Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C17orf85 Gene 0 73.96 121.42 64.05 91.00 134.29 213.47 105.45 107.57 127.97 147.57 161.47 141.60 108.21 160.66 87.12 115.55 131.45 130.23 49.41 120.02 93.08 95.82 81.77 2 158149 Transcript 0 3.01 3.28 3.24 1.57 6.37 17.37 3.06 2.29 4.05 3.03 12.22 8.39 7.45 9.95 8.69 3.57 4.32 3.86 4.68 7.20 0.18 1.69 7.17 3 433699 Transcript 0 32.21 24.87 3.89 11.42 32.01 38.76 17.31 16.04 12.20 16.25 17.00 27.24 34.15 20.97 9.77 18.23 14.97 12.21 4.70 19.41 5.43 10.42 8.06 4 389005 Transcript 0 28.38 116.43 110.61 104.65 245.33 188.58 177.36 137.56 178.04 202.89 267.70 359.82 345.43 176.06 162.80 169.96 178.21 117.69 32.47 129.56 28.48 108.20 61.29 5 ER1a ExonRegion 1 9.15 18.03 15.90 9.89 9.73 47.43 17.34 25.26 35.18 53.87 116.40 8.87 21.61 45.22 35.39 39.88 111.17 38.69 18.06 51.19 93.94 24.64 37.04 6 E1a_E2a KnownJunction 1 3.78 17.56 47.51 42.72 11.46 32.20 7.99 72.54 93.81 133.88 230.48 29.71 46.59 197.19 81.96 117.92 179.99 175.60 65.23 127.13 134.00 61.72 110.89 7 ER2a ExonRegion 0 5.32 32.20 57.41 39.07 41.80 50.54 29.67 92.03 131.11 151.91 199.91 87.84 63.24 212.69 118.78 239.98 170.95 274.89 108.93 135.72 116.63 134.07 178.78 8 E2_Da NovelBoundary 0 3.11 2.50 20.52 7.26 3.57 0.00 2.25 4.31 4.86 6.53 0.00 0.00 0.00 2.47 14.09 0.00 8.42 2.24 0.00 5.62 2.66 0.00 0.00 9 E2a_E3a KnownJunction 0 11.19 59.46 46.21 40.65 38.12 145.77 45.93 131.11 183.22 173.69 252.27 82.68 85.55 155.93 86.53 255.66 251.43 256.72 71.44 184.27 129.73 66.07 234.49 10 ER3a ExonRegion 0 13.36 46.48 46.44 43.61 78.88 236.30 83.20 95.21 144.62 145.97 198.76 132.05 130.79 173.75 68.59 121.80 181.67 144.12 39.97 118.45 131.85 64.41 95.44 11 E3_Da NovelBoundary 0 3.26 26.90 12.68 9.46 12.05 2.10 17.97 34.87 7.58 22.40 24.43 30.91 12.99 14.19 18.17 19.82 22.16 11.90 0.00 3.26 0.00 0.00 7.26 12 E3a_E4a KnownJunction 0 17.26 85.77 63.72 62.86 104.84 384.15 117.12 102.77 195.66 210.25 231.32 185.31 206.16 216.20 107.79 105.27 210.57 217.88 50.35 130.58 118.49 61.11 89.46 13 Ix_SR3 SilentIntronRegion 0 7.74 9.29 7.20 6.77 11.02 5.14 8.15 18.10 9.48 13.72 17.69 16.85 7.11 17.09 19.28 19.43 25.80 9.46 5.30 13.36 3.22 10.46 5.70 14 Ix_AR3 ActiveIntronRegion 0 7.72 10.56 6.22 1.39 11.70 7.10 6.66 6.25 8.25 11.42 19.97 8.91 10.57 8.30 18.13 9.88 19.45 2.93 2.08 9.85 2.91 6.60 6.78 15 ER4a ExonRegion 0 49.17 115.67 68.91 65.38 84.43 213.27 85.36 107.74 170.58 169.10 282.94 232.90 221.03 308.66 125.10 148.21 254.46 166.97 67.47 177.78 164.40 112.05 82.76 16 E4a_E5a KnownJunction 0 60.53 113.66 84.33 75.65 152.63 221.18 126.44 106.79 155.53 166.60 232.01 224.77 221.58 267.29 73.18 113.22 