14.01 28.80 19.14 41.05 15.67 8.47 5.56 5.44 5.63 3.41 31 ER5a ExonRegion 0 9.34 1.99 8.04 10.63 13.07 7.19 10.32 11.33 4.57 5.77 7.58 10.49 13.75 9.92 10.68 24.72 11.30 2.26 6.25 8.39 10.72 1.46 8.50 32 E5_Da NovelBoundary 0 18.97 3.35 19.57 15.62 20.12 8.18 4.11 15.85 16.00 13.40 21.43 5.85 6.17 33.14 35.73 50.24 39.46 21.43 0.00 18.92 8.65 6.25 11.10 33 E5a_E6a KnownJunction 0 0.00 0.00 0.00 1.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 34 Ix Intron 0 9.97 6.25 8.98 8.74 16.99 7.89 12.20 13.19 7.92 7.00 19.01 8.76 10.34 19.86 11.92 33.47 20.28 6.40 5.87 10.02 5.42 2.13 12.03 35 Ix_SR1 SilentIntronRegion 0 10.05 6.30 9.05 8.80 17.13 7.95 12.30 13.29 7.97 7.06 19.16 8.83 10.42 20.02 12.00 33.74 20.43 6.45 5.91 10.10 5.46 2.15 12.13 36 E6_Aa NovelBoundary 0 45.05 5.99 15.40 16.05 29.54 7.84 40.63 20.74 18.37 13.57 46.80 12.30 27.11 30.55 15.20 62.72 25.62 13.60 13.74 10.87 13.96 8.14 7.60 37 ER6a ExonRegion 0 21.02 2.44 13.37 8.18 18.27 3.95 9.83 12.30 13.31 8.54 20.26 3.37 25.34 14.68 24.91 38.15 21.39 4.02 1.38 8.65 12.80 1.20 9.46 38 E6_Ab KnownBoundary 0 19.63 3.35 11.12 16.88 3.23 7.44 6.27 19.02 20.43 13.78 14.53 0.00 6.66 14.77 14.59 40.07 31.04 5.47 0.00 13.81 16.99 3.12 18.78 39 ER6b ExonRegion 0 5.24 1.28 5.18 5.86 14.65 10.94 2.21 5.22 10.16 4.31 13.19 0.46 4.20 15.70 5.55 18.88 14.30 2.53 0.50 3.25 14.11 2.08 9.17 40 E6_Da NovelBoundary 0 24.45 9.34 16.00 17.68 7.81 2.38 16.38 17.74 6.60 4.24 26.85 31.51 21.91 26.78 35.35 52.64 16.83 16.91 4.80 8.63 11.86 16.29 16.22 41 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 Ix Intron 0 18.49 7.30 11.38 14.72 20.30 7.95 19.28 17.97 12.22 11.58 21.86 14.89 25.39 25.58 21.70 44.49 18.56 13.81 10.57 13.98 10.30 4.66 18.70 43 Ix_AR1 ActiveIntronRegion 0 17.27 6.49 9.82 13.17 26.96 7.55 15.19 9.19 9.62 7.94 26.59 8.22 25.78 19.69 23.92 57.07 12.73 10.37 10.89 6.69 11.39 0.82 4.94 44 Ix_SR1 SilentIntronRegion 0 18.78 7.47 11.71 15.06 19.11 8.05 20.11 19.68 12.74 12.30 21.04 16.19 25.40 26.77 21.34 42.25 19.71 14.50 10.54 15.40 10.12 5.39 21.34 45 E7_Aa NovelBoundary 0 33.41 11.71 11.62 7.19 30.90 30.04 22.92 29.08 16.38 9.99 20.90 5.70 6.82 26.43 28.31 20.76 20.57 9.00 7.06 7.80 0.00 0.00 15.79 46 ER7a ExonRegion 0 16.40 6.84 7.45 3.86 5.91 8.20 7.57 4.90 4.20 6.98 13.98 12.73 10.29 30.20 15.00 29.06 9.51 4.47 1.14 11.34 8.39 3.17 12.27 47 E7_Da NovelBoundary 0 41.56 3.29 8.60 8.89 7.56 5.05 8.61 6.70 10.68 4.24 18.22 0.00 6.82 26.78 9.64 12.22 7.85 12.23 4.71 9.52 9.27 