188.59 141.48 56.47 166.70 147.15 108.93 73.92 17 ER5a ExonRegion 0 42.58 97.67 69.53 80.79 149.70 165.81 117.16 115.70 158.63 167.07 227.35 310.08 239.88 264.38 109.48 155.82 223.23 157.00 60.37 180.64 159.73 108.97 98.84 18 E5a_E6a KnownJunction 0 62.38 205.69 67.50 119.43 240.92 269.45 154.66 140.68 175.23 183.12 325.77 310.60 328.39 324.15 136.72 225.92 250.86 145.29 73.70 222.11 182.68 163.68 118.65 19 ER6a ExonRegion 0 49.39 133.03 76.04 100.92 169.61 236.16 117.32 130.02 177.95 182.33 299.50 286.31 336.34 282.26 117.56 176.82 230.16 141.80 91.34 185.93 122.95 149.12 79.29 20 E6a_E7a KnownJunction 0 37.04 147.74 63.60 90.53 213.16 196.25 142.25 122.61 178.15 178.47 222.64 330.71 271.74 249.46 114.47 91.09 204.67 133.98 101.18 173.15 90.50 157.19 120.45 21 ER7a ExonRegion 0 41.13 131.70 76.36 106.81 208.39 245.96 176.54 133.01 196.00 195.53 280.09 347.75 300.85 218.02 108.52 145.06 209.11 121.32 67.10 210.03 87.72 142.46 97.23 22 E7_Da NovelBoundary 1 29.26 67.82 11.35 51.68 62.22 145.31 74.24 54.30 85.73 61.51 64.81 136.24 69.96 88.59 4.45 58.62 50.86 18.61 34.35 58.80 20.32 95.22 50.53 23 E7a_E8a KnownJunction 0 6.67 5.72 6.42 1.33 4.07 33.39 4.20 6.24 7.49 7.25 20.01 12.30 15.10 14.66 11.37 6.75 4.68 6.05 9.60 8.12 0.00 3.06 7.51 24 E7a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E7a_E9b KnownJunction 0 28.38 116.43 110.61 104.65 245.33 188.58 177.36 137.56 178.04 202.89 267.70 359.82 345.43 176.06 162.80 169.96 178.21 117.69 32.47 129.56 28.48 108.20 61.29 26 Ix Intron 0 15.29 29.39 10.35 33.66 41.70 75.86 37.51 20.08 37.81 38.50 41.62 98.24 95.48 47.04 17.09 16.84 22.45 9.02 10.38 49.73 10.30 57.85 19.55 27 Ix_AR1 ActiveIntronRegion 0 15.33 29.46 10.38 33.76 41.81 76.06 37.62 20.13 37.91 38.61 41.72 98.52 95.75 47.16 17.13 16.88 22.51 9.04 10.39 49.87 10.33 58.01 19.61 28 E8_Aa NovelBoundary 1 11.04 46.37 12.51 32.26 28.86 92.16 31.27 15.90 25.20 26.14 37.59 170.76 179.70 56.33 27.44 57.25 40.02 17.99 0.00 48.00 22.98 27.74 21.17 29 ER8a ExonRegion 0 2.37 4.13 3.30 1.65 6.81 16.56 2.73 0.63 2.25 1.84 12.24 12.86 7.25 10.24 9.50 3.96 3.90 3.42 4.44 6.96 0.53 2.02 5.96 30 E8_Da NovelBoundary 1 92.02 103.99 26.37 54.87 73.34 180.80 41.25 47.44 61.17 54.53 58.59 121.54 101.13 86.70 18.30 60.92 59.09 48.04 52.61 81.37 40.34 67.54 50.62 31 E8a_E9b KnownJunction 0 0.00 0.00 0.00 1.73 8.23 2.16 2.25 0.00 2.40 0.00 4.42 0.00 0.00 4.94 5.19 0.00 4.39 2.11 0.00 6.52 0.00 0.00 8.02 32 Ix Intron 0 45.97 72.10 13.94 56.51 64.80 120.50 56.68 38.43 54.15 52.65 57.13 93.46 88.00 55.21 23.66 36.09 46.27 25.98 18.79 63.78 30.87 51.04 31.38 33 Ix_AR1 ActiveIntronRegion 0 46.03 72.20 13.96 56.59 64.89 120.66 56.76 38.48 54.23 52.73 57.21 93.59 88.12 55.29 23.69 36.14 46.33 26.01 18.81 63.87 30.91 51.11 31.42 34 E9_Aa NovelBoundary 1 129.95 71.70 15.79 73.82 125.81 267.12 137.21 18.40 40.83 63.53 76.65 110.59 122.56 69.75 39.19 81.86 52.08 33.74 22.59 83.92 19.89 54.50 34.32 35 ER9a ExonRegion 1 64.42 49.75 7.77 22.84 64.02 77.51 34.62 32.08 24.40 32.50 33.99 54.49 68.29 41.95 19.53 36.46 29.95 24.43 9.40 38.82 10.86 20.84 16.12 36 E9_Ab KnownBoundary 1 150.99 120.70 21.38 78.58 123.01 197.27 75.78 58.61 56.86 64.95 66.23 88.23 117.69 74.52 28.06 66.73 52.08 39.13 21.65 81.94 26.19 42.07 31.58 37 ER9b ExonRegion 0 119.42 189.88 110.93 176.24 266.20 318.23 212.26 164.29 204.14 244.48 317.13 326.37 334.41 285.06 148.78 202.34 209.39 177.44 73.81 204.45 98.94 149.91 115.60 38 E9a_E10a KnownJunction 1 149.66 174.51 99.73 151.86 255.18 325.38 201.34 133.82 208.10 206.22 186.10 263.04 326.11 259.17 110.88 139.62 207.67 141.31 61.18 204.60 86.80 136.61 89.03 39 ER10a ExonRegion 0 116.37 166.26 104.50 152.42 163.30 242.63 151.59 138.71 176.42 214.59 250.53 326.62 215.74 246.21 115.60 185.47 247.85 228.09 61.35 179.85 160.57 123.67 127.52 40 E10a_E11a KnownJunction 0 143.95 212.92 95.92 122.30 266.38 256.05 241.61 113.78 139.67 199.10 285.07 391.33 328.23 324.74 170.96 256.09 202.99 197.32 76.52 178.78 128.56 111.81 111.40 41 ER11a ExonRegion 0 100.40 129.78 75.52 116.11 163.39 277.99 135.21 118.48 144.25 189.05 220.62 201.98 172.62 220.72 123.76 153.52 191.00 170.36 61.00 137.95 127.93 125.61 102.46 42 E11a_E12a KnownJunction 0 147.51 150.89 113.12 191.42 265.45 322.03 132.71 215.97 237.61 291.69 267.28 275.94 332.28 281.30 202.73 310.86 233.85 245.24 79.81 181.72 120.59 179.97 169.36 43 ER12a ExonRegion 0 107.78 140.68 99.67 152.86 191.48 322.84 149.44 176.99 203.10 250.67 260.47 215.58 150.32 233.95 133.31 191.87 203.59 211.49 69.09 138.45 133.36 145.79 135.29 44 E12a_E13a KnownJunction 0 134.32 161.09 105.70 203.10 186.93 296.14 146.66 199.99 198.06 234.64 196.52 183.96 155.02 372.54 179.25 156.71 157.18 248.72 83.01 118.18 198.92 135.08 99.36 45 ER13a ExonRegion 0 142.03 170.53 116.91 143.62 200.09 350.22 128.55 144.71 177.39 212.88 220.97 202.12 100.03 252.94 116.93 191.74 196.02 219.95 76.78 156.58 166.73 127.24 141.38 46 E13a_E14a KnownJunction 0 236.41 265.35 160.14 190.45 283.02 491.48 190.34 165.65 192.97 236.76 241.11 171.66 82.95 323.92 161.32 199.01 277.42 244.08 154.08 181.97 179.59 169.56 192.66 47 ER14a ExonRegion 0 76.95 130.28 57.65 87.33 131.27 205.42 100.24 103.46 112.68 128.46 113.03 92.10 58.48 120.46 73.46 89.34 84.75 108.44 41.40 101.80 66.93 85.60 67.71