0.00 4.35 48 E7_Db NovelBoundary 0 9.19 2.83 4.82 9.02 11.12 14.03 13.16 8.09 4.92 10.21 12.53 12.45 12.82 7.18 18.54 20.68 17.67 6.30 12.99 18.09 2.72 0.00 8.45 49 E7b_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 ER7b ExonRegion 0 6.35 0.00 1.35 0.00 3.75 2.57 0.93 3.11 0.74 2.41 1.55 2.16 0.47 8.45 3.19 3.86 6.60 5.73 0.00 1.49 0.00 1.46 2.35 51 Ix Intron 0 13.80 4.72 6.03 6.89 17.21 10.65 11.12 4.37 6.41 5.19 8.46 16.38 15.20 18.49 13.02 20.71 9.43 7.80 1.71 9.12 6.89 2.05 8.66 52 Ix_SR1 SilentIntronRegion 0 19.38 6.57 6.23 9.48 26.42 15.48 16.17 4.62 9.91 6.45 10.41 23.83 13.18 21.62 13.15 24.02 9.48 7.26 2.29 10.70 6.73 2.99 10.02 53 Ix_AR1 ActiveIntronRegion 0 8.33 2.91 5.88 4.36 8.14 5.91 6.16 4.15 2.96 3.97 6.57 9.07 17.33 15.51 12.98 17.54 9.45 8.38 1.14 7.61 7.10 1.12 7.36 54 E8_Aa NovelBoundary 0 19.56 0.00 5.71 15.12 14.94 7.55 16.83 11.21 8.33 14.85 17.79 18.61 12.99 17.13 14.71 40.84 17.11 18.94 0.00 14.32 8.46 3.00 27.40 55 ER8a ExonRegion 0 7.22 3.17 3.78 9.89 13.51 4.95 6.39 3.61 5.33 6.28 9.78 22.29 18.07 18.74 8.63 24.37 7.25 8.66 2.32 6.13 4.28 2.46 9.93 56 E8_Da NovelBoundary 0 10.45 3.22 13.93 10.59 32.43 5.11 17.14 8.79 11.11 6.26 7.58 25.21 6.82 33.79 8.90 12.39 12.90 11.90 0.00 9.40 4.94 5.08 24.84 57 E8a_E9a KnownJunction 0 0.00 3.35 1.83 0.00 3.23 5.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 Ix Intron 0 14.08 6.77 6.48 10.81 26.11 11.79 14.39 4.57 5.31 9.10 7.29 36.31 23.98 13.37 8.78 20.43 10.25 3.05 1.41 9.91 0.98 4.16 7.16 59 Ix_AR1 ActiveIntronRegion 0 14.20 6.83 6.54 10.90 26.33 11.90 14.51 4.61 5.35 9.18 7.35 36.63 24.19 13.48 8.86 20.61 10.34 3.08 1.43 9.99 0.99 4.19 7.21 60 E9_Aa NovelBoundary 0 6.89 3.03 10.32 3.70 10.44 0.00 1.63 9.49 3.01 4.86 2.37 18.16 0.00 7.65 6.18 8.29 14.03 3.56 9.60 15.02 0.00 0.00 12.21 61 ER9a ExonRegion 0 1.24 4.28 1.62 4.61 6.49 1.94 3.83 0.00 2.09 0.88 3.40 8.36 6.79 3.75 10.60 1.84 2.05 0.08 0.00 7.46 0.00 0.00 3.34 62 E9_Da NovelBoundary 0 2.96 6.25 13.13 21.64 11.12 11.02 8.66 6.04 1.48 6.02 2.68 5.85 0.00 4.94 6.30 11.79 13.09 4.64 0.00 8.69 11.98 0.00 4.01 63 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64 ER10a ExonRegion 0 3.85 5.13 3.33 2.63 0.90 1.65 1.22 0.77 0.65 0.51 0.61 4.28 3.48 2.74 5.27 1.78 0.93 1.65 0.96 1.99 2.64 0.63 0.00 65 E10_Da NovelBoundary 0 11.11 3.16 4.49 1.76 15.96 0.00 2.25 0.00 0.00 2.66 0.00 0.00 12.34 0.00 8.90 0.00 4.77 2.49 9.60 2.68 3.15 0.00 0.00 66 E10a_E11a KnownJunction 0 3.70 6.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 67 E11_Aa NovelBoundary 0 17.34 3.35 4.52 5.83 7.72 2.90 9.89 8.67 0.00 1.53 2.68 5.70 0.00 6.95 9.64 3.50 8.23 14.59 0.00 0.00 5.37 5.82 0.00 68 ER11a ExonRegion 0 9.68 4.78 3.76 6.59 3.22 3.83 4.71 3.23 6.03 3.56 4.80 4.47 0.00 2.21 5.99 1.24 2.81 1.15 1.33 7.90 1.84 2.61 3.68 69 E11_Da NovelBoundary 0 6.22 2.70 6.24 8.72 3.23 4.88 3.71 6.49 1.22 6.39 14.53 5.85 0.00 2.47 14.83 7.52 3.65 4.77 3.95 6.26 3.09 2.45 0.00 70 E11a_E12b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 71 E12_Aa NovelBoundary 0 3.41 18.35 8.22 25.01 22.33 2.78 14.18 12.28 7.06 12.03 12.90 24.61 35.55 4.94 4.45 4.19 3.83 3.98 0.00 5.62 0.00 0.00 3.93 72 ER12a ExonRegion 0 10.27 4.24 16.56 16.14 23.13 34.21 16.58 8.77 8.41 4.43 9.82 9.31 6.65 6.42 10.28 6.25 5.86 4.08 4.99 10.85 2.73 4.79 8.73 73 E12_Ab KnownBoundary 0 7.19 5.66 17.83 12.29 42.70 13.34 10.29 5.59 10.53 6.66 2.11 11.40 20.13 2.35 8.90 4.19 0.00 9.58 0.00 9.65 8.03 4.90 0.00 74 ER12b ExonRegion 0 6.86 3.50 9.26 6.27 9.69 3.04 6.67 4.87 7.32 4.21 5.12 1.21 8.54 4.03 6.70 12.60 3.27 6.78 1.69 13.21 4.17 4.58 2.85 75 E12_Da NovelBoundary 0 22.15 20.26 50.86 37.16 16.30 2.67 5.87 56.97 43.26 27.53 130.66 12.15 13.31 58.45 33.62 45.46 161.85 19.73 36.52 38.41 63.94 22.04 27.57 76 E12a_E13a KnownJunction 0 0.00 0.00 0.00 3.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 77 E13_Aa NovelBoundary 0 14.97 3.35 4.82 6.99 4.16 0.00 5.87 2.55 7.38 1.48 4.95 12.15 19.80 12.30 9.52 11.19 4.39 6.63 0.00 5.43 8.34 0.00 10.93 78 ER13a ExonRegion 0 7.62 1.83 2.69 4.09 3.19 3.28 4.74 2.31 1.66 2.55 3.46 5.32 6.91 4.75 9.33 8.85 4.98 2.20 0.95 8.16 4.60 0.62 4.33 79 E13_Da NovelBoundary 0 17.48 2.43 6.86 4.86 8.40 2.73 5.92 4.11 1.48 3.76 18.69 6.30 6.82 4.94 14.34 24.35 15.61 1.91 4.05 10.80 2.66 2.94 8.45 80 E13a_E14a KnownJunction 0 0.00 0.00 0.00 4.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 81 Ix Intron 0 18.45 2.66 3.18 2.66 9.33 4.80 6.35 3.37 0.00 3.72 2.53 12.77 10.46 8.62 7.81 6.48 2.88 0.81 5.55 6.49 5.76 4.54 7.68 82 Ix_SR1 SilentIntronRegion 0 20.14 2.96 3.43 2.96 10.40 5.19 6.95 3.62 0.00 4.00 2.80 14.23 11.35 9.48 8.70 7.22 3.21 0.90 6.19 7.07 6.42 5.06 7.94 83 E14_Aa NovelBoundary 0 16.82 8.22 5.59 16.12 36.84 2.90 18.15 14.25 10.07 8.68 8.58 0.00 19.32 13.71 10.51 21.45 3.55 3.56 3.48 4.86 2.66 10.78 11.52 84 ER14a ExonRegion 0 15.75 5.47 6.44 9.00 13.29 6.83 10.14 10.39 5.90 5.83 11.20 15.34 18.66 10.95 16.57 18.76 8.86 3.42 4.61 7.06 8.66 6.25 8